RNA–Protein interactions for RNA: ENST00000462156.1

SP140L-206, Transcript of SP140 nuclear body protein like, humanhuman

TSL 3

Gene SP140L, Length 292 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140L-206ENST00000462156 AEBP2Q6ZN18 517 aaPredicted RBP23.51■■□□□ 1.35
SP140L-206ENST00000462156 CHIC1Q5VXU3 224 aa22.12■■□□□ 1.13
SP140L-206ENST00000462156 SENP3Q9H4L4 574 aaPredicted RBP19.98■□□□□ 0.79
SP140L-206ENST00000462156 PHF23Q9BUL5 403 aaPredicted RBP19.74■□□□□ 0.75
SP140L-206ENST00000462156 FOXD1Q16676 465 aa18.7■□□□□ 0.58
SP140L-206ENST00000462156 PLPPR3Q6T4P5 718 aa17.55■□□□□ 0.4
SP140L-206ENST00000462156 MSH5O43196 834 aa17.48■□□□□ 0.39
SP140L-206ENST00000462156 PPP6R1Q9UPN7 881 aa17.41■□□□□ 0.38
SP140L-206ENST00000462156 POTEDQ86YR6 584 aa17.38■□□□□ 0.37
SP140L-206ENST00000462156 PIAS4Q8N2W9 510 aaPredicted RBP17.38■□□□□ 0.37
SP140L-206ENST00000462156 ADRA2BP18089 450 aa17.31■□□□□ 0.36
SP140L-206ENST00000462156 MAPK8IP2Q13387 824 aaPredicted RBP15.96■□□□□ 0.15
SP140L-206ENST00000462156 DMRT2Q9Y5R5 561 aa15.85■□□□□ 0.13
SP140L-206ENST00000462156 SCAF1Q9H7N4 1312 aaKnown RBP15.73■□□□□ 0.11
SP140L-206ENST00000462156 PPP4R3CPQ6ZMV5 832 aa15.4■□□□□ 0.06
SP140L-206ENST00000462156 HOXD11P31277 338 aaPredicted RBP15.22■□□□□ 0.03
SP140L-206ENST00000462156 DCAF8L1A6NGE4 600 aa15.13■□□□□ 0.01
SP140L-206ENST00000462156 CNKSR2Q8WXI2 1034 aa15.12■□□□□ 0.01
SP140L-206ENST00000462156 CACNB1Q02641 598 aaPredicted RBP15.09■□□□□ 0.01
SP140L-206ENST00000462156 RNF216Q9NWF9 866 aaPredicted RBP15.04■□□□□ -0
SP140L-206ENST00000462156 RNF39Q9H2S5 420 aa14.96□□□□□ -0.01
SP140L-206ENST00000462156 DNAJC5BQ9UF47 199 aa14.71□□□□□ -0.05
SP140L-206ENST00000462156 NCBP3Q53F19 620 aaKnown RBP14.7□□□□□ -0.06
SP140L-206ENST00000462156 C1QBPQ07021 282 aaKnown RBP14.69□□□□□ -0.06
SP140L-206ENST00000462156 NPM3O75607 178 aaKnown RBP14.56□□□□□ -0.08
SP140L-206ENST00000462156 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.44□□□□□ -0.11e-6■■■■□ 21.9
SP140L-206ENST00000462156 U3KPZ7 1027 aaPredicted RBP14.19□□□□□ -0.14
SP140L-206ENST00000462156 KCNA4P22459 653 aa14.17□□□□□ -0.14
SP140L-206ENST00000462156 SPINK5Q9NQ38 1064 aaPredicted RBP14.03□□□□□ -0.16
SP140L-206ENST00000462156 SLC4A2P04920 1241 aa13.99□□□□□ -0.17
SP140L-206ENST00000462156 DSG3P32926 999 aa13.96□□□□□ -0.17
SP140L-206ENST00000462156 CAPN15O75808 1086 aa13.94□□□□□ -0.18
SP140L-206ENST00000462156 TRHP20396 242 aaPredicted RBP13.69□□□□□ -0.22
SP140L-206ENST00000462156 APLP2Q06481 763 aa13.64□□□□□ -0.23
SP140L-206ENST00000462156 ZNF219Q9P2Y4 722 aaPredicted RBP13.64□□□□□ -0.23
SP140L-206ENST00000462156 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.63□□□□□ -0.23
SP140L-206ENST00000462156 ABCB7O75027 752 aa13.63□□□□□ -0.23
SP140L-206ENST00000462156 HNRNPUL2Q1KMD3 747 aaKnown RBP13.63□□□□□ -0.23
SP140L-206ENST00000462156 POTEHQ6S545 545 aa13.57□□□□□ -0.24
SP140L-206ENST00000462156 SAMD1Q6SPF0 538 aaPredicted RBP13.56□□□□□ -0.24
SP140L-206ENST00000462156 MYCNP04198 464 aaPredicted RBP13.43□□□□□ -0.26
SP140L-206ENST00000462156 POLA2Q14181 598 aa13.31□□□□□ -0.28
SP140L-206ENST00000462156 SLC4A1APQ9BWU0 796 aaKnown RBP13.28□□□□□ -0.28
SP140L-206ENST00000462156 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
SP140L-206ENST00000462156 FOXD4L1Q9NU39 408 aa13.21□□□□□ -0.29
SP140L-206ENST00000462156 ATF5Q9Y2D1 282 aaPredicted RBP13.21□□□□□ -0.29
SP140L-206ENST00000462156 CHRDL2Q6WN34 429 aa13.07□□□□□ -0.32
SP140L-206ENST00000462156 ZBTB22O15209 634 aa13.06□□□□□ -0.32
SP140L-206ENST00000462156 ZBTB12Q9Y330 459 aaPredicted RBP12.97□□□□□ -0.33
SP140L-206ENST00000462156 AKT1S1Q96B36 256 aa12.94□□□□□ -0.34
SP140L-206ENST00000462156 OSCARQ8IYS5 282 aa12.89□□□□□ -0.35
SP140L-206ENST00000462156 REM2Q8IYK8 340 aaPredicted RBP12.85□□□□□ -0.35
SP140L-206ENST00000462156 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
SP140L-206ENST00000462156 PIP4P2Q8N4L2 257 aa12.75□□□□□ -0.37
SP140L-206ENST00000462156 PITPNM1O00562 1244 aa12.72□□□□□ -0.37
SP140L-206ENST00000462156 FXR2P51116 673 aaKnown RBP eCLIP12.65□□□□□ -0.38
SP140L-206ENST00000462156 SP7Q8TDD2 431 aaPredicted RBP12.64□□□□□ -0.39
SP140L-206ENST00000462156 SPDYE2BA6NHP3 402 aa12.6□□□□□ -0.39
SP140L-206ENST00000462156 SPDYE6P0CI01 402 aa12.6□□□□□ -0.39
SP140L-206ENST00000462156 MKRN4PQ13434 485 aaPredicted RBP12.6□□□□□ -0.39
SP140L-206ENST00000462156 SPDYE2Q495Y8 402 aa12.6□□□□□ -0.39
SP140L-206ENST00000462156 FBLN2P98095 1184 aa12.58□□□□□ -0.4
SP140L-206ENST00000462156 HAX1O00165 279 aa12.5□□□□□ -0.41
SP140L-206ENST00000462156 SSUH2Q9Y2M2 353 aa12.45□□□□□ -0.42
SP140L-206ENST00000462156 EVX2Q03828 476 aa12.44□□□□□ -0.42
SP140L-206ENST00000462156 ZNF692Q9BU19 519 aaPredicted RBP12.41□□□□□ -0.42
SP140L-206ENST00000462156 SPDYE1Q8NFV5 336 aaPredicted RBP12.4□□□□□ -0.42
SP140L-206ENST00000462156 CLEC11AQ9Y240 323 aa12.37□□□□□ -0.43
SP140L-206ENST00000462156 PRKAR2AP13861 404 aaKnown RBP12.36□□□□□ -0.43
SP140L-206ENST00000462156 CSRNP3Q8WYN3 585 aa12.29□□□□□ -0.44
SP140L-206ENST00000462156 C19orf67A6NJJ6 358 aa12.25□□□□□ -0.45
SP140L-206ENST00000462156 PABPN1Q86U42 306 aaKnown RBP eCLIP12.24□□□□□ -0.45
SP140L-206ENST00000462156 CHADLQ6NUI6 762 aa12.21□□□□□ -0.45
SP140L-206ENST00000462156 PRR29P0C7W0 189 aa12.15□□□□□ -0.46
SP140L-206ENST00000462156 GABBR2O75899 941 aa12.1□□□□□ -0.47
SP140L-206ENST00000462156 FARP1Q9Y4F1 1045 aaPredicted RBP12.01□□□□□ -0.49
SP140L-206ENST00000462156 EHMT2Q96KQ7 1210 aa11.98□□□□□ -0.49
SP140L-206ENST00000462156 CD44P16070 742 aaKnown RBP11.94□□□□□ -0.5
SP140L-206ENST00000462156 POTEIP0CG38 1075 aa11.89□□□□□ -0.51
SP140L-206ENST00000462156 CREBZFQ9NS37 354 aa11.88□□□□□ -0.51
SP140L-206ENST00000462156 SPDYE4A6NLX3 237 aa11.85□□□□□ -0.51
SP140L-206ENST00000462156 LHX8Q68G74 356 aa11.85□□□□□ -0.51
SP140L-206ENST00000462156 STAG3Q9UJ98 1225 aa11.83□□□□□ -0.52
SP140L-206ENST00000462156 CLCN6P51797 869 aa11.78□□□□□ -0.52
SP140L-206ENST00000462156 ZNF579Q8NAF0 562 aaKnown RBP11.78□□□□□ -0.52
SP140L-206ENST00000462156 ZRANB1Q9UGI0 708 aa11.75□□□□□ -0.53
SP140L-206ENST00000462156 MNX1P50219 401 aaPredicted RBP11.7□□□□□ -0.54
SP140L-206ENST00000462156 GALR2O43603 387 aaPredicted RBP11.67□□□□□ -0.54
SP140L-206ENST00000462156 DCBLD2Q96PD2 775 aa11.67□□□□□ -0.54
SP140L-206ENST00000462156 PROM2Q8N271 834 aa11.61□□□□□ -0.55
SP140L-206ENST00000462156 PHF12Q96QT6 1004 aa11.61□□□□□ -0.55
SP140L-206ENST00000462156 NPM1P06748 294 aaKnown RBP eCLIP11.57□□□□□ -0.56
SP140L-206ENST00000462156 PAK3O75914 559 aaPredicted RBP11.55□□□□□ -0.56
SP140L-206ENST00000462156 POTEB2H3BUK9 544 aa11.5□□□□□ -0.57
SP140L-206ENST00000462156 PELP1Q8IZL8 1130 aaKnown RBP11.49□□□□□ -0.57
SP140L-206ENST00000462156 OTUD5Q96G74 571 aa11.46□□□□□ -0.57
SP140L-206ENST00000462156 MS4A3Q96HJ5 214 aa11.44□□□□□ -0.58
SP140L-206ENST00000462156 ASTLQ6HA08 431 aaPredicted RBP11.41□□□□□ -0.58
SP140L-206ENST00000462156 TSPYL2Q9H2G4 693 aaPredicted RBP11.4□□□□□ -0.58
SP140L-206ENST00000462156 CCDC61Q9Y6R9 512 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms