RNA–Protein interactions for RNA: ENST00000462063.1

CCDC30-204, Transcript of coiled-coil domain containing 30, humanhuman

TSL 3

Gene CCDC30, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-204ENST00000462063 AEBP2Q6ZN18 517 aaPredicted RBP22.09■■□□□ 1.13
CCDC30-204ENST00000462063 CHIC1Q5VXU3 224 aa20.75■□□□□ 0.91
CCDC30-204ENST00000462063 SENP3Q9H4L4 574 aaPredicted RBP18.88■□□□□ 0.61
CCDC30-204ENST00000462063 PHF23Q9BUL5 403 aaPredicted RBP18.63■□□□□ 0.57
CCDC30-204ENST00000462063 POTEDQ86YR6 584 aa18.19■□□□□ 0.5
CCDC30-204ENST00000462063 FOXD1Q16676 465 aa17.64■□□□□ 0.41
CCDC30-204ENST00000462063 MSH5O43196 834 aa16.58■□□□□ 0.24
CCDC30-204ENST00000462063 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
CCDC30-204ENST00000462063 PIAS4Q8N2W9 510 aaPredicted RBP16.46■□□□□ 0.23
CCDC30-204ENST00000462063 PPP6R1Q9UPN7 881 aa16.33■□□□□ 0.2
CCDC30-204ENST00000462063 ADRA2BP18089 450 aa16.29■□□□□ 0.2
CCDC30-204ENST00000462063 MAPK8IP2Q13387 824 aaPredicted RBP15.04■□□□□ -0
CCDC30-204ENST00000462063 DMRT2Q9Y5R5 561 aa14.92□□□□□ -0.02
CCDC30-204ENST00000462063 SCAF1Q9H7N4 1312 aaKnown RBP14.89□□□□□ -0.03
CCDC30-204ENST00000462063 CACNB1Q02641 598 aaPredicted RBP14.85□□□□□ -0.03
CCDC30-204ENST00000462063 DCAF8L1A6NGE4 600 aa14.46□□□□□ -0.09
CCDC30-204ENST00000462063 PPP4R3CPQ6ZMV5 832 aa14.45□□□□□ -0.1
CCDC30-204ENST00000462063 HOXD11P31277 338 aaPredicted RBP14.27□□□□□ -0.13
CCDC30-204ENST00000462063 CNKSR2Q8WXI2 1034 aa14.21□□□□□ -0.13
CCDC30-204ENST00000462063 RNF216Q9NWF9 866 aaPredicted RBP14.12□□□□□ -0.15
CCDC30-204ENST00000462063 RNF39Q9H2S5 420 aa14.11□□□□□ -0.15
CCDC30-204ENST00000462063 POTEHQ6S545 545 aa13.99□□□□□ -0.17
CCDC30-204ENST00000462063 C1QBPQ07021 282 aaKnown RBP13.9□□□□□ -0.18
CCDC30-204ENST00000462063 NCBP3Q53F19 620 aaKnown RBP13.83□□□□□ -0.2
CCDC30-204ENST00000462063 DNAJC5BQ9UF47 199 aa13.76□□□□□ -0.21
CCDC30-204ENST00000462063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCDC30-204ENST00000462063 NPM3O75607 178 aaKnown RBP13.61□□□□□ -0.23
CCDC30-204ENST00000462063 U3KPZ7 1027 aaPredicted RBP13.32□□□□□ -0.28
CCDC30-204ENST00000462063 CAPN15O75808 1086 aa13.25□□□□□ -0.29
CCDC30-204ENST00000462063 SPINK5Q9NQ38 1064 aaPredicted RBP13.23□□□□□ -0.29
CCDC30-204ENST00000462063 KCNA4P22459 653 aa13.17□□□□□ -0.3
CCDC30-204ENST00000462063 DSG3P32926 999 aa13.16□□□□□ -0.3
CCDC30-204ENST00000462063 SLC4A2P04920 1241 aa13.04□□□□□ -0.32
CCDC30-204ENST00000462063 TRHP20396 242 aaPredicted RBP13□□□□□ -0.33
CCDC30-204ENST00000462063 ABCB7O75027 752 aa12.93□□□□□ -0.34
CCDC30-204ENST00000462063 APLP2Q06481 763 aa12.93□□□□□ -0.34
CCDC30-204ENST00000462063 ZNF219Q9P2Y4 722 aaPredicted RBP12.9□□□□□ -0.34
CCDC30-204ENST00000462063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.86□□□□□ -0.35
CCDC30-204ENST00000462063 HNRNPUL2Q1KMD3 747 aaKnown RBP12.86□□□□□ -0.35
CCDC30-204ENST00000462063 SAMD1Q6SPF0 538 aaPredicted RBP12.78□□□□□ -0.36
CCDC30-204ENST00000462063 MYCNP04198 464 aaPredicted RBP12.6□□□□□ -0.39
CCDC30-204ENST00000462063 RBM42Q9BTD8 480 aaKnown RBP12.57□□□□□ -0.4
CCDC30-204ENST00000462063 POLA2Q14181 598 aa12.56□□□□□ -0.4
CCDC30-204ENST00000462063 SP7Q8TDD2 431 aaPredicted RBP12.54□□□□□ -0.4
CCDC30-204ENST00000462063 SLC4A1APQ9BWU0 796 aaKnown RBP12.4□□□□□ -0.42
CCDC30-204ENST00000462063 CHRDL2Q6WN34 429 aa12.39□□□□□ -0.43
CCDC30-204ENST00000462063 FOXD4L1Q9NU39 408 aa12.34□□□□□ -0.43
CCDC30-204ENST00000462063 ATF5Q9Y2D1 282 aaPredicted RBP12.34□□□□□ -0.43
CCDC30-204ENST00000462063 ZBTB12Q9Y330 459 aaPredicted RBP12.24□□□□□ -0.45
CCDC30-204ENST00000462063 AKT1S1Q96B36 256 aa12.22□□□□□ -0.45
CCDC30-204ENST00000462063 OSCARQ8IYS5 282 aa12.16□□□□□ -0.46
CCDC30-204ENST00000462063 REM2Q8IYK8 340 aaPredicted RBP12.13□□□□□ -0.47
CCDC30-204ENST00000462063 ZBTB22O15209 634 aa12.08□□□□□ -0.48
CCDC30-204ENST00000462063 PIP4P2Q8N4L2 257 aa12.05□□□□□ -0.48
CCDC30-204ENST00000462063 PITPNM1O00562 1244 aa12□□□□□ -0.49
CCDC30-204ENST00000462063 PLSCR2Q9NRY7 297 aa11.99□□□□□ -0.49
CCDC30-204ENST00000462063 HAX1O00165 279 aa11.95□□□□□ -0.5
CCDC30-204ENST00000462063 ATXN8OSP0DMR3 200 aa11.95□□□□□ -0.5
CCDC30-204ENST00000462063 FXR2P51116 673 aaKnown RBP eCLIP11.91□□□□□ -0.5
CCDC30-204ENST00000462063 FBLN2P98095 1184 aa11.89□□□□□ -0.51
CCDC30-204ENST00000462063 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
CCDC30-204ENST00000462063 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
CCDC30-204ENST00000462063 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
CCDC30-204ENST00000462063 CLEC11AQ9Y240 323 aa11.78□□□□□ -0.52
CCDC30-204ENST00000462063 EVX2Q03828 476 aa11.74□□□□□ -0.53
CCDC30-204ENST00000462063 MKRN4PQ13434 485 aaPredicted RBP11.74□□□□□ -0.53
CCDC30-204ENST00000462063 PRKAR2AP13861 404 aaKnown RBP11.72□□□□□ -0.53
CCDC30-204ENST00000462063 LHX8Q68G74 356 aa11.72□□□□□ -0.53
CCDC30-204ENST00000462063 SPDYE1Q8NFV5 336 aaPredicted RBP11.72□□□□□ -0.53
CCDC30-204ENST00000462063 ZNF692Q9BU19 519 aaPredicted RBP11.72□□□□□ -0.53
CCDC30-204ENST00000462063 SSUH2Q9Y2M2 353 aa11.64□□□□□ -0.55
CCDC30-204ENST00000462063 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
CCDC30-204ENST00000462063 C19orf67A6NJJ6 358 aa11.54□□□□□ -0.56
CCDC30-204ENST00000462063 PABPN1Q86U42 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
CCDC30-204ENST00000462063 PRR29P0C7W0 189 aa11.52□□□□□ -0.57
CCDC30-204ENST00000462063 GABBR2O75899 941 aa11.46□□□□□ -0.57
CCDC30-204ENST00000462063 CD44P16070 742 aaKnown RBP11.33□□□□□ -0.6
CCDC30-204ENST00000462063 CSRNP3Q8WYN3 585 aa11.33□□□□□ -0.6
CCDC30-204ENST00000462063 FARP1Q9Y4F1 1045 aaPredicted RBP11.32□□□□□ -0.6
CCDC30-204ENST00000462063 POTEIP0CG38 1075 aa11.2□□□□□ -0.62
CCDC30-204ENST00000462063 EHMT2Q96KQ7 1210 aa11.15□□□□□ -0.62
CCDC30-204ENST00000462063 DCBLD2Q96PD2 775 aa11.15□□□□□ -0.62
CCDC30-204ENST00000462063 ZRANB1Q9UGI0 708 aa11.15□□□□□ -0.62
CCDC30-204ENST00000462063 STAG3Q9UJ98 1225 aa11.15□□□□□ -0.62
CCDC30-204ENST00000462063 CLCN6P51797 869 aa11.14□□□□□ -0.63
CCDC30-204ENST00000462063 CREBZFQ9NS37 354 aa11.14□□□□□ -0.63
CCDC30-204ENST00000462063 POTEMA6NI47 508 aa11.13□□□□□ -0.63
CCDC30-204ENST00000462063 SPDYE4A6NLX3 237 aa11.11□□□□□ -0.63
CCDC30-204ENST00000462063 ZNF579Q8NAF0 562 aaKnown RBP11.09□□□□□ -0.63
CCDC30-204ENST00000462063 POTEGQ6S5H5 508 aa11.05□□□□□ -0.64
CCDC30-204ENST00000462063 GALR2O43603 387 aaPredicted RBP11.01□□□□□ -0.65
CCDC30-204ENST00000462063 PAK3O75914 559 aaPredicted RBP11.01□□□□□ -0.65
CCDC30-204ENST00000462063 PHF12Q96QT6 1004 aa10.97□□□□□ -0.65
CCDC30-204ENST00000462063 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.65
CCDC30-204ENST00000462063 OTUD5Q96G74 571 aa10.92□□□□□ -0.66
CCDC30-204ENST00000462063 PCDH10Q9P2E7 1040 aa10.9□□□□□ -0.66
CCDC30-204ENST00000462063 MNX1P50219 401 aaPredicted RBP10.88□□□□□ -0.67
CCDC30-204ENST00000462063 POTEB2H3BUK9 544 aa10.84□□□□□ -0.67
CCDC30-204ENST00000462063 PELP1Q8IZL8 1130 aaKnown RBP10.81□□□□□ -0.68
CCDC30-204ENST00000462063 MS4A3Q96HJ5 214 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms