RNA–Protein interactions for RNA: ENST00000461810.1

PSME4-203, Transcript of proteasome activator subunit 4, humanhuman

TSL 3

Gene PSME4, Length 562 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-203ENST00000461810 AEBP2Q6ZN18 517 aaPredicted RBP25.7■■□□□ 1.7
PSME4-203ENST00000461810 CHIC1Q5VXU3 224 aa24.22■■□□□ 1.47
PSME4-203ENST00000461810 SENP3Q9H4L4 574 aaPredicted RBP21.96■■□□□ 1.11
PSME4-203ENST00000461810 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
PSME4-203ENST00000461810 FOXD1Q16676 465 aa20.5■□□□□ 0.87
PSME4-203ENST00000461810 MSH5O43196 834 aa19.26■□□□□ 0.67
PSME4-203ENST00000461810 PLPPR3Q6T4P5 718 aa19.26■□□□□ 0.67
PSME4-203ENST00000461810 POTEDQ86YR6 584 aa19.15■□□□□ 0.66
PSME4-203ENST00000461810 PIAS4Q8N2W9 510 aaPredicted RBP19.1■□□□□ 0.65
PSME4-203ENST00000461810 PPP6R1Q9UPN7 881 aa19.03■□□□□ 0.64
PSME4-203ENST00000461810 ADRA2BP18089 450 aa18.96■□□□□ 0.63
PSME4-203ENST00000461810 MAPK8IP2Q13387 824 aaPredicted RBP17.49■□□□□ 0.39
PSME4-203ENST00000461810 DMRT2Q9Y5R5 561 aa17.38■□□□□ 0.37
PSME4-203ENST00000461810 SCAF1Q9H7N4 1312 aaKnown RBP17.35■□□□□ 0.37
PSME4-203ENST00000461810 PPP4R3CPQ6ZMV5 832 aa16.87■□□□□ 0.29
PSME4-203ENST00000461810 DCAF8L1A6NGE4 600 aa16.72■□□□□ 0.27
PSME4-203ENST00000461810 CACNB1Q02641 598 aaPredicted RBP16.68■□□□□ 0.26
PSME4-203ENST00000461810 HOXD11P31277 338 aaPredicted RBP16.66■□□□□ 0.26
PSME4-203ENST00000461810 CNKSR2Q8WXI2 1034 aa16.59■□□□□ 0.25
PSME4-203ENST00000461810 RNF216Q9NWF9 866 aaPredicted RBP16.48■□□□□ 0.23
PSME4-203ENST00000461810 RNF39Q9H2S5 420 aa16.41■□□□□ 0.22
PSME4-203ENST00000461810 C1QBPQ07021 282 aaKnown RBP16.17■□□□□ 0.18
PSME4-203ENST00000461810 NCBP3Q53F19 620 aaKnown RBP16.17■□□□□ 0.18
PSME4-203ENST00000461810 DNAJC5BQ9UF47 199 aa16.12■□□□□ 0.17
PSME4-203ENST00000461810 NPM3O75607 178 aaKnown RBP15.91■□□□□ 0.14
PSME4-203ENST00000461810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.91■□□□□ 0.14
PSME4-203ENST00000461810 U3KPZ7 1027 aaPredicted RBP15.52■□□□□ 0.08
PSME4-203ENST00000461810 KCNA4P22459 653 aa15.43■□□□□ 0.06
PSME4-203ENST00000461810 CAPN15O75808 1086 aa15.37■□□□□ 0.05
PSME4-203ENST00000461810 SPINK5Q9NQ38 1064 aaPredicted RBP15.37■□□□□ 0.05
PSME4-203ENST00000461810 DSG3P32926 999 aa15.31■□□□□ 0.04
PSME4-203ENST00000461810 SLC4A2P04920 1241 aa15.25■□□□□ 0.03
PSME4-203ENST00000461810 TRHP20396 242 aaPredicted RBP15.08■□□□□ 0
PSME4-203ENST00000461810 APLP2Q06481 763 aa15.07■□□□□ 0
PSME4-203ENST00000461810 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.02■□□□□ -0
PSME4-203ENST00000461810 HNRNPUL2Q1KMD3 747 aaKnown RBP15.02■□□□□ -0
PSME4-203ENST00000461810 ZNF219Q9P2Y4 722 aaPredicted RBP15.01□□□□□ -0.01
PSME4-203ENST00000461810 ABCB7O75027 752 aa14.99□□□□□ -0.01
PSME4-203ENST00000461810 POTEHQ6S545 545 aa14.97□□□□□ -0.01
PSME4-203ENST00000461810 SAMD1Q6SPF0 538 aaPredicted RBP14.92□□□□□ -0.02
PSME4-203ENST00000461810 MYCNP04198 464 aaPredicted RBP14.72□□□□□ -0.05
PSME4-203ENST00000461810 POLA2Q14181 598 aa14.63□□□□□ -0.07
PSME4-203ENST00000461810 RBM42Q9BTD8 480 aaKnown RBP14.61□□□□□ -0.07
PSME4-203ENST00000461810 SLC4A1APQ9BWU0 796 aaKnown RBP14.53□□□□□ -0.08
PSME4-203ENST00000461810 FOXD4L1Q9NU39 408 aa14.46□□□□□ -0.09
PSME4-203ENST00000461810 ATF5Q9Y2D1 282 aaPredicted RBP14.41□□□□□ -0.1
PSME4-203ENST00000461810 CHRDL2Q6WN34 429 aa14.37□□□□□ -0.11
PSME4-203ENST00000461810 ZBTB12Q9Y330 459 aaPredicted RBP14.28□□□□□ -0.12
PSME4-203ENST00000461810 AKT1S1Q96B36 256 aa14.24□□□□□ -0.13
PSME4-203ENST00000461810 ZBTB22O15209 634 aa14.17□□□□□ -0.14
PSME4-203ENST00000461810 OSCARQ8IYS5 282 aa14.13□□□□□ -0.15
PSME4-203ENST00000461810 REM2Q8IYK8 340 aaPredicted RBP14.11□□□□□ -0.15
PSME4-203ENST00000461810 ATXN8OSP0DMR3 200 aa14.04□□□□□ -0.16
PSME4-203ENST00000461810 PIP4P2Q8N4L2 257 aa13.99□□□□□ -0.17
PSME4-203ENST00000461810 PITPNM1O00562 1244 aa13.94□□□□□ -0.18
PSME4-203ENST00000461810 SP7Q8TDD2 431 aaPredicted RBP13.93□□□□□ -0.18
PSME4-203ENST00000461810 FXR2P51116 673 aaKnown RBP eCLIP13.87□□□□□ -0.191e-8■■□□□ 14.2
PSME4-203ENST00000461810 FBLN2P98095 1184 aa13.87□□□□□ -0.19
PSME4-203ENST00000461810 SPDYE2BA6NHP3 402 aa13.84□□□□□ -0.19
PSME4-203ENST00000461810 SPDYE6P0CI01 402 aa13.84□□□□□ -0.19
PSME4-203ENST00000461810 SPDYE2Q495Y8 402 aa13.84□□□□□ -0.19
PSME4-203ENST00000461810 HAX1O00165 279 aa13.83□□□□□ -0.2
PSME4-203ENST00000461810 MKRN4PQ13434 485 aaPredicted RBP13.72□□□□□ -0.21
PSME4-203ENST00000461810 EHMT2Q96KQ7 1210 aa13.67□□□□□ -0.22
PSME4-203ENST00000461810 ZNF692Q9BU19 519 aaPredicted RBP13.66□□□□□ -0.22
PSME4-203ENST00000461810 CLEC11AQ9Y240 323 aa13.66□□□□□ -0.22
PSME4-203ENST00000461810 SPDYE1Q8NFV5 336 aaPredicted RBP13.65□□□□□ -0.22
PSME4-203ENST00000461810 EVX2Q03828 476 aa13.62□□□□□ -0.23
PSME4-203ENST00000461810 SSUH2Q9Y2M2 353 aa13.61□□□□□ -0.23
PSME4-203ENST00000461810 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
PSME4-203ENST00000461810 C19orf67A6NJJ6 358 aa13.44□□□□□ -0.26
PSME4-203ENST00000461810 PABPN1Q86U42 306 aaKnown RBP eCLIP13.44□□□□□ -0.26
PSME4-203ENST00000461810 PRR29P0C7W0 189 aa13.41□□□□□ -0.26
PSME4-203ENST00000461810 CHADLQ6NUI6 762 aa13.41□□□□□ -0.26
PSME4-203ENST00000461810 CSRNP3Q8WYN3 585 aa13.35□□□□□ -0.27
PSME4-203ENST00000461810 GABBR2O75899 941 aa13.31□□□□□ -0.28
PSME4-203ENST00000461810 FARP1Q9Y4F1 1045 aaPredicted RBP13.19□□□□□ -0.3
PSME4-203ENST00000461810 CD44P16070 742 aaKnown RBP13.15□□□□□ -0.3
PSME4-203ENST00000461810 LHX8Q68G74 356 aa13.09□□□□□ -0.31
PSME4-203ENST00000461810 STAG3Q9UJ98 1225 aa13.04□□□□□ -0.32
PSME4-203ENST00000461810 CLCN6P51797 869 aa13.02□□□□□ -0.33
PSME4-203ENST00000461810 POTEIP0CG38 1075 aa13.01□□□□□ -0.33
PSME4-203ENST00000461810 CREBZFQ9NS37 354 aa13□□□□□ -0.33
PSME4-203ENST00000461810 SPDYE4A6NLX3 237 aa12.99□□□□□ -0.33
PSME4-203ENST00000461810 ZRANB1Q9UGI0 708 aa12.95□□□□□ -0.34
PSME4-203ENST00000461810 ZNF579Q8NAF0 562 aaKnown RBP12.92□□□□□ -0.34
PSME4-203ENST00000461810 DCBLD2Q96PD2 775 aa12.92□□□□□ -0.34
PSME4-203ENST00000461810 GALR2O43603 387 aaPredicted RBP12.79□□□□□ -0.36
PSME4-203ENST00000461810 PAK3O75914 559 aaPredicted RBP12.79□□□□□ -0.36
PSME4-203ENST00000461810 NPM1P06748 294 aaKnown RBP eCLIP12.78□□□□□ -0.36
PSME4-203ENST00000461810 MNX1P50219 401 aaPredicted RBP12.74□□□□□ -0.37
PSME4-203ENST00000461810 PHF12Q96QT6 1004 aa12.73□□□□□ -0.37
PSME4-203ENST00000461810 PROM2Q8N271 834 aa12.6□□□□□ -0.39
PSME4-203ENST00000461810 POTEB2H3BUK9 544 aa12.58□□□□□ -0.4
PSME4-203ENST00000461810 PELP1Q8IZL8 1130 aaKnown RBP12.57□□□□□ -0.4
PSME4-203ENST00000461810 OTUD5Q96G74 571 aa12.57□□□□□ -0.4
PSME4-203ENST00000461810 MS4A3Q96HJ5 214 aa12.55□□□□□ -0.4
PSME4-203ENST00000461810 TSPYL2Q9H2G4 693 aaPredicted RBP12.55□□□□□ -0.4
PSME4-203ENST00000461810 ASTLQ6HA08 431 aaPredicted RBP12.5□□□□□ -0.41
PSME4-203ENST00000461810 ATMINO43313 823 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms