RNA–Protein interactions for RNA: ENST00000462038.1

ITM2A-204, Transcript of integral membrane protein 2A, humanhuman

TSL 5

Gene ITM2A, Length 190 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-204ENST00000462038 CHIC1Q5VXU3 224 aa19.25■□□□□ 0.67
ITM2A-204ENST00000462038 AEBP2Q6ZN18 517 aaPredicted RBP19.04■□□□□ 0.64
ITM2A-204ENST00000462038 PHF23Q9BUL5 403 aaPredicted RBP16.96■□□□□ 0.31
ITM2A-204ENST00000462038 SENP3Q9H4L4 574 aaPredicted RBP16.13■□□□□ 0.17
ITM2A-204ENST00000462038 PLPPR3Q6T4P5 718 aa15.93■□□□□ 0.14
ITM2A-204ENST00000462038 FOXD1Q16676 465 aa14.84□□□□□ -0.03
ITM2A-204ENST00000462038 ADRA2BP18089 450 aa14.81□□□□□ -0.04
ITM2A-204ENST00000462038 PPP6R1Q9UPN7 881 aa14.75□□□□□ -0.05
ITM2A-204ENST00000462038 KCNA4P22459 653 aa14.41□□□□□ -0.1
ITM2A-204ENST00000462038 PIAS4Q8N2W9 510 aaPredicted RBP14.14□□□□□ -0.15
ITM2A-204ENST00000462038 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
ITM2A-204ENST00000462038 PPP4R3CPQ6ZMV5 832 aa14.08□□□□□ -0.16
ITM2A-204ENST00000462038 NCBP3Q53F19 620 aaKnown RBP13.93□□□□□ -0.18
ITM2A-204ENST00000462038 SLC4A1APQ9BWU0 796 aaKnown RBP13.86□□□□□ -0.19
ITM2A-204ENST00000462038 CSRNP3Q8WYN3 585 aa13.72□□□□□ -0.21
ITM2A-204ENST00000462038 NPM3O75607 178 aaKnown RBP13.68□□□□□ -0.22
ITM2A-204ENST00000462038 SCAF1Q9H7N4 1312 aaKnown RBP13.61□□□□□ -0.23
ITM2A-204ENST00000462038 CNKSR2Q8WXI2 1034 aa13.59□□□□□ -0.23
ITM2A-204ENST00000462038 MSH5O43196 834 aa13.5□□□□□ -0.25
ITM2A-204ENST00000462038 DNAJC5BQ9UF47 199 aa13.32□□□□□ -0.28
ITM2A-204ENST00000462038 ZBTB22O15209 634 aa13.25□□□□□ -0.29
ITM2A-204ENST00000462038 MAPK8IP2Q13387 824 aaPredicted RBP13.21□□□□□ -0.29
ITM2A-204ENST00000462038 RNF216Q9NWF9 866 aaPredicted RBP13.17□□□□□ -0.3
ITM2A-204ENST00000462038 FOXD4L1Q9NU39 408 aa13.13□□□□□ -0.31
ITM2A-204ENST00000462038 DMRT2Q9Y5R5 561 aa12.97□□□□□ -0.33
ITM2A-204ENST00000462038 HOXD11P31277 338 aaPredicted RBP12.96□□□□□ -0.33
ITM2A-204ENST00000462038 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
ITM2A-204ENST00000462038 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
ITM2A-204ENST00000462038 MYCNP04198 464 aaPredicted RBP12.65□□□□□ -0.38
ITM2A-204ENST00000462038 AMER1Q5JTC6 1135 aaPredicted RBP12.38□□□□□ -0.43
ITM2A-204ENST00000462038 FKBP8Q14318 412 aa12.34□□□□□ -0.43
ITM2A-204ENST00000462038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.3□□□□□ -0.44
ITM2A-204ENST00000462038 HNRNPUL2Q1KMD3 747 aaKnown RBP12.3□□□□□ -0.44
ITM2A-204ENST00000462038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.3□□□□□ -0.44
ITM2A-204ENST00000462038 RTN4Q9NQC3 1192 aaKnown RBP12.3□□□□□ -0.44
ITM2A-204ENST00000462038 DCAF8L1A6NGE4 600 aa12.29□□□□□ -0.44
ITM2A-204ENST00000462038 SAMD1Q6SPF0 538 aaPredicted RBP12.26□□□□□ -0.45
ITM2A-204ENST00000462038 ATF5Q9Y2D1 282 aaPredicted RBP12.2□□□□□ -0.46
ITM2A-204ENST00000462038 U3KPZ7 1027 aaPredicted RBP12.17□□□□□ -0.46
ITM2A-204ENST00000462038 SLC24A1O60721 1099 aa12.13□□□□□ -0.47
ITM2A-204ENST00000462038 APLP2Q06481 763 aa12.04□□□□□ -0.48
ITM2A-204ENST00000462038 ZNF219Q9P2Y4 722 aaPredicted RBP11.99□□□□□ -0.49
ITM2A-204ENST00000462038 FBXO3Q9UK99 471 aa11.82□□□□□ -0.52
ITM2A-204ENST00000462038 SPDYE4A6NLX3 237 aa11.78□□□□□ -0.52
ITM2A-204ENST00000462038 MKRN4PQ13434 485 aaPredicted RBP11.72□□□□□ -0.53
ITM2A-204ENST00000462038 PROM2Q8N271 834 aa11.72□□□□□ -0.53
ITM2A-204ENST00000462038 FBLN2P98095 1184 aa11.71□□□□□ -0.53
ITM2A-204ENST00000462038 TRHP20396 242 aaPredicted RBP11.64□□□□□ -0.55
ITM2A-204ENST00000462038 POLA2Q14181 598 aa11.62□□□□□ -0.55
ITM2A-204ENST00000462038 RNF39Q9H2S5 420 aa11.61□□□□□ -0.55
ITM2A-204ENST00000462038 SPINK5Q9NQ38 1064 aaPredicted RBP11.61□□□□□ -0.55
ITM2A-204ENST00000462038 VASPP50552 380 aaPredicted RBP11.58□□□□□ -0.56
ITM2A-204ENST00000462038 CAPN15O75808 1086 aa11.55□□□□□ -0.56
ITM2A-204ENST00000462038 C1QBPQ07021 282 aaKnown RBP11.54□□□□□ -0.56
ITM2A-204ENST00000462038 ZBTB12Q9Y330 459 aaPredicted RBP11.53□□□□□ -0.56
ITM2A-204ENST00000462038 IFNLR1Q8IU57 520 aaPredicted RBP11.47□□□□□ -0.57
ITM2A-204ENST00000462038 PLCB2Q00722 1185 aa11.4□□□□□ -0.58
ITM2A-204ENST00000462038 ABCB7O75027 752 aa11.35□□□□□ -0.59
ITM2A-204ENST00000462038 PKD2Q13563 968 aa11.33□□□□□ -0.6
ITM2A-204ENST00000462038 STAG3Q9UJ98 1225 aa11.3□□□□□ -0.6
ITM2A-204ENST00000462038 ZNF692Q9BU19 519 aaPredicted RBP11.29□□□□□ -0.6
ITM2A-204ENST00000462038 SPDYE2BA6NHP3 402 aa11.26□□□□□ -0.61
ITM2A-204ENST00000462038 SPDYE6P0CI01 402 aa11.26□□□□□ -0.61
ITM2A-204ENST00000462038 SPDYE2Q495Y8 402 aa11.26□□□□□ -0.61
ITM2A-204ENST00000462038 SPOCK2Q92563 424 aa11.26□□□□□ -0.61
ITM2A-204ENST00000462038 DCAF8L2P0C7V8 631 aa11.25□□□□□ -0.61
ITM2A-204ENST00000462038 DSG3P32926 999 aa11.25□□□□□ -0.61
ITM2A-204ENST00000462038 KLHL34Q8N239 644 aa11.24□□□□□ -0.61
ITM2A-204ENST00000462038 SSUH2Q9Y2M2 353 aa11.22□□□□□ -0.61
ITM2A-204ENST00000462038 HAP1P54257 671 aaPredicted RBP11.18□□□□□ -0.62
ITM2A-204ENST00000462038 POTEDQ86YR6 584 aa11.16□□□□□ -0.62
ITM2A-204ENST00000462038 OSCARQ8IYS5 282 aa11.16□□□□□ -0.62
ITM2A-204ENST00000462038 PLCD3Q8N3E9 789 aa11.15□□□□□ -0.62
ITM2A-204ENST00000462038 ECM2O94769 699 aaPredicted RBP11.13□□□□□ -0.63
ITM2A-204ENST00000462038 PABPN1Q86U42 306 aaKnown RBP eCLIP11.13□□□□□ -0.63
ITM2A-204ENST00000462038 VSIG10Q8N0Z9 540 aa11.12□□□□□ -0.63
ITM2A-204ENST00000462038 BBXQ8WY36 941 aaPredicted RBP11.12□□□□□ -0.63
ITM2A-204ENST00000462038 MIER1Q8N108 512 aa11.1□□□□□ -0.63
ITM2A-204ENST00000462038 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.1□□□□□ -0.63
ITM2A-204ENST00000462038 ZBTB47Q9UFB7 747 aaPredicted RBP11.05□□□□□ -0.64
ITM2A-204ENST00000462038 PLEKHG5O94827 1062 aa11.04□□□□□ -0.64
ITM2A-204ENST00000462038 BCANQ96GW7 911 aa11.03□□□□□ -0.64
ITM2A-204ENST00000462038 NPM1P06748 294 aaKnown RBP eCLIP11.01□□□□□ -0.65
ITM2A-204ENST00000462038 RGL2O15211 777 aa10.99□□□□□ -0.65
ITM2A-204ENST00000462038 PAXIP1Q6ZW49 1069 aaPredicted RBP10.96□□□□□ -0.65
ITM2A-204ENST00000462038 TRIM41Q8WV44 630 aa10.96□□□□□ -0.65
ITM2A-204ENST00000462038 SPRYD3Q8NCJ5 442 aa10.93□□□□□ -0.66
ITM2A-204ENST00000462038 CIZ1Q9ULV3 898 aaPredicted RBP10.93□□□□□ -0.66
ITM2A-204ENST00000462038 CFAP44Q96MT7 982 aa10.92□□□□□ -0.66
ITM2A-204ENST00000462038 KDM2AQ9Y2K7 1162 aa10.89□□□□□ -0.67
ITM2A-204ENST00000462038 CHGAP10645 457 aaKnown RBP10.86□□□□□ -0.67
ITM2A-204ENST00000462038 GSE1Q14687 1217 aa10.84□□□□□ -0.67
ITM2A-204ENST00000462038 CACNB1Q02641 598 aaPredicted RBP10.83□□□□□ -0.68
ITM2A-204ENST00000462038 TAOK2Q9UL54 1235 aa10.82□□□□□ -0.68
ITM2A-204ENST00000462038 HS6ST3Q8IZP7 471 aa10.8□□□□□ -0.68
ITM2A-204ENST00000462038 DNAJC5Q9H3Z4 198 aa10.79□□□□□ -0.68
ITM2A-204ENST00000462038 TSHZ2Q9NRE2 1034 aa10.78□□□□□ -0.68
ITM2A-204ENST00000462038 SPDYE1Q8NFV5 336 aaPredicted RBP10.77□□□□□ -0.69
ITM2A-204ENST00000462038 NUBP1P53384 320 aa10.76□□□□□ -0.69
ITM2A-204ENST00000462038 AKT1S1Q96B36 256 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 314.1 ms