RNA–Protein interactions for RNA: ENST00000460278.5

ANKRD28-205, Transcript of ankyrin repeat domain 28, humanhuman

TSL 4

Gene ANKRD28, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-205ENST00000460278 AEBP2Q6ZN18 517 aaPredicted RBP14.98□□□□□ -0.01
ANKRD28-205ENST00000460278 CHIC1Q5VXU3 224 aa14.33□□□□□ -0.12
ANKRD28-205ENST00000460278 SENP3Q9H4L4 574 aaPredicted RBP12.83□□□□□ -0.36
ANKRD28-205ENST00000460278 PHF23Q9BUL5 403 aaPredicted RBP12.66□□□□□ -0.38
ANKRD28-205ENST00000460278 FOXD1Q16676 465 aa11.91□□□□□ -0.5
ANKRD28-205ENST00000460278 PLPPR3Q6T4P5 718 aa11.51□□□□□ -0.57
ANKRD28-205ENST00000460278 PIAS4Q8N2W9 510 aaPredicted RBP11.2□□□□□ -0.62
ANKRD28-205ENST00000460278 MSH5O43196 834 aa11.17□□□□□ -0.62
ANKRD28-205ENST00000460278 ADRA2BP18089 450 aa11.17□□□□□ -0.62
ANKRD28-205ENST00000460278 PPP6R1Q9UPN7 881 aa11.17□□□□□ -0.62
ANKRD28-205ENST00000460278 POTEDQ86YR6 584 aa10.73□□□□□ -0.69
ANKRD28-205ENST00000460278 SCAF1Q9H7N4 1312 aaKnown RBP10.29□□□□□ -0.76
ANKRD28-205ENST00000460278 MAPK8IP2Q13387 824 aaPredicted RBP10.23□□□□□ -0.77
ANKRD28-205ENST00000460278 DMRT2Q9Y5R5 561 aa10.16□□□□□ -0.78
ANKRD28-205ENST00000460278 PPP4R3CPQ6ZMV5 832 aa10.1□□□□□ -0.79
ANKRD28-205ENST00000460278 CNKSR2Q8WXI2 1034 aa9.89□□□□□ -0.83
ANKRD28-205ENST00000460278 DCAF8L1A6NGE4 600 aa9.82□□□□□ -0.84
ANKRD28-205ENST00000460278 HOXD11P31277 338 aaPredicted RBP9.81□□□□□ -0.84
ANKRD28-205ENST00000460278 NCBP3Q53F19 620 aaKnown RBP9.78□□□□□ -0.84
ANKRD28-205ENST00000460278 RNF216Q9NWF9 866 aaPredicted RBP9.78□□□□□ -0.84
ANKRD28-205ENST00000460278 NPM3O75607 178 aaKnown RBP9.57□□□□□ -0.88
ANKRD28-205ENST00000460278 CACNB1Q02641 598 aaPredicted RBP9.56□□□□□ -0.88
ANKRD28-205ENST00000460278 RNF39Q9H2S5 420 aa9.49□□□□□ -0.89
ANKRD28-205ENST00000460278 KCNA4P22459 653 aa9.46□□□□□ -0.9
ANKRD28-205ENST00000460278 DNAJC5BQ9UF47 199 aa9.45□□□□□ -0.9
ANKRD28-205ENST00000460278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.41□□□□□ -0.9
ANKRD28-205ENST00000460278 C1QBPQ07021 282 aaKnown RBP9.39□□□□□ -0.91
ANKRD28-205ENST00000460278 U3KPZ7 1027 aaPredicted RBP9.17□□□□□ -0.94
ANKRD28-205ENST00000460278 SLC4A2P04920 1241 aa9.1□□□□□ -0.95
ANKRD28-205ENST00000460278 CAPN15O75808 1086 aa9.05□□□□□ -0.96
ANKRD28-205ENST00000460278 SPINK5Q9NQ38 1064 aaPredicted RBP9.01□□□□□ -0.97
ANKRD28-205ENST00000460278 APLP2Q06481 763 aa9□□□□□ -0.97
ANKRD28-205ENST00000460278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.99□□□□□ -0.97
ANKRD28-205ENST00000460278 HNRNPUL2Q1KMD3 747 aaKnown RBP8.99□□□□□ -0.97
ANKRD28-205ENST00000460278 SLC4A1APQ9BWU0 796 aaKnown RBP8.98□□□□□ -0.97
ANKRD28-205ENST00000460278 TRHP20396 242 aaPredicted RBP8.93□□□□□ -0.98
ANKRD28-205ENST00000460278 SAMD1Q6SPF0 538 aaPredicted RBP8.93□□□□□ -0.98
ANKRD28-205ENST00000460278 DSG3P32926 999 aa8.92□□□□□ -0.98
ANKRD28-205ENST00000460278 ZNF219Q9P2Y4 722 aaPredicted RBP8.9□□□□□ -0.98
ANKRD28-205ENST00000460278 MYCNP04198 464 aaPredicted RBP8.88□□□□□ -0.99
ANKRD28-205ENST00000460278 ABCB7O75027 752 aa8.83□□□□□ -1
ANKRD28-205ENST00000460278 FOXD4L1Q9NU39 408 aa8.83□□□□□ -1
ANKRD28-205ENST00000460278 POLA2Q14181 598 aa8.68□□□□□ -1.02
ANKRD28-205ENST00000460278 ZBTB22O15209 634 aa8.66□□□□□ -1.02
ANKRD28-205ENST00000460278 ATF5Q9Y2D1 282 aaPredicted RBP8.62□□□□□ -1.03
ANKRD28-205ENST00000460278 RBM42Q9BTD8 480 aaKnown RBP8.57□□□□□ -1.04
ANKRD28-205ENST00000460278 ATXN8OSP0DMR3 200 aa8.53□□□□□ -1.04
ANKRD28-205ENST00000460278 ZBTB12Q9Y330 459 aaPredicted RBP8.53□□□□□ -1.04
ANKRD28-205ENST00000460278 POTEHQ6S545 545 aa8.45□□□□□ -1.06
ANKRD28-205ENST00000460278 OSCARQ8IYS5 282 aa8.39□□□□□ -1.07
ANKRD28-205ENST00000460278 FBLN2P98095 1184 aa8.37□□□□□ -1.07
ANKRD28-205ENST00000460278 AKT1S1Q96B36 256 aa8.36□□□□□ -1.07
ANKRD28-205ENST00000460278 CSRNP3Q8WYN3 585 aa8.35□□□□□ -1.07
ANKRD28-205ENST00000460278 EHMT2Q96KQ7 1210 aa8.34□□□□□ -1.07
ANKRD28-205ENST00000460278 CHRDL2Q6WN34 429 aa8.32□□□□□ -1.08
ANKRD28-205ENST00000460278 REM2Q8IYK8 340 aaPredicted RBP8.27□□□□□ -1.09
ANKRD28-205ENST00000460278 SPDYE2BA6NHP3 402 aa8.25□□□□□ -1.09
ANKRD28-205ENST00000460278 SPDYE6P0CI01 402 aa8.25□□□□□ -1.09
ANKRD28-205ENST00000460278 SPDYE2Q495Y8 402 aa8.25□□□□□ -1.09
ANKRD28-205ENST00000460278 MKRN4PQ13434 485 aaPredicted RBP8.23□□□□□ -1.09
ANKRD28-205ENST00000460278 PITPNM1O00562 1244 aa8.18□□□□□ -1.1
ANKRD28-205ENST00000460278 ZNF692Q9BU19 519 aaPredicted RBP8.18□□□□□ -1.1
ANKRD28-205ENST00000460278 PIP4P2Q8N4L2 257 aa8.13□□□□□ -1.11
ANKRD28-205ENST00000460278 SSUH2Q9Y2M2 353 aa8.12□□□□□ -1.11
ANKRD28-205ENST00000460278 SPDYE1Q8NFV5 336 aaPredicted RBP8.11□□□□□ -1.11
ANKRD28-205ENST00000460278 CLEC11AQ9Y240 323 aa8.11□□□□□ -1.11
ANKRD28-205ENST00000460278 FXR2P51116 673 aaKnown RBP eCLIP8.07□□□□□ -1.12
ANKRD28-205ENST00000460278 PABPN1Q86U42 306 aaKnown RBP eCLIP8.05□□□□□ -1.12
ANKRD28-205ENST00000460278 HAX1O00165 279 aa8□□□□□ -1.13
ANKRD28-205ENST00000460278 PRKAR2AP13861 404 aaKnown RBP7.99□□□□□ -1.13
ANKRD28-205ENST00000460278 PRR29P0C7W0 189 aa7.98□□□□□ -1.13
ANKRD28-205ENST00000460278 SP7Q8TDD2 431 aaPredicted RBP7.96□□□□□ -1.14
ANKRD28-205ENST00000460278 SPDYE4A6NLX3 237 aa7.94□□□□□ -1.14
ANKRD28-205ENST00000460278 CHADLQ6NUI6 762 aa7.9□□□□□ -1.14
ANKRD28-205ENST00000460278 STAG3Q9UJ98 1225 aa7.87□□□□□ -1.15
ANKRD28-205ENST00000460278 SLC24A1O60721 1099 aa7.83□□□□□ -1.16
ANKRD28-205ENST00000460278 EVX2Q03828 476 aa7.83□□□□□ -1.16
ANKRD28-205ENST00000460278 C19orf67A6NJJ6 358 aa7.82□□□□□ -1.16
ANKRD28-205ENST00000460278 FARP1Q9Y4F1 1045 aaPredicted RBP7.8□□□□□ -1.16
ANKRD28-205ENST00000460278 CD44P16070 742 aaKnown RBP7.74□□□□□ -1.17
ANKRD28-205ENST00000460278 CREBZFQ9NS37 354 aa7.74□□□□□ -1.17
ANKRD28-205ENST00000460278 GABBR2O75899 941 aa7.7□□□□□ -1.18
ANKRD28-205ENST00000460278 PROM2Q8N271 834 aa7.68□□□□□ -1.18
ANKRD28-205ENST00000460278 NPM1P06748 294 aaKnown RBP eCLIP7.66□□□□□ -1.18
ANKRD28-205ENST00000460278 ZRANB1Q9UGI0 708 aa7.66□□□□□ -1.18
ANKRD28-205ENST00000460278 PAK3O75914 559 aaPredicted RBP7.65□□□□□ -1.18
ANKRD28-205ENST00000460278 AMER1Q5JTC6 1135 aaPredicted RBP7.64□□□□□ -1.19
ANKRD28-205ENST00000460278 PLEKHG5O94827 1062 aa7.62□□□□□ -1.19
ANKRD28-205ENST00000460278 CLCN6P51797 869 aa7.62□□□□□ -1.19
ANKRD28-205ENST00000460278 FKBP8Q14318 412 aa7.62□□□□□ -1.19
ANKRD28-205ENST00000460278 ZNF579Q8NAF0 562 aaKnown RBP7.6□□□□□ -1.19
ANKRD28-205ENST00000460278 MNX1P50219 401 aaPredicted RBP7.59□□□□□ -1.19
ANKRD28-205ENST00000460278 MIER1Q8N108 512 aa7.59□□□□□ -1.19
ANKRD28-205ENST00000460278 DCBLD2Q96PD2 775 aa7.56□□□□□ -1.2
ANKRD28-205ENST00000460278 PLCD3Q8N3E9 789 aa7.55□□□□□ -1.2
ANKRD28-205ENST00000460278 PHF12Q96QT6 1004 aa7.53□□□□□ -1.2
ANKRD28-205ENST00000460278 RTN4Q9NQC3 1192 aaKnown RBP7.52□□□□□ -1.21
ANKRD28-205ENST00000460278 GALR2O43603 387 aaPredicted RBP7.51□□□□□ -1.21
ANKRD28-205ENST00000460278 TSPYL2Q9H2G4 693 aaPredicted RBP7.51□□□□□ -1.21
ANKRD28-205ENST00000460278 POTEIP0CG38 1075 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms