RNA–Protein interactions for RNA: ENST00000461904.1

GTF2F2-202, Transcript of general transcription factor IIF subunit 2, humanhuman

TSL 5

Gene GTF2F2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-202ENST00000461904 AEBP2Q6ZN18 517 aaPredicted RBP24.05■■□□□ 1.44
GTF2F2-202ENST00000461904 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
GTF2F2-202ENST00000461904 SENP3Q9H4L4 574 aaPredicted RBP20.5■□□□□ 0.87
GTF2F2-202ENST00000461904 POTEDQ86YR6 584 aa20.3■□□□□ 0.84
GTF2F2-202ENST00000461904 PHF23Q9BUL5 403 aaPredicted RBP20.24■□□□□ 0.83
GTF2F2-202ENST00000461904 FOXD1Q16676 465 aa19.29■□□□□ 0.68
GTF2F2-202ENST00000461904 MSH5O43196 834 aa18.52■□□□□ 0.56
GTF2F2-202ENST00000461904 PLPPR3Q6T4P5 718 aa18.27■□□□□ 0.52
GTF2F2-202ENST00000461904 PIAS4Q8N2W9 510 aaPredicted RBP17.9■□□□□ 0.46
GTF2F2-202ENST00000461904 PPP6R1Q9UPN7 881 aa17.79■□□□□ 0.44
GTF2F2-202ENST00000461904 ADRA2BP18089 450 aa17.75■□□□□ 0.43
GTF2F2-202ENST00000461904 CACNB1Q02641 598 aaPredicted RBP16.75■□□□□ 0.27
GTF2F2-202ENST00000461904 MAPK8IP2Q13387 824 aaPredicted RBP16.39■□□□□ 0.21
GTF2F2-202ENST00000461904 SCAF1Q9H7N4 1312 aaKnown RBP16.29■□□□□ 0.2
GTF2F2-202ENST00000461904 DMRT2Q9Y5R5 561 aa16.22■□□□□ 0.19
GTF2F2-202ENST00000461904 PPP4R3CPQ6ZMV5 832 aa16.03■□□□□ 0.16
GTF2F2-202ENST00000461904 DCAF8L1A6NGE4 600 aa15.71■□□□□ 0.11
GTF2F2-202ENST00000461904 CNKSR2Q8WXI2 1034 aa15.7■□□□□ 0.1
GTF2F2-202ENST00000461904 RNF39Q9H2S5 420 aa15.68■□□□□ 0.1
GTF2F2-202ENST00000461904 POTEHQ6S545 545 aa15.66■□□□□ 0.1
GTF2F2-202ENST00000461904 HOXD11P31277 338 aaPredicted RBP15.53■□□□□ 0.08
GTF2F2-202ENST00000461904 NCBP3Q53F19 620 aaKnown RBP15.52■□□□□ 0.08
GTF2F2-202ENST00000461904 RNF216Q9NWF9 866 aaPredicted RBP15.5■□□□□ 0.07
GTF2F2-202ENST00000461904 C1QBPQ07021 282 aaKnown RBP15.37■□□□□ 0.05
GTF2F2-202ENST00000461904 NPM3O75607 178 aaKnown RBP15.23■□□□□ 0.03
GTF2F2-202ENST00000461904 KCNA4P22459 653 aa15.09■□□□□ 0.01
GTF2F2-202ENST00000461904 DNAJC5BQ9UF47 199 aa14.96□□□□□ -0.01
GTF2F2-202ENST00000461904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.9□□□□□ -0.02
GTF2F2-202ENST00000461904 U3KPZ7 1027 aaPredicted RBP14.51□□□□□ -0.09
GTF2F2-202ENST00000461904 SLC4A2P04920 1241 aa14.47□□□□□ -0.09
GTF2F2-202ENST00000461904 SPINK5Q9NQ38 1064 aaPredicted RBP14.41□□□□□ -0.1
GTF2F2-202ENST00000461904 CAPN15O75808 1086 aa14.4□□□□□ -0.1
GTF2F2-202ENST00000461904 SLC4A1APQ9BWU0 796 aaKnown RBP14.32□□□□□ -0.12
GTF2F2-202ENST00000461904 DSG3P32926 999 aa14.31□□□□□ -0.12
GTF2F2-202ENST00000461904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.24□□□□□ -0.13
GTF2F2-202ENST00000461904 HNRNPUL2Q1KMD3 747 aaKnown RBP14.24□□□□□ -0.13
GTF2F2-202ENST00000461904 APLP2Q06481 763 aa14.23□□□□□ -0.13
GTF2F2-202ENST00000461904 SAMD1Q6SPF0 538 aaPredicted RBP14.15□□□□□ -0.14
GTF2F2-202ENST00000461904 TRHP20396 242 aaPredicted RBP14.14□□□□□ -0.15
GTF2F2-202ENST00000461904 MYCNP04198 464 aaPredicted RBP14.1□□□□□ -0.15
GTF2F2-202ENST00000461904 ABCB7O75027 752 aa14.08□□□□□ -0.16
GTF2F2-202ENST00000461904 ZNF219Q9P2Y4 722 aaPredicted RBP14.07□□□□□ -0.16
GTF2F2-202ENST00000461904 SP7Q8TDD2 431 aaPredicted RBP14.06□□□□□ -0.16
GTF2F2-202ENST00000461904 FOXD4L1Q9NU39 408 aa14.04□□□□□ -0.16
GTF2F2-202ENST00000461904 CHRDL2Q6WN34 429 aa13.88□□□□□ -0.19
GTF2F2-202ENST00000461904 ZBTB22O15209 634 aa13.82□□□□□ -0.2
GTF2F2-202ENST00000461904 POLA2Q14181 598 aa13.77□□□□□ -0.21
GTF2F2-202ENST00000461904 ATF5Q9Y2D1 282 aaPredicted RBP13.72□□□□□ -0.21
GTF2F2-202ENST00000461904 RBM42Q9BTD8 480 aaKnown RBP13.64□□□□□ -0.23
GTF2F2-202ENST00000461904 ATXN8OSP0DMR3 200 aa13.59□□□□□ -0.23
GTF2F2-202ENST00000461904 PLSCR2Q9NRY7 297 aa13.53□□□□□ -0.24
GTF2F2-202ENST00000461904 ZBTB12Q9Y330 459 aaPredicted RBP13.5□□□□□ -0.25
GTF2F2-202ENST00000461904 HAX1O00165 279 aa13.43□□□□□ -0.26
GTF2F2-202ENST00000461904 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
GTF2F2-202ENST00000461904 EHMT2Q96KQ7 1210 aa13.37□□□□□ -0.27
GTF2F2-202ENST00000461904 FBLN2P98095 1184 aa13.27□□□□□ -0.29
GTF2F2-202ENST00000461904 OSCARQ8IYS5 282 aa13.27□□□□□ -0.29
GTF2F2-202ENST00000461904 AKT1S1Q96B36 256 aa13.27□□□□□ -0.29
GTF2F2-202ENST00000461904 PIP4P2Q8N4L2 257 aa13.26□□□□□ -0.29
GTF2F2-202ENST00000461904 LHX8Q68G74 356 aa13.2□□□□□ -0.3
GTF2F2-202ENST00000461904 REM2Q8IYK8 340 aaPredicted RBP13.19□□□□□ -0.3
GTF2F2-202ENST00000461904 EVX2Q03828 476 aa13.15□□□□□ -0.3
GTF2F2-202ENST00000461904 MKRN4PQ13434 485 aaPredicted RBP13.09□□□□□ -0.31
GTF2F2-202ENST00000461904 SPDYE2BA6NHP3 402 aa13.07□□□□□ -0.32
GTF2F2-202ENST00000461904 SPDYE6P0CI01 402 aa13.07□□□□□ -0.32
GTF2F2-202ENST00000461904 SPDYE2Q495Y8 402 aa13.07□□□□□ -0.32
GTF2F2-202ENST00000461904 PITPNM1O00562 1244 aa13.06□□□□□ -0.32
GTF2F2-202ENST00000461904 ZNF692Q9BU19 519 aaPredicted RBP12.99□□□□□ -0.33
GTF2F2-202ENST00000461904 FXR2P51116 673 aaKnown RBP eCLIP12.95□□□□□ -0.34
GTF2F2-202ENST00000461904 SSUH2Q9Y2M2 353 aa12.87□□□□□ -0.35
GTF2F2-202ENST00000461904 CLEC11AQ9Y240 323 aa12.84□□□□□ -0.35
GTF2F2-202ENST00000461904 SPDYE1Q8NFV5 336 aaPredicted RBP12.83□□□□□ -0.36
GTF2F2-202ENST00000461904 PABPN1Q86U42 306 aaKnown RBP eCLIP12.78□□□□□ -0.36
GTF2F2-202ENST00000461904 GABBR2O75899 941 aa12.76□□□□□ -0.37
GTF2F2-202ENST00000461904 PRKAR2AP13861 404 aaKnown RBP12.74□□□□□ -0.37
GTF2F2-202ENST00000461904 PRR29P0C7W0 189 aa12.64□□□□□ -0.39
GTF2F2-202ENST00000461904 SPDYE4A6NLX3 237 aa12.63□□□□□ -0.39
GTF2F2-202ENST00000461904 C19orf67A6NJJ6 358 aa12.59□□□□□ -0.39
GTF2F2-202ENST00000461904 CHADLQ6NUI6 762 aa12.59□□□□□ -0.39
GTF2F2-202ENST00000461904 POTEMA6NI47 508 aa12.51□□□□□ -0.41
GTF2F2-202ENST00000461904 STAG3Q9UJ98 1225 aa12.49□□□□□ -0.41
GTF2F2-202ENST00000461904 POTEIP0CG38 1075 aa12.47□□□□□ -0.41
GTF2F2-202ENST00000461904 POTEGQ6S5H5 508 aa12.42□□□□□ -0.42
GTF2F2-202ENST00000461904 FARP1Q9Y4F1 1045 aaPredicted RBP12.36□□□□□ -0.43
GTF2F2-202ENST00000461904 CD44P16070 742 aaKnown RBP12.31□□□□□ -0.44
GTF2F2-202ENST00000461904 PCDH10Q9P2E7 1040 aa12.3□□□□□ -0.44
GTF2F2-202ENST00000461904 CREBZFQ9NS37 354 aa12.29□□□□□ -0.44
GTF2F2-202ENST00000461904 PROM2Q8N271 834 aa12.25□□□□□ -0.45
GTF2F2-202ENST00000461904 OTUD5Q96G74 571 aa12.25□□□□□ -0.45
GTF2F2-202ENST00000461904 FKBP8Q14318 412 aa12.19□□□□□ -0.46
GTF2F2-202ENST00000461904 DCBLD2Q96PD2 775 aa12.17□□□□□ -0.46
GTF2F2-202ENST00000461904 NPM1P06748 294 aaKnown RBP eCLIP12.15□□□□□ -0.46
GTF2F2-202ENST00000461904 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
GTF2F2-202ENST00000461904 PAK3O75914 559 aaPredicted RBP12.09□□□□□ -0.47
GTF2F2-202ENST00000461904 PLEKHG5O94827 1062 aa12.09□□□□□ -0.47
GTF2F2-202ENST00000461904 MIER1Q8N108 512 aa12.09□□□□□ -0.47
GTF2F2-202ENST00000461904 MNX1P50219 401 aaPredicted RBP12.07□□□□□ -0.48
GTF2F2-202ENST00000461904 CLCN6P51797 869 aa12.06□□□□□ -0.48
GTF2F2-202ENST00000461904 POTEB2H3BUK9 544 aa12.05□□□□□ -0.48
GTF2F2-202ENST00000461904 ZNF579Q8NAF0 562 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms