RNA–Protein interactions for RNA: ENST00000460438.5

ETV1-216, Transcript of ETS variant 1, humanhuman

TSL 4

Gene ETV1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETV1-216ENST00000460438 AEBP2Q6ZN18 517 aaPredicted RBP29.29■■■□□ 2.28
ETV1-216ENST00000460438 CHIC1Q5VXU3 224 aa28.18■■■□□ 2.1
ETV1-216ENST00000460438 SENP3Q9H4L4 574 aaPredicted RBP25.02■■□□□ 1.6
ETV1-216ENST00000460438 PHF23Q9BUL5 403 aaPredicted RBP24.71■■□□□ 1.55
ETV1-216ENST00000460438 FOXD1Q16676 465 aa23.23■■□□□ 1.31
ETV1-216ENST00000460438 PLPPR3Q6T4P5 718 aa22.71■■□□□ 1.23
ETV1-216ENST00000460438 PPP6R1Q9UPN7 881 aa21.95■■□□□ 1.1
ETV1-216ENST00000460438 ADRA2BP18089 450 aa21.92■■□□□ 1.1
ETV1-216ENST00000460438 PIAS4Q8N2W9 510 aaPredicted RBP21.82■■□□□ 1.08
ETV1-216ENST00000460438 MSH5O43196 834 aa21.66■■□□□ 1.06
ETV1-216ENST00000460438 POTEDQ86YR6 584 aa20.51■□□□□ 0.87
ETV1-216ENST00000460438 SCAF1Q9H7N4 1312 aaKnown RBP20.15■□□□□ 0.82
ETV1-216ENST00000460438 MAPK8IP2Q13387 824 aaPredicted RBP20.01■□□□□ 0.79
ETV1-216ENST00000460438 PPP4R3CPQ6ZMV5 832 aa19.92■□□□□ 0.78
ETV1-216ENST00000460438 DMRT2Q9Y5R5 561 aa19.86■□□□□ 0.77
ETV1-216ENST00000460438 CNKSR2Q8WXI2 1034 aa19.49■□□□□ 0.71
ETV1-216ENST00000460438 NCBP3Q53F19 620 aaKnown RBP19.32■□□□□ 0.68
ETV1-216ENST00000460438 HOXD11P31277 338 aaPredicted RBP19.26■□□□□ 0.67
ETV1-216ENST00000460438 RNF216Q9NWF9 866 aaPredicted RBP19.23■□□□□ 0.67
ETV1-216ENST00000460438 DCAF8L1A6NGE4 600 aa19.08■□□□□ 0.64
ETV1-216ENST00000460438 NPM3O75607 178 aaKnown RBP18.97■□□□□ 0.63
ETV1-216ENST00000460438 KCNA4P22459 653 aa18.9■□□□□ 0.62
ETV1-216ENST00000460438 DNAJC5BQ9UF47 199 aa18.55■□□□□ 0.56
ETV1-216ENST00000460438 RNF39Q9H2S5 420 aa18.48■□□□□ 0.55
ETV1-216ENST00000460438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.4■□□□□ 0.54
ETV1-216ENST00000460438 CACNB1Q02641 598 aaPredicted RBP18.39■□□□□ 0.53
ETV1-216ENST00000460438 C1QBPQ07021 282 aaKnown RBP18.26■□□□□ 0.51
ETV1-216ENST00000460438 SLC4A2P04920 1241 aa18.01■□□□□ 0.47
ETV1-216ENST00000460438 U3KPZ7 1027 aaPredicted RBP17.99■□□□□ 0.47
ETV1-216ENST00000460438 SLC4A1APQ9BWU0 796 aaKnown RBP17.95■□□□□ 0.46
ETV1-216ENST00000460438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.68■□□□□ 0.42
ETV1-216ENST00000460438 HNRNPUL2Q1KMD3 747 aaKnown RBP17.68■□□□□ 0.42
ETV1-216ENST00000460438 CAPN15O75808 1086 aa17.64■□□□□ 0.41
ETV1-216ENST00000460438 APLP2Q06481 763 aa17.63■□□□□ 0.41
ETV1-216ENST00000460438 SPINK5Q9NQ38 1064 aaPredicted RBP17.63■□□□□ 0.41
ETV1-216ENST00000460438 SAMD1Q6SPF0 538 aaPredicted RBP17.58■□□□□ 0.4
ETV1-216ENST00000460438 MYCNP04198 464 aaPredicted RBP17.57■□□□□ 0.4
ETV1-216ENST00000460438 FOXD4L1Q9NU39 408 aa17.56■□□□□ 0.4
ETV1-216ENST00000460438 ZNF219Q9P2Y4 722 aaPredicted RBP17.43■□□□□ 0.38
ETV1-216ENST00000460438 TRHP20396 242 aaPredicted RBP17.42■□□□□ 0.38
ETV1-216ENST00000460438 DSG3P32926 999 aa17.41■□□□□ 0.38
ETV1-216ENST00000460438 ZBTB22O15209 634 aa17.34■□□□□ 0.37
ETV1-216ENST00000460438 ABCB7O75027 752 aa17.22■□□□□ 0.35
ETV1-216ENST00000460438 ATF5Q9Y2D1 282 aaPredicted RBP17.07■□□□□ 0.32
ETV1-216ENST00000460438 POLA2Q14181 598 aa17.02■□□□□ 0.32
ETV1-216ENST00000460438 ATXN8OSP0DMR3 200 aa17.01■□□□□ 0.31
ETV1-216ENST00000460438 CSRNP3Q8WYN3 585 aa16.88■□□□□ 0.29
ETV1-216ENST00000460438 EHMT2Q96KQ7 1210 aa16.87■□□□□ 0.29
ETV1-216ENST00000460438 ZBTB12Q9Y330 459 aaPredicted RBP16.76■□□□□ 0.27
ETV1-216ENST00000460438 RBM42Q9BTD8 480 aaKnown RBP16.67■□□□□ 0.26
ETV1-216ENST00000460438 FBLN2P98095 1184 aa16.5■□□□□ 0.23
ETV1-216ENST00000460438 OSCARQ8IYS5 282 aa16.46■□□□□ 0.23
ETV1-216ENST00000460438 AKT1S1Q96B36 256 aa16.34■□□□□ 0.21
ETV1-216ENST00000460438 MKRN4PQ13434 485 aaPredicted RBP16.32■□□□□ 0.2
ETV1-216ENST00000460438 SPDYE2BA6NHP3 402 aa16.24■□□□□ 0.19
ETV1-216ENST00000460438 SPDYE6P0CI01 402 aa16.24■□□□□ 0.19
ETV1-216ENST00000460438 SPDYE2Q495Y8 402 aa16.24■□□□□ 0.19
ETV1-216ENST00000460438 POTEHQ6S545 545 aa16.16■□□□□ 0.18
ETV1-216ENST00000460438 REM2Q8IYK8 340 aaPredicted RBP16.16■□□□□ 0.18
ETV1-216ENST00000460438 CHRDL2Q6WN34 429 aa16.14■□□□□ 0.17
ETV1-216ENST00000460438 ZNF692Q9BU19 519 aaPredicted RBP16.1■□□□□ 0.17
ETV1-216ENST00000460438 SSUH2Q9Y2M2 353 aa16.03■□□□□ 0.16
ETV1-216ENST00000460438 PITPNM1O00562 1244 aa15.97■□□□□ 0.15
ETV1-216ENST00000460438 SPDYE1Q8NFV5 336 aaPredicted RBP15.89■□□□□ 0.13
ETV1-216ENST00000460438 PABPN1Q86U42 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
ETV1-216ENST00000460438 CLEC11AQ9Y240 323 aa15.84■□□□□ 0.13
ETV1-216ENST00000460438 PIP4P2Q8N4L2 257 aa15.8■□□□□ 0.12
ETV1-216ENST00000460438 SPDYE4A6NLX3 237 aa15.78■□□□□ 0.12
ETV1-216ENST00000460438 FXR2P51116 673 aaKnown RBP eCLIP15.77■□□□□ 0.12
ETV1-216ENST00000460438 PRR29P0C7W0 189 aa15.62■□□□□ 0.09
ETV1-216ENST00000460438 PRKAR2AP13861 404 aaKnown RBP15.58■□□□□ 0.08
ETV1-216ENST00000460438 STAG3Q9UJ98 1225 aa15.54■□□□□ 0.08
ETV1-216ENST00000460438 HAX1O00165 279 aa15.47■□□□□ 0.07
ETV1-216ENST00000460438 CHADLQ6NUI6 762 aa15.45■□□□□ 0.06
ETV1-216ENST00000460438 PROM2Q8N271 834 aa15.41■□□□□ 0.06
ETV1-216ENST00000460438 FKBP8Q14318 412 aa15.33■□□□□ 0.04
ETV1-216ENST00000460438 SP7Q8TDD2 431 aaPredicted RBP15.31■□□□□ 0.04
ETV1-216ENST00000460438 FARP1Q9Y4F1 1045 aaPredicted RBP15.28■□□□□ 0.04
ETV1-216ENST00000460438 CREBZFQ9NS37 354 aa15.27■□□□□ 0.04
ETV1-216ENST00000460438 C19orf67A6NJJ6 358 aa15.24■□□□□ 0.03
ETV1-216ENST00000460438 EVX2Q03828 476 aa15.22■□□□□ 0.03
ETV1-216ENST00000460438 CD44P16070 742 aaKnown RBP15.12■□□□□ 0.01
ETV1-216ENST00000460438 NPM1P06748 294 aaKnown RBP eCLIP15.07■□□□□ 0
ETV1-216ENST00000460438 PLEKHG5O94827 1062 aa15.04■□□□□ -0
ETV1-216ENST00000460438 MNX1P50219 401 aaPredicted RBP15.03■□□□□ -0
ETV1-216ENST00000460438 MIER1Q8N108 512 aa15.03■□□□□ -0
ETV1-216ENST00000460438 PLCD3Q8N3E9 789 aa14.97□□□□□ -0.01
ETV1-216ENST00000460438 PAK3O75914 559 aaPredicted RBP14.96□□□□□ -0.01
ETV1-216ENST00000460438 ZRANB1Q9UGI0 708 aa14.96□□□□□ -0.01
ETV1-216ENST00000460438 FBXO3Q9UK99 471 aa14.96□□□□□ -0.01
ETV1-216ENST00000460438 GABBR2O75899 941 aa14.93□□□□□ -0.02
ETV1-216ENST00000460438 CLCN6P51797 869 aa14.89□□□□□ -0.03
ETV1-216ENST00000460438 ZNF579Q8NAF0 562 aaKnown RBP14.89□□□□□ -0.03
ETV1-216ENST00000460438 ZBTB47Q9UFB7 747 aaPredicted RBP14.85□□□□□ -0.03
ETV1-216ENST00000460438 TSPYL2Q9H2G4 693 aaPredicted RBP14.78□□□□□ -0.04
ETV1-216ENST00000460438 PHF12Q96QT6 1004 aa14.75□□□□□ -0.05
ETV1-216ENST00000460438 VASPP50552 380 aaPredicted RBP14.73□□□□□ -0.05
ETV1-216ENST00000460438 RASEFQ8IZ41 740 aa14.7□□□□□ -0.06
ETV1-216ENST00000460438 CCDC61Q9Y6R9 512 aa14.67□□□□□ -0.06
ETV1-216ENST00000460438 GALR2O43603 387 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms