RNA–Protein interactions for RNA: ENST00000460520.1

PLOD2-203, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 2, humanhuman

TSL 3

Gene PLOD2, Length 530 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD2-203ENST00000460520 AEBP2Q6ZN18 517 aaPredicted RBP34.81■■■■□ 3.16
PLOD2-203ENST00000460520 CHIC1Q5VXU3 224 aa32.4■■■□□ 2.78
PLOD2-203ENST00000460520 SENP3Q9H4L4 574 aaPredicted RBP29.69■■■□□ 2.34
PLOD2-203ENST00000460520 PHF23Q9BUL5 403 aaPredicted RBP29.24■■■□□ 2.27
PLOD2-203ENST00000460520 FOXD1Q16676 465 aa27.82■■■□□ 2.04
PLOD2-203ENST00000460520 POTEDQ86YR6 584 aa26.81■■□□□ 1.88
PLOD2-203ENST00000460520 MSH5O43196 834 aa26.22■■□□□ 1.79
PLOD2-203ENST00000460520 PIAS4Q8N2W9 510 aaPredicted RBP25.78■■□□□ 1.72
PLOD2-203ENST00000460520 PPP6R1Q9UPN7 881 aa25.53■■□□□ 1.68
PLOD2-203ENST00000460520 PLPPR3Q6T4P5 718 aa25.48■■□□□ 1.67
PLOD2-203ENST00000460520 ADRA2BP18089 450 aa25.37■■□□□ 1.65
PLOD2-203ENST00000460520 MAPK8IP2Q13387 824 aaPredicted RBP23.52■■□□□ 1.36
PLOD2-203ENST00000460520 DMRT2Q9Y5R5 561 aa23.48■■□□□ 1.35
PLOD2-203ENST00000460520 SCAF1Q9H7N4 1312 aaKnown RBP23.1■■□□□ 1.29
PLOD2-203ENST00000460520 CACNB1Q02641 598 aaPredicted RBP22.9■■□□□ 1.26
PLOD2-203ENST00000460520 DCAF8L1A6NGE4 600 aa22.46■■□□□ 1.19
PLOD2-203ENST00000460520 RNF39Q9H2S5 420 aa22.37■■□□□ 1.17
PLOD2-203ENST00000460520 HOXD11P31277 338 aaPredicted RBP22.36■■□□□ 1.17
PLOD2-203ENST00000460520 PPP4R3CPQ6ZMV5 832 aa22.28■■□□□ 1.16
PLOD2-203ENST00000460520 CNKSR2Q8WXI2 1034 aa22■■□□□ 1.11
PLOD2-203ENST00000460520 RNF216Q9NWF9 866 aaPredicted RBP21.98■■□□□ 1.11
PLOD2-203ENST00000460520 C1QBPQ07021 282 aaKnown RBP21.95■■□□□ 1.1
PLOD2-203ENST00000460520 DNAJC5BQ9UF47 199 aa21.7■■□□□ 1.06
PLOD2-203ENST00000460520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.22■□□□□ 0.99
PLOD2-203ENST00000460520 NCBP3Q53F19 620 aaKnown RBP21.15■□□□□ 0.98
PLOD2-203ENST00000460520 NPM3O75607 178 aaKnown RBP20.94■□□□□ 0.94
PLOD2-203ENST00000460520 POTEHQ6S545 545 aa20.85■□□□□ 0.93
PLOD2-203ENST00000460520 U3KPZ7 1027 aaPredicted RBP20.79■□□□□ 0.92
PLOD2-203ENST00000460520 DSG3P32926 999 aa20.71■□□□□ 0.91
PLOD2-203ENST00000460520 SPINK5Q9NQ38 1064 aaPredicted RBP20.69■□□□□ 0.9
PLOD2-203ENST00000460520 CAPN15O75808 1086 aa20.61■□□□□ 0.89
PLOD2-203ENST00000460520 SLC4A2P04920 1241 aa20.2■□□□□ 0.82
PLOD2-203ENST00000460520 ABCB7O75027 752 aa20.12■□□□□ 0.81
PLOD2-203ENST00000460520 TRHP20396 242 aaPredicted RBP20.12■□□□□ 0.81
PLOD2-203ENST00000460520 ZNF219Q9P2Y4 722 aaPredicted RBP20.05■□□□□ 0.8
PLOD2-203ENST00000460520 APLP2Q06481 763 aa20■□□□□ 0.79
PLOD2-203ENST00000460520 KCNA4P22459 653 aa19.94■□□□□ 0.78
PLOD2-203ENST00000460520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.84■□□□□ 0.77
PLOD2-203ENST00000460520 HNRNPUL2Q1KMD3 747 aaKnown RBP19.84■□□□□ 0.77
PLOD2-203ENST00000460520 SAMD1Q6SPF0 538 aaPredicted RBP19.73■□□□□ 0.75
PLOD2-203ENST00000460520 RBM42Q9BTD8 480 aaKnown RBP19.7■□□□□ 0.74
PLOD2-203ENST00000460520 CHRDL2Q6WN34 429 aa19.59■□□□□ 0.73
PLOD2-203ENST00000460520 POLA2Q14181 598 aa19.45■□□□□ 0.7
PLOD2-203ENST00000460520 MYCNP04198 464 aaPredicted RBP19.34■□□□□ 0.69
PLOD2-203ENST00000460520 SP7Q8TDD2 431 aaPredicted RBP19.22■□□□□ 0.67
PLOD2-203ENST00000460520 AKT1S1Q96B36 256 aa19.14■□□□□ 0.65
PLOD2-203ENST00000460520 ATF5Q9Y2D1 282 aaPredicted RBP19.03■□□□□ 0.64
PLOD2-203ENST00000460520 PIP4P2Q8N4L2 257 aa19.01■□□□□ 0.63
PLOD2-203ENST00000460520 REM2Q8IYK8 340 aaPredicted RBP18.99■□□□□ 0.63
PLOD2-203ENST00000460520 ZBTB12Q9Y330 459 aaPredicted RBP18.96■□□□□ 0.63
PLOD2-203ENST00000460520 OSCARQ8IYS5 282 aa18.88■□□□□ 0.61
PLOD2-203ENST00000460520 PITPNM1O00562 1244 aa18.82■□□□□ 0.6
PLOD2-203ENST00000460520 FXR2P51116 673 aaKnown RBP eCLIP18.79■□□□□ 0.6
PLOD2-203ENST00000460520 HAX1O00165 279 aa18.78■□□□□ 0.6
PLOD2-203ENST00000460520 FOXD4L1Q9NU39 408 aa18.77■□□□□ 0.6
PLOD2-203ENST00000460520 SLC4A1APQ9BWU0 796 aaKnown RBP18.63■□□□□ 0.57
PLOD2-203ENST00000460520 EVX2Q03828 476 aa18.61■□□□□ 0.57
PLOD2-203ENST00000460520 ZBTB22O15209 634 aa18.38■□□□□ 0.53
PLOD2-203ENST00000460520 SPDYE2BA6NHP3 402 aa18.35■□□□□ 0.53
PLOD2-203ENST00000460520 SPDYE6P0CI01 402 aa18.35■□□□□ 0.53
PLOD2-203ENST00000460520 SPDYE2Q495Y8 402 aa18.35■□□□□ 0.53
PLOD2-203ENST00000460520 PRKAR2AP13861 404 aaKnown RBP18.28■□□□□ 0.52
PLOD2-203ENST00000460520 ATXN8OSP0DMR3 200 aa18.26■□□□□ 0.51
PLOD2-203ENST00000460520 C19orf67A6NJJ6 358 aa18.21■□□□□ 0.51
PLOD2-203ENST00000460520 FBLN2P98095 1184 aa18.2■□□□□ 0.5
PLOD2-203ENST00000460520 SPDYE1Q8NFV5 336 aaPredicted RBP18.18■□□□□ 0.5
PLOD2-203ENST00000460520 CLEC11AQ9Y240 323 aa18.17■□□□□ 0.5
PLOD2-203ENST00000460520 MKRN4PQ13434 485 aaPredicted RBP18.12■□□□□ 0.49
PLOD2-203ENST00000460520 GABBR2O75899 941 aa18.09■□□□□ 0.49
PLOD2-203ENST00000460520 SSUH2Q9Y2M2 353 aa18.09■□□□□ 0.49
PLOD2-203ENST00000460520 LHX8Q68G74 356 aa18■□□□□ 0.47
PLOD2-203ENST00000460520 ZNF692Q9BU19 519 aaPredicted RBP18■□□□□ 0.47
PLOD2-203ENST00000460520 CHADLQ6NUI6 762 aa17.96■□□□□ 0.47
PLOD2-203ENST00000460520 PRR29P0C7W0 189 aa17.77■□□□□ 0.44
PLOD2-203ENST00000460520 POTEIP0CG38 1075 aa17.77■□□□□ 0.44
PLOD2-203ENST00000460520 PABPN1Q86U42 306 aaKnown RBP eCLIP17.74■□□□□ 0.43
PLOD2-203ENST00000460520 CD44P16070 742 aaKnown RBP17.66■□□□□ 0.42
PLOD2-203ENST00000460520 FARP1Q9Y4F1 1045 aaPredicted RBP17.61■□□□□ 0.41
PLOD2-203ENST00000460520 CLCN6P51797 869 aa17.5■□□□□ 0.39
PLOD2-203ENST00000460520 ZNF579Q8NAF0 562 aaKnown RBP17.39■□□□□ 0.37
PLOD2-203ENST00000460520 DCBLD2Q96PD2 775 aa17.39■□□□□ 0.37
PLOD2-203ENST00000460520 PLSCR2Q9NRY7 297 aa17.37■□□□□ 0.37
PLOD2-203ENST00000460520 ZRANB1Q9UGI0 708 aa17.3■□□□□ 0.36
PLOD2-203ENST00000460520 CREBZFQ9NS37 354 aa17.25■□□□□ 0.35
PLOD2-203ENST00000460520 GALR2O43603 387 aaPredicted RBP17.23■□□□□ 0.35
PLOD2-203ENST00000460520 OTUD5Q96G74 571 aa17.21■□□□□ 0.35
PLOD2-203ENST00000460520 POTEB2H3BUK9 544 aa17.17■□□□□ 0.34
PLOD2-203ENST00000460520 STAG3Q9UJ98 1225 aa17.06■□□□□ 0.32
PLOD2-203ENST00000460520 PHF12Q96QT6 1004 aa17.05■□□□□ 0.32
PLOD2-203ENST00000460520 PELP1Q8IZL8 1130 aaKnown RBP16.99■□□□□ 0.31
PLOD2-203ENST00000460520 POTEMA6NI47 508 aa16.98■□□□□ 0.31
PLOD2-203ENST00000460520 PAK3O75914 559 aaPredicted RBP16.94■□□□□ 0.3
PLOD2-203ENST00000460520 POTEGQ6S5H5 508 aa16.92■□□□□ 0.3
PLOD2-203ENST00000460520 MNX1P50219 401 aaPredicted RBP16.91■□□□□ 0.3
PLOD2-203ENST00000460520 CSRNP3Q8WYN3 585 aa16.87■□□□□ 0.29
PLOD2-203ENST00000460520 SPDYE4A6NLX3 237 aa16.83■□□□□ 0.28
PLOD2-203ENST00000460520 POTEJP0CG39 1038 aa16.83■□□□□ 0.28
PLOD2-203ENST00000460520 ASTLQ6HA08 431 aaPredicted RBP16.82■□□□□ 0.28
PLOD2-203ENST00000460520 NPM1P06748 294 aaKnown RBP eCLIP16.81■□□□□ 0.28
PLOD2-203ENST00000460520 METRNQ9UJH8 293 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms