RNA–Protein interactions for RNA: ENST00000460471.1

LINC01393-203, Transcript of long intergenic non-protein coding RNA 1393, humanhuman

TSL 5

Gene LINC01393, Length 784 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01393-203ENST00000460471 AEBP2Q6ZN18 517 aaPredicted RBP29.53■■■□□ 2.32
LINC01393-203ENST00000460471 CHIC1Q5VXU3 224 aa27.9■■■□□ 2.06
LINC01393-203ENST00000460471 SENP3Q9H4L4 574 aaPredicted RBP25.09■■□□□ 1.61
LINC01393-203ENST00000460471 PHF23Q9BUL5 403 aaPredicted RBP24.77■■□□□ 1.56
LINC01393-203ENST00000460471 FOXD1Q16676 465 aa23.46■■□□□ 1.35
LINC01393-203ENST00000460471 PLPPR3Q6T4P5 718 aa22.2■■□□□ 1.14
LINC01393-203ENST00000460471 MSH5O43196 834 aa21.9■■□□□ 1.1
LINC01393-203ENST00000460471 PPP6R1Q9UPN7 881 aa21.9■■□□□ 1.1
LINC01393-203ENST00000460471 PIAS4Q8N2W9 510 aaPredicted RBP21.87■■□□□ 1.09
LINC01393-203ENST00000460471 ADRA2BP18089 450 aa21.79■■□□□ 1.08
LINC01393-203ENST00000460471 POTEDQ86YR6 584 aa21.6■■□□□ 1.05
LINC01393-203ENST00000460471 MAPK8IP2Q13387 824 aaPredicted RBP20.05■□□□□ 0.8
LINC01393-203ENST00000460471 DMRT2Q9Y5R5 561 aa19.92■□□□□ 0.78
LINC01393-203ENST00000460471 SCAF1Q9H7N4 1312 aaKnown RBP19.79■□□□□ 0.76
LINC01393-203ENST00000460471 PPP4R3CPQ6ZMV5 832 aa19.48■□□□□ 0.71
LINC01393-203ENST00000460471 HOXD11P31277 338 aaPredicted RBP19.17■□□□□ 0.66
LINC01393-203ENST00000460471 CNKSR2Q8WXI2 1034 aa19.11■□□□□ 0.65
LINC01393-203ENST00000460471 DCAF8L1A6NGE4 600 aa19.03■□□□□ 0.64
LINC01393-203ENST00000460471 RNF216Q9NWF9 866 aaPredicted RBP18.96■□□□□ 0.63
LINC01393-203ENST00000460471 CACNB1Q02641 598 aaPredicted RBP18.83■□□□□ 0.6
LINC01393-203ENST00000460471 RNF39Q9H2S5 420 aa18.74■□□□□ 0.59
LINC01393-203ENST00000460471 NCBP3Q53F19 620 aaKnown RBP18.61■□□□□ 0.57
LINC01393-203ENST00000460471 DNAJC5BQ9UF47 199 aa18.48■□□□□ 0.55
LINC01393-203ENST00000460471 NPM3O75607 178 aaKnown RBP18.47■□□□□ 0.55
LINC01393-203ENST00000460471 C1QBPQ07021 282 aaKnown RBP18.4■□□□□ 0.54
LINC01393-203ENST00000460471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.18■□□□□ 0.5
LINC01393-203ENST00000460471 KCNA4P22459 653 aa18.06■□□□□ 0.48
LINC01393-203ENST00000460471 U3KPZ7 1027 aaPredicted RBP17.89■□□□□ 0.45
LINC01393-203ENST00000460471 SLC4A2P04920 1241 aa17.69■□□□□ 0.42
LINC01393-203ENST00000460471 SPINK5Q9NQ38 1064 aaPredicted RBP17.65■□□□□ 0.42
LINC01393-203ENST00000460471 CAPN15O75808 1086 aa17.54■□□□□ 0.4
LINC01393-203ENST00000460471 DSG3P32926 999 aa17.53■□□□□ 0.4
LINC01393-203ENST00000460471 TRHP20396 242 aaPredicted RBP17.25■□□□□ 0.35
LINC01393-203ENST00000460471 APLP2Q06481 763 aa17.22■□□□□ 0.35
LINC01393-203ENST00000460471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.21■□□□□ 0.35
LINC01393-203ENST00000460471 HNRNPUL2Q1KMD3 747 aaKnown RBP17.21■□□□□ 0.35
LINC01393-203ENST00000460471 ZNF219Q9P2Y4 722 aaPredicted RBP17.21■□□□□ 0.35
LINC01393-203ENST00000460471 ABCB7O75027 752 aa17.19■□□□□ 0.34
LINC01393-203ENST00000460471 SAMD1Q6SPF0 538 aaPredicted RBP17.15■□□□□ 0.34
LINC01393-203ENST00000460471 MYCNP04198 464 aaPredicted RBP17.04■□□□□ 0.32
LINC01393-203ENST00000460471 SLC4A1APQ9BWU0 796 aaKnown RBP16.97■□□□□ 0.31
LINC01393-203ENST00000460471 POTEHQ6S545 545 aa16.88■□□□□ 0.29
LINC01393-203ENST00000460471 FOXD4L1Q9NU39 408 aa16.84■□□□□ 0.29
LINC01393-203ENST00000460471 POLA2Q14181 598 aa16.78■□□□□ 0.28
LINC01393-203ENST00000460471 ATF5Q9Y2D1 282 aaPredicted RBP16.74■□□□□ 0.27
LINC01393-203ENST00000460471 ZBTB22O15209 634 aa16.66■□□□□ 0.26
LINC01393-203ENST00000460471 RBM42Q9BTD8 480 aaKnown RBP16.64■□□□□ 0.25
LINC01393-203ENST00000460471 ZBTB12Q9Y330 459 aaPredicted RBP16.38■□□□□ 0.21
LINC01393-203ENST00000460471 CHRDL2Q6WN34 429 aa16.36■□□□□ 0.21
LINC01393-203ENST00000460471 OSCARQ8IYS5 282 aa16.31■□□□□ 0.2
LINC01393-203ENST00000460471 ATXN8OSP0DMR3 200 aa16.28■□□□□ 0.2
LINC01393-203ENST00000460471 AKT1S1Q96B36 256 aa16.27■□□□□ 0.2
LINC01393-203ENST00000460471 REM2Q8IYK8 340 aaPredicted RBP16.14■□□□□ 0.17
LINC01393-203ENST00000460471 PITPNM1O00562 1244 aa16.01■□□□□ 0.15
LINC01393-203ENST00000460471 PIP4P2Q8N4L2 257 aa15.98■□□□□ 0.15
LINC01393-203ENST00000460471 MKRN4PQ13434 485 aaPredicted RBP15.96■□□□□ 0.15
LINC01393-203ENST00000460471 FBLN2P98095 1184 aa15.94■□□□□ 0.14
LINC01393-203ENST00000460471 SPDYE2BA6NHP3 402 aa15.91■□□□□ 0.14
LINC01393-203ENST00000460471 SPDYE6P0CI01 402 aa15.91■□□□□ 0.14
LINC01393-203ENST00000460471 SPDYE2Q495Y8 402 aa15.91■□□□□ 0.14
LINC01393-203ENST00000460471 FXR2P51116 673 aaKnown RBP eCLIP15.87■□□□□ 0.13
LINC01393-203ENST00000460471 SP7Q8TDD2 431 aaPredicted RBP15.78■□□□□ 0.12
LINC01393-203ENST00000460471 CSRNP3Q8WYN3 585 aa15.76■□□□□ 0.11
LINC01393-203ENST00000460471 SSUH2Q9Y2M2 353 aa15.75■□□□□ 0.11
LINC01393-203ENST00000460471 ZNF692Q9BU19 519 aaPredicted RBP15.69■□□□□ 0.1
LINC01393-203ENST00000460471 HAX1O00165 279 aa15.63■□□□□ 0.09
LINC01393-203ENST00000460471 SPDYE1Q8NFV5 336 aaPredicted RBP15.63■□□□□ 0.09
LINC01393-203ENST00000460471 CLEC11AQ9Y240 323 aa15.61■□□□□ 0.09
LINC01393-203ENST00000460471 EVX2Q03828 476 aa15.56■□□□□ 0.08
LINC01393-203ENST00000460471 PRKAR2AP13861 404 aaKnown RBP15.55■□□□□ 0.08
LINC01393-203ENST00000460471 PABPN1Q86U42 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
LINC01393-203ENST00000460471 EHMT2Q96KQ7 1210 aa15.48■□□□□ 0.07
LINC01393-203ENST00000460471 CHADLQ6NUI6 762 aa15.4■□□□□ 0.06
LINC01393-203ENST00000460471 C19orf67A6NJJ6 358 aa15.36■□□□□ 0.05
LINC01393-203ENST00000460471 PRR29P0C7W0 189 aa15.33■□□□□ 0.04
LINC01393-203ENST00000460471 GABBR2O75899 941 aa15.14■□□□□ 0.01
LINC01393-203ENST00000460471 FARP1Q9Y4F1 1045 aaPredicted RBP15.12■□□□□ 0.01
LINC01393-203ENST00000460471 SPDYE4A6NLX3 237 aa15.08■□□□□ 0
LINC01393-203ENST00000460471 CD44P16070 742 aaKnown RBP15.05■□□□□ -0
LINC01393-203ENST00000460471 CREBZFQ9NS37 354 aa15.02■□□□□ -0
LINC01393-203ENST00000460471 STAG3Q9UJ98 1225 aa14.97□□□□□ -0.01
LINC01393-203ENST00000460471 POTEIP0CG38 1075 aa14.89□□□□□ -0.03
LINC01393-203ENST00000460471 ZNF579Q8NAF0 562 aaKnown RBP14.84□□□□□ -0.03
LINC01393-203ENST00000460471 ZRANB1Q9UGI0 708 aa14.81□□□□□ -0.04
LINC01393-203ENST00000460471 MNX1P50219 401 aaPredicted RBP14.79□□□□□ -0.04
LINC01393-203ENST00000460471 PROM2Q8N271 834 aa14.79□□□□□ -0.04
LINC01393-203ENST00000460471 LHX8Q68G74 356 aa14.78□□□□□ -0.04
LINC01393-203ENST00000460471 CLCN6P51797 869 aa14.77□□□□□ -0.05
LINC01393-203ENST00000460471 GALR2O43603 387 aaPredicted RBP14.69□□□□□ -0.06
LINC01393-203ENST00000460471 DCBLD2Q96PD2 775 aa14.65□□□□□ -0.06
LINC01393-203ENST00000460471 PHF12Q96QT6 1004 aa14.65□□□□□ -0.06
LINC01393-203ENST00000460471 NPM1P06748 294 aaKnown RBP eCLIP14.62□□□□□ -0.07
LINC01393-203ENST00000460471 PAK3O75914 559 aaPredicted RBP14.6□□□□□ -0.07
LINC01393-203ENST00000460471 MS4A3Q96HJ5 214 aa14.46□□□□□ -0.09
LINC01393-203ENST00000460471 PELP1Q8IZL8 1130 aaKnown RBP14.43□□□□□ -0.1
LINC01393-203ENST00000460471 TSPYL2Q9H2G4 693 aaPredicted RBP14.41□□□□□ -0.1
LINC01393-203ENST00000460471 CCDC61Q9Y6R9 512 aa14.41□□□□□ -0.1
LINC01393-203ENST00000460471 POTEB2H3BUK9 544 aa14.4□□□□□ -0.1
LINC01393-203ENST00000460471 ASTLQ6HA08 431 aaPredicted RBP14.36□□□□□ -0.11
LINC01393-203ENST00000460471 MIER1Q8N108 512 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms