RNA–Protein interactions for RNA: ENST00000461143.1

PCLO-208, Transcript of piccolo presynaptic cytomatrix protein, humanhuman

TSL 2

Gene PCLO, Length 428 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCLO-208ENST00000461143 AEBP2Q6ZN18 517 aaPredicted RBP22.1■■□□□ 1.13
PCLO-208ENST00000461143 CHIC1Q5VXU3 224 aa21.27■■□□□ 1
PCLO-208ENST00000461143 SENP3Q9H4L4 574 aaPredicted RBP18.8■□□□□ 0.6
PCLO-208ENST00000461143 PHF23Q9BUL5 403 aaPredicted RBP18.67■□□□□ 0.58
PCLO-208ENST00000461143 FOXD1Q16676 465 aa17.48■□□□□ 0.39
PCLO-208ENST00000461143 PLPPR3Q6T4P5 718 aa17.11■□□□□ 0.33
PCLO-208ENST00000461143 PPP6R1Q9UPN7 881 aa16.57■□□□□ 0.24
PCLO-208ENST00000461143 ADRA2BP18089 450 aa16.49■□□□□ 0.23
PCLO-208ENST00000461143 PIAS4Q8N2W9 510 aaPredicted RBP16.35■□□□□ 0.21
PCLO-208ENST00000461143 MSH5O43196 834 aa16.25■□□□□ 0.19
PCLO-208ENST00000461143 POTEDQ86YR6 584 aa15.36■□□□□ 0.05
PCLO-208ENST00000461143 SCAF1Q9H7N4 1312 aaKnown RBP15.11■□□□□ 0.01
PCLO-208ENST00000461143 MAPK8IP2Q13387 824 aaPredicted RBP15.05■□□□□ -0
PCLO-208ENST00000461143 PPP4R3CPQ6ZMV5 832 aa15.01□□□□□ -0.01
PCLO-208ENST00000461143 DMRT2Q9Y5R5 561 aa14.98□□□□□ -0.01
PCLO-208ENST00000461143 CNKSR2Q8WXI2 1034 aa14.69□□□□□ -0.06
PCLO-208ENST00000461143 HOXD11P31277 338 aaPredicted RBP14.56□□□□□ -0.08
PCLO-208ENST00000461143 NCBP3Q53F19 620 aaKnown RBP14.52□□□□□ -0.09
PCLO-208ENST00000461143 RNF216Q9NWF9 866 aaPredicted RBP14.5□□□□□ -0.09
PCLO-208ENST00000461143 NPM3O75607 178 aaKnown RBP14.32□□□□□ -0.12
PCLO-208ENST00000461143 KCNA4P22459 653 aa14.28□□□□□ -0.12
PCLO-208ENST00000461143 DCAF8L1A6NGE4 600 aa14.18□□□□□ -0.14
PCLO-208ENST00000461143 DNAJC5BQ9UF47 199 aa14.13□□□□□ -0.15
PCLO-208ENST00000461143 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
PCLO-208ENST00000461143 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCLO-208ENST00000461143 C1QBPQ07021 282 aaKnown RBP13.73□□□□□ -0.21
PCLO-208ENST00000461143 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
PCLO-208ENST00000461143 SLC4A2P04920 1241 aa13.63□□□□□ -0.23
PCLO-208ENST00000461143 U3KPZ7 1027 aaPredicted RBP13.56□□□□□ -0.24
PCLO-208ENST00000461143 SLC4A1APQ9BWU0 796 aaKnown RBP13.53□□□□□ -0.24
PCLO-208ENST00000461143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.28□□□□□ -0.28
PCLO-208ENST00000461143 HNRNPUL2Q1KMD3 747 aaKnown RBP13.28□□□□□ -0.28
PCLO-208ENST00000461143 SPINK5Q9NQ38 1064 aaPredicted RBP13.25□□□□□ -0.29
PCLO-208ENST00000461143 FOXD4L1Q9NU39 408 aa13.25□□□□□ -0.29
PCLO-208ENST00000461143 MYCNP04198 464 aaPredicted RBP13.24□□□□□ -0.29
PCLO-208ENST00000461143 SAMD1Q6SPF0 538 aaPredicted RBP13.22□□□□□ -0.29
PCLO-208ENST00000461143 APLP2Q06481 763 aa13.2□□□□□ -0.3
PCLO-208ENST00000461143 ZBTB22O15209 634 aa13.17□□□□□ -0.3
PCLO-208ENST00000461143 CAPN15O75808 1086 aa13.16□□□□□ -0.3
PCLO-208ENST00000461143 DSG3P32926 999 aa13.11□□□□□ -0.31
PCLO-208ENST00000461143 ZNF219Q9P2Y4 722 aaPredicted RBP13.08□□□□□ -0.32
PCLO-208ENST00000461143 TRHP20396 242 aaPredicted RBP13.01□□□□□ -0.33
PCLO-208ENST00000461143 ATF5Q9Y2D1 282 aaPredicted RBP12.9□□□□□ -0.34
PCLO-208ENST00000461143 ATXN8OSP0DMR3 200 aa12.89□□□□□ -0.35
PCLO-208ENST00000461143 ABCB7O75027 752 aa12.87□□□□□ -0.35
PCLO-208ENST00000461143 CSRNP3Q8WYN3 585 aa12.81□□□□□ -0.36
PCLO-208ENST00000461143 POLA2Q14181 598 aa12.78□□□□□ -0.36
PCLO-208ENST00000461143 EHMT2Q96KQ7 1210 aa12.69□□□□□ -0.38
PCLO-208ENST00000461143 ZBTB12Q9Y330 459 aaPredicted RBP12.6□□□□□ -0.39
PCLO-208ENST00000461143 RBM42Q9BTD8 480 aaKnown RBP12.49□□□□□ -0.41
PCLO-208ENST00000461143 OSCARQ8IYS5 282 aa12.36□□□□□ -0.43
PCLO-208ENST00000461143 FBLN2P98095 1184 aa12.35□□□□□ -0.43
PCLO-208ENST00000461143 MKRN4PQ13434 485 aaPredicted RBP12.35□□□□□ -0.43
PCLO-208ENST00000461143 AKT1S1Q96B36 256 aa12.28□□□□□ -0.44
PCLO-208ENST00000461143 SPDYE2BA6NHP3 402 aa12.23□□□□□ -0.45
PCLO-208ENST00000461143 SPDYE6P0CI01 402 aa12.23□□□□□ -0.45
PCLO-208ENST00000461143 SPDYE2Q495Y8 402 aa12.23□□□□□ -0.45
PCLO-208ENST00000461143 REM2Q8IYK8 340 aaPredicted RBP12.15□□□□□ -0.46
PCLO-208ENST00000461143 SSUH2Q9Y2M2 353 aa12.13□□□□□ -0.47
PCLO-208ENST00000461143 CHRDL2Q6WN34 429 aa12.1□□□□□ -0.47
PCLO-208ENST00000461143 POTEHQ6S545 545 aa12.08□□□□□ -0.48
PCLO-208ENST00000461143 ZNF692Q9BU19 519 aaPredicted RBP12.07□□□□□ -0.48
PCLO-208ENST00000461143 PITPNM1O00562 1244 aa12□□□□□ -0.49
PCLO-208ENST00000461143 SPDYE1Q8NFV5 336 aaPredicted RBP11.92□□□□□ -0.5
PCLO-208ENST00000461143 PABPN1Q86U42 306 aaKnown RBP eCLIP11.91□□□□□ -0.5
PCLO-208ENST00000461143 FXR2P51116 673 aaKnown RBP eCLIP11.89□□□□□ -0.51
PCLO-208ENST00000461143 PIP4P2Q8N4L2 257 aa11.88□□□□□ -0.51
PCLO-208ENST00000461143 SPDYE4A6NLX3 237 aa11.87□□□□□ -0.51
PCLO-208ENST00000461143 CLEC11AQ9Y240 323 aa11.78□□□□□ -0.52
PCLO-208ENST00000461143 PROM2Q8N271 834 aa11.76□□□□□ -0.53
PCLO-208ENST00000461143 PRR29P0C7W0 189 aa11.69□□□□□ -0.54
PCLO-208ENST00000461143 STAG3Q9UJ98 1225 aa11.67□□□□□ -0.54
PCLO-208ENST00000461143 PRKAR2AP13861 404 aaKnown RBP11.66□□□□□ -0.54
PCLO-208ENST00000461143 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
PCLO-208ENST00000461143 FKBP8Q14318 412 aa11.53□□□□□ -0.56
PCLO-208ENST00000461143 CREBZFQ9NS37 354 aa11.52□□□□□ -0.57
PCLO-208ENST00000461143 HAX1O00165 279 aa11.51□□□□□ -0.57
PCLO-208ENST00000461143 C19orf67A6NJJ6 358 aa11.49□□□□□ -0.57
PCLO-208ENST00000461143 FARP1Q9Y4F1 1045 aaPredicted RBP11.49□□□□□ -0.57
PCLO-208ENST00000461143 SP7Q8TDD2 431 aaPredicted RBP11.47□□□□□ -0.57
PCLO-208ENST00000461143 EVX2Q03828 476 aa11.45□□□□□ -0.58
PCLO-208ENST00000461143 MNX1P50219 401 aaPredicted RBP11.4□□□□□ -0.58
PCLO-208ENST00000461143 CD44P16070 742 aaKnown RBP11.31□□□□□ -0.6
PCLO-208ENST00000461143 NPM1P06748 294 aaKnown RBP eCLIP11.28□□□□□ -0.6
PCLO-208ENST00000461143 FBXO3Q9UK99 471 aa11.26□□□□□ -0.61
PCLO-208ENST00000461143 MIER1Q8N108 512 aa11.25□□□□□ -0.61
PCLO-208ENST00000461143 ZNF579Q8NAF0 562 aaKnown RBP11.22□□□□□ -0.61
PCLO-208ENST00000461143 PLEKHG5O94827 1062 aa11.21□□□□□ -0.61
PCLO-208ENST00000461143 GABBR2O75899 941 aa11.2□□□□□ -0.62
PCLO-208ENST00000461143 CLCN6P51797 869 aa11.2□□□□□ -0.62
PCLO-208ENST00000461143 PLCD3Q8N3E9 789 aa11.18□□□□□ -0.62
PCLO-208ENST00000461143 ZRANB1Q9UGI0 708 aa11.18□□□□□ -0.62
PCLO-208ENST00000461143 PAK3O75914 559 aaPredicted RBP11.14□□□□□ -0.63
PCLO-208ENST00000461143 ZBTB47Q9UFB7 747 aaPredicted RBP11.14□□□□□ -0.63
PCLO-208ENST00000461143 VASPP50552 380 aaPredicted RBP11.12□□□□□ -0.63
PCLO-208ENST00000461143 NUBP1P53384 320 aa11.08□□□□□ -0.64
PCLO-208ENST00000461143 RASEFQ8IZ41 740 aa11.08□□□□□ -0.64
PCLO-208ENST00000461143 CCDC61Q9Y6R9 512 aa11.07□□□□□ -0.64
PCLO-208ENST00000461143 PHF12Q96QT6 1004 aa11.06□□□□□ -0.64
PCLO-208ENST00000461143 TSPYL2Q9H2G4 693 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 282.8 ms