RNA–Protein interactions for RNA: ENST00000461526.1

LYST-203, Transcript of lysosomal trafficking regulator, humanhuman

TSL 3

Gene LYST, Length 866 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-203ENST00000461526 AEBP2Q6ZN18 517 aaPredicted RBP23.65■■□□□ 1.38
LYST-203ENST00000461526 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
LYST-203ENST00000461526 SENP3Q9H4L4 574 aaPredicted RBP20.33■□□□□ 0.85
LYST-203ENST00000461526 PHF23Q9BUL5 403 aaPredicted RBP20■□□□□ 0.79
LYST-203ENST00000461526 FOXD1Q16676 465 aa18.86■□□□□ 0.61
LYST-203ENST00000461526 PLPPR3Q6T4P5 718 aa18.07■□□□□ 0.48
LYST-203ENST00000461526 MSH5O43196 834 aa17.77■□□□□ 0.44
LYST-203ENST00000461526 PIAS4Q8N2W9 510 aaPredicted RBP17.68■□□□□ 0.42
LYST-203ENST00000461526 PPP6R1Q9UPN7 881 aa17.57■□□□□ 0.4
LYST-203ENST00000461526 ADRA2BP18089 450 aa17.54■□□□□ 0.4
LYST-203ENST00000461526 POTEDQ86YR6 584 aa17.37■□□□□ 0.37
LYST-203ENST00000461526 SCAF1Q9H7N4 1312 aaKnown RBP16.23■□□□□ 0.19
LYST-203ENST00000461526 MAPK8IP2Q13387 824 aaPredicted RBP16.09■□□□□ 0.17
LYST-203ENST00000461526 DMRT2Q9Y5R5 561 aa16.08■□□□□ 0.16
LYST-203ENST00000461526 PPP4R3CPQ6ZMV5 832 aa15.79■□□□□ 0.12
LYST-203ENST00000461526 CNKSR2Q8WXI2 1034 aa15.54■□□□□ 0.08
LYST-203ENST00000461526 HOXD11P31277 338 aaPredicted RBP15.48■□□□□ 0.07
LYST-203ENST00000461526 DCAF8L1A6NGE4 600 aa15.47■□□□□ 0.07
LYST-203ENST00000461526 RNF216Q9NWF9 866 aaPredicted RBP15.39■□□□□ 0.05
LYST-203ENST00000461526 NCBP3Q53F19 620 aaKnown RBP15.29■□□□□ 0.04
LYST-203ENST00000461526 CACNB1Q02641 598 aaPredicted RBP15.23■□□□□ 0.03
LYST-203ENST00000461526 RNF39Q9H2S5 420 aa15.09■□□□□ 0.01
LYST-203ENST00000461526 DNAJC5BQ9UF47 199 aa15.01□□□□□ -0.01
LYST-203ENST00000461526 NPM3O75607 178 aaKnown RBP14.94□□□□□ -0.02
LYST-203ENST00000461526 C1QBPQ07021 282 aaKnown RBP14.93□□□□□ -0.02
LYST-203ENST00000461526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.81□□□□□ -0.04
LYST-203ENST00000461526 KCNA4P22459 653 aa14.62□□□□□ -0.07
LYST-203ENST00000461526 U3KPZ7 1027 aaPredicted RBP14.41□□□□□ -0.1
LYST-203ENST00000461526 CAPN15O75808 1086 aa14.25□□□□□ -0.13
LYST-203ENST00000461526 SLC4A2P04920 1241 aa14.23□□□□□ -0.13
LYST-203ENST00000461526 APLP2Q06481 763 aa14.2□□□□□ -0.14
LYST-203ENST00000461526 SPINK5Q9NQ38 1064 aaPredicted RBP14.18□□□□□ -0.14
LYST-203ENST00000461526 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.16□□□□□ -0.14
LYST-203ENST00000461526 HNRNPUL2Q1KMD3 747 aaKnown RBP14.16□□□□□ -0.14
LYST-203ENST00000461526 DSG3P32926 999 aa14.11□□□□□ -0.15
LYST-203ENST00000461526 SAMD1Q6SPF0 538 aaPredicted RBP14.04□□□□□ -0.16
LYST-203ENST00000461526 ZNF219Q9P2Y4 722 aaPredicted RBP14.03□□□□□ -0.16
LYST-203ENST00000461526 TRHP20396 242 aaPredicted RBP14□□□□□ -0.17
LYST-203ENST00000461526 MYCNP04198 464 aaPredicted RBP13.89□□□□□ -0.19
LYST-203ENST00000461526 ABCB7O75027 752 aa13.87□□□□□ -0.19
LYST-203ENST00000461526 SLC4A1APQ9BWU0 796 aaKnown RBP13.87□□□□□ -0.19
LYST-203ENST00000461526 FOXD4L1Q9NU39 408 aa13.72□□□□□ -0.21
LYST-203ENST00000461526 POLA2Q14181 598 aa13.62□□□□□ -0.23
LYST-203ENST00000461526 RBM42Q9BTD8 480 aaKnown RBP13.59□□□□□ -0.23
LYST-203ENST00000461526 POTEHQ6S545 545 aa13.58□□□□□ -0.24
LYST-203ENST00000461526 ZBTB12Q9Y330 459 aaPredicted RBP13.45□□□□□ -0.26
LYST-203ENST00000461526 ATF5Q9Y2D1 282 aaPredicted RBP13.43□□□□□ -0.26
LYST-203ENST00000461526 ZBTB22O15209 634 aa13.38□□□□□ -0.27
LYST-203ENST00000461526 ATXN8OSP0DMR3 200 aa13.34□□□□□ -0.27
LYST-203ENST00000461526 CHRDL2Q6WN34 429 aa13.22□□□□□ -0.29
LYST-203ENST00000461526 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
LYST-203ENST00000461526 OSCARQ8IYS5 282 aa13.16□□□□□ -0.3
LYST-203ENST00000461526 EHMT2Q96KQ7 1210 aa13.11□□□□□ -0.31
LYST-203ENST00000461526 FBLN2P98095 1184 aa13.09□□□□□ -0.31
LYST-203ENST00000461526 REM2Q8IYK8 340 aaPredicted RBP13.05□□□□□ -0.32
LYST-203ENST00000461526 SPDYE2BA6NHP3 402 aa12.97□□□□□ -0.33
LYST-203ENST00000461526 SPDYE6P0CI01 402 aa12.97□□□□□ -0.33
LYST-203ENST00000461526 SPDYE2Q495Y8 402 aa12.97□□□□□ -0.33
LYST-203ENST00000461526 CSRNP3Q8WYN3 585 aa12.96□□□□□ -0.33
LYST-203ENST00000461526 PITPNM1O00562 1244 aa12.91□□□□□ -0.34
LYST-203ENST00000461526 PIP4P2Q8N4L2 257 aa12.87□□□□□ -0.35
LYST-203ENST00000461526 MKRN4PQ13434 485 aaPredicted RBP12.83□□□□□ -0.36
LYST-203ENST00000461526 ZNF692Q9BU19 519 aaPredicted RBP12.81□□□□□ -0.36
LYST-203ENST00000461526 FXR2P51116 673 aaKnown RBP eCLIP12.8□□□□□ -0.36
LYST-203ENST00000461526 SPDYE1Q8NFV5 336 aaPredicted RBP12.77□□□□□ -0.37
LYST-203ENST00000461526 SSUH2Q9Y2M2 353 aa12.74□□□□□ -0.37
LYST-203ENST00000461526 SP7Q8TDD2 431 aaPredicted RBP12.72□□□□□ -0.37
LYST-203ENST00000461526 CLEC11AQ9Y240 323 aa12.71□□□□□ -0.37
LYST-203ENST00000461526 HAX1O00165 279 aa12.69□□□□□ -0.38
LYST-203ENST00000461526 PRKAR2AP13861 404 aaKnown RBP12.6□□□□□ -0.39
LYST-203ENST00000461526 PABPN1Q86U42 306 aaKnown RBP eCLIP12.59□□□□□ -0.39
LYST-203ENST00000461526 PRR29P0C7W0 189 aa12.52□□□□□ -0.41
LYST-203ENST00000461526 EVX2Q03828 476 aa12.4□□□□□ -0.42
LYST-203ENST00000461526 CHADLQ6NUI6 762 aa12.4□□□□□ -0.42
LYST-203ENST00000461526 C19orf67A6NJJ6 358 aa12.39□□□□□ -0.43
LYST-203ENST00000461526 STAG3Q9UJ98 1225 aa12.33□□□□□ -0.44
LYST-203ENST00000461526 SPDYE4A6NLX3 237 aa12.32□□□□□ -0.44
LYST-203ENST00000461526 FARP1Q9Y4F1 1045 aaPredicted RBP12.27□□□□□ -0.45
LYST-203ENST00000461526 GABBR2O75899 941 aa12.21□□□□□ -0.45
LYST-203ENST00000461526 CD44P16070 742 aaKnown RBP12.21□□□□□ -0.45
LYST-203ENST00000461526 CLCN6P51797 869 aa12.15□□□□□ -0.46
LYST-203ENST00000461526 CREBZFQ9NS37 354 aa12.13□□□□□ -0.47
LYST-203ENST00000461526 ZRANB1Q9UGI0 708 aa12.04□□□□□ -0.48
LYST-203ENST00000461526 PAK3O75914 559 aaPredicted RBP12.03□□□□□ -0.48
LYST-203ENST00000461526 NPM1P06748 294 aaKnown RBP eCLIP12.03□□□□□ -0.48
LYST-203ENST00000461526 ZNF579Q8NAF0 562 aaKnown RBP12.01□□□□□ -0.49
LYST-203ENST00000461526 PROM2Q8N271 834 aa11.97□□□□□ -0.49
LYST-203ENST00000461526 DCBLD2Q96PD2 775 aa11.96□□□□□ -0.49
LYST-203ENST00000461526 LHX8Q68G74 356 aa11.93□□□□□ -0.5
LYST-203ENST00000461526 MNX1P50219 401 aaPredicted RBP11.89□□□□□ -0.51
LYST-203ENST00000461526 PLEKHG5O94827 1062 aa11.88□□□□□ -0.51
LYST-203ENST00000461526 POTEIP0CG38 1075 aa11.87□□□□□ -0.51
LYST-203ENST00000461526 GALR2O43603 387 aaPredicted RBP11.82□□□□□ -0.52
LYST-203ENST00000461526 PHF12Q96QT6 1004 aa11.81□□□□□ -0.52
LYST-203ENST00000461526 MIER1Q8N108 512 aa11.78□□□□□ -0.52
LYST-203ENST00000461526 FKBP8Q14318 412 aa11.75□□□□□ -0.53
LYST-203ENST00000461526 TSPYL2Q9H2G4 693 aaPredicted RBP11.73□□□□□ -0.53
LYST-203ENST00000461526 PLCD3Q8N3E9 789 aa11.71□□□□□ -0.53
LYST-203ENST00000461526 ZBTB47Q9UFB7 747 aaPredicted RBP11.68□□□□□ -0.54
LYST-203ENST00000461526 MS4A3Q96HJ5 214 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms