RNA–Protein interactions for RNA: ENST00000459939.5

LCA5L-213, Transcript of LCA5L, lebercilin like, humanhuman

TSL 3

Gene LCA5L, Length 775 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5L-213ENST00000459939 AEBP2Q6ZN18 517 aaPredicted RBP27.89■■■□□ 2.06
LCA5L-213ENST00000459939 CHIC1Q5VXU3 224 aa26.17■■□□□ 1.78
LCA5L-213ENST00000459939 SENP3Q9H4L4 574 aaPredicted RBP23.88■■□□□ 1.41
LCA5L-213ENST00000459939 PHF23Q9BUL5 403 aaPredicted RBP23.52■■□□□ 1.36
LCA5L-213ENST00000459939 FOXD1Q16676 465 aa22.28■■□□□ 1.16
LCA5L-213ENST00000459939 POTEDQ86YR6 584 aa21.08■□□□□ 0.97
LCA5L-213ENST00000459939 MSH5O43196 834 aa21.01■□□□□ 0.95
LCA5L-213ENST00000459939 PLPPR3Q6T4P5 718 aa20.76■□□□□ 0.91
LCA5L-213ENST00000459939 PIAS4Q8N2W9 510 aaPredicted RBP20.75■□□□□ 0.91
LCA5L-213ENST00000459939 PPP6R1Q9UPN7 881 aa20.57■□□□□ 0.88
LCA5L-213ENST00000459939 ADRA2BP18089 450 aa20.49■□□□□ 0.87
LCA5L-213ENST00000459939 MAPK8IP2Q13387 824 aaPredicted RBP18.92■□□□□ 0.62
LCA5L-213ENST00000459939 DMRT2Q9Y5R5 561 aa18.87■□□□□ 0.61
LCA5L-213ENST00000459939 SCAF1Q9H7N4 1312 aaKnown RBP18.77■□□□□ 0.6
LCA5L-213ENST00000459939 CACNB1Q02641 598 aaPredicted RBP18.25■□□□□ 0.51
LCA5L-213ENST00000459939 PPP4R3CPQ6ZMV5 832 aa18.15■□□□□ 0.5
LCA5L-213ENST00000459939 DCAF8L1A6NGE4 600 aa18.14■□□□□ 0.49
LCA5L-213ENST00000459939 HOXD11P31277 338 aaPredicted RBP18.04■□□□□ 0.48
LCA5L-213ENST00000459939 CNKSR2Q8WXI2 1034 aa17.89■□□□□ 0.45
LCA5L-213ENST00000459939 RNF39Q9H2S5 420 aa17.88■□□□□ 0.45
LCA5L-213ENST00000459939 RNF216Q9NWF9 866 aaPredicted RBP17.82■□□□□ 0.44
LCA5L-213ENST00000459939 C1QBPQ07021 282 aaKnown RBP17.61■□□□□ 0.41
LCA5L-213ENST00000459939 DNAJC5BQ9UF47 199 aa17.5■□□□□ 0.39
LCA5L-213ENST00000459939 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
LCA5L-213ENST00000459939 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.21■□□□□ 0.35
LCA5L-213ENST00000459939 NPM3O75607 178 aaKnown RBP17.09■□□□□ 0.33
LCA5L-213ENST00000459939 U3KPZ7 1027 aaPredicted RBP16.78■□□□□ 0.28
LCA5L-213ENST00000459939 CAPN15O75808 1086 aa16.66■□□□□ 0.26
LCA5L-213ENST00000459939 SPINK5Q9NQ38 1064 aaPredicted RBP16.65■□□□□ 0.26
LCA5L-213ENST00000459939 DSG3P32926 999 aa16.62■□□□□ 0.25
LCA5L-213ENST00000459939 POTEHQ6S545 545 aa16.46■□□□□ 0.23
LCA5L-213ENST00000459939 KCNA4P22459 653 aa16.45■□□□□ 0.22
LCA5L-213ENST00000459939 SLC4A2P04920 1241 aa16.41■□□□□ 0.22
LCA5L-213ENST00000459939 TRHP20396 242 aaPredicted RBP16.31■□□□□ 0.2
LCA5L-213ENST00000459939 APLP2Q06481 763 aa16.31■□□□□ 0.2
LCA5L-213ENST00000459939 ZNF219Q9P2Y4 722 aaPredicted RBP16.27■□□□□ 0.2
LCA5L-213ENST00000459939 ABCB7O75027 752 aa16.23■□□□□ 0.19
LCA5L-213ENST00000459939 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.22■□□□□ 0.19
LCA5L-213ENST00000459939 HNRNPUL2Q1KMD3 747 aaKnown RBP16.22■□□□□ 0.19
LCA5L-213ENST00000459939 SAMD1Q6SPF0 538 aaPredicted RBP16.1■□□□□ 0.17
LCA5L-213ENST00000459939 RBM42Q9BTD8 480 aaKnown RBP15.89■□□□□ 0.13
LCA5L-213ENST00000459939 MYCNP04198 464 aaPredicted RBP15.83■□□□□ 0.12
LCA5L-213ENST00000459939 POLA2Q14181 598 aa15.79■□□□□ 0.12
LCA5L-213ENST00000459939 CHRDL2Q6WN34 429 aa15.68■□□□□ 0.1
LCA5L-213ENST00000459939 SLC4A1APQ9BWU0 796 aaKnown RBP15.47■□□□□ 0.07
LCA5L-213ENST00000459939 FOXD4L1Q9NU39 408 aa15.47■□□□□ 0.07
LCA5L-213ENST00000459939 ATF5Q9Y2D1 282 aaPredicted RBP15.47■□□□□ 0.07
LCA5L-213ENST00000459939 AKT1S1Q96B36 256 aa15.45■□□□□ 0.06
LCA5L-213ENST00000459939 ZBTB12Q9Y330 459 aaPredicted RBP15.45■□□□□ 0.06
LCA5L-213ENST00000459939 REM2Q8IYK8 340 aaPredicted RBP15.3■□□□□ 0.04
LCA5L-213ENST00000459939 OSCARQ8IYS5 282 aa15.28■□□□□ 0.04
LCA5L-213ENST00000459939 SP7Q8TDD2 431 aaPredicted RBP15.26■□□□□ 0.03
LCA5L-213ENST00000459939 PIP4P2Q8N4L2 257 aa15.22■□□□□ 0.03
LCA5L-213ENST00000459939 PITPNM1O00562 1244 aa15.13■□□□□ 0.01
LCA5L-213ENST00000459939 ZBTB22O15209 634 aa15.11■□□□□ 0.01
LCA5L-213ENST00000459939 FXR2P51116 673 aaKnown RBP eCLIP15.07■□□□□ 0
LCA5L-213ENST00000459939 HAX1O00165 279 aa15.06■□□□□ 0
LCA5L-213ENST00000459939 ATXN8OSP0DMR3 200 aa15.04■□□□□ -0
LCA5L-213ENST00000459939 SPDYE2BA6NHP3 402 aa14.94□□□□□ -0.02
LCA5L-213ENST00000459939 SPDYE6P0CI01 402 aa14.94□□□□□ -0.02
LCA5L-213ENST00000459939 SPDYE2Q495Y8 402 aa14.94□□□□□ -0.02
LCA5L-213ENST00000459939 FBLN2P98095 1184 aa14.93□□□□□ -0.02
LCA5L-213ENST00000459939 EVX2Q03828 476 aa14.81□□□□□ -0.04
LCA5L-213ENST00000459939 SPDYE1Q8NFV5 336 aaPredicted RBP14.77□□□□□ -0.05
LCA5L-213ENST00000459939 CLEC11AQ9Y240 323 aa14.76□□□□□ -0.05
LCA5L-213ENST00000459939 PRKAR2AP13861 404 aaKnown RBP14.74□□□□□ -0.05
LCA5L-213ENST00000459939 MKRN4PQ13434 485 aaPredicted RBP14.74□□□□□ -0.05
LCA5L-213ENST00000459939 ZNF692Q9BU19 519 aaPredicted RBP14.7□□□□□ -0.06
LCA5L-213ENST00000459939 DNAJC5Q9H3Z4 198 aa14.69□□□□□ -0.06
LCA5L-213ENST00000459939 SSUH2Q9Y2M2 353 aa14.68□□□□□ -0.06
LCA5L-213ENST00000459939 C19orf67A6NJJ6 358 aa14.6□□□□□ -0.07
LCA5L-213ENST00000459939 CHADLQ6NUI6 762 aa14.5□□□□□ -0.09
LCA5L-213ENST00000459939 GABBR2O75899 941 aa14.48□□□□□ -0.09
LCA5L-213ENST00000459939 PRR29P0C7W0 189 aa14.47□□□□□ -0.09
LCA5L-213ENST00000459939 PABPN1Q86U42 306 aaKnown RBP eCLIP14.47□□□□□ -0.09
LCA5L-213ENST00000459939 LHX8Q68G74 356 aa14.32□□□□□ -0.12
LCA5L-213ENST00000459939 CD44P16070 742 aaKnown RBP14.26□□□□□ -0.13
LCA5L-213ENST00000459939 FARP1Q9Y4F1 1045 aaPredicted RBP14.26□□□□□ -0.13
LCA5L-213ENST00000459939 POTEIP0CG38 1075 aa14.15□□□□□ -0.14
LCA5L-213ENST00000459939 CLCN6P51797 869 aa14.15□□□□□ -0.14
LCA5L-213ENST00000459939 CSRNP3Q8WYN3 585 aa14.11□□□□□ -0.15
LCA5L-213ENST00000459939 DCBLD2Q96PD2 775 aa14.04□□□□□ -0.16
LCA5L-213ENST00000459939 ZNF579Q8NAF0 562 aaKnown RBP14.02□□□□□ -0.17
LCA5L-213ENST00000459939 STAG3Q9UJ98 1225 aa14.02□□□□□ -0.17
LCA5L-213ENST00000459939 CREBZFQ9NS37 354 aa14.01□□□□□ -0.17
LCA5L-213ENST00000459939 ZRANB1Q9UGI0 708 aa14.01□□□□□ -0.17
LCA5L-213ENST00000459939 SPDYE4A6NLX3 237 aa13.88□□□□□ -0.19
LCA5L-213ENST00000459939 GALR2O43603 387 aaPredicted RBP13.87□□□□□ -0.19
LCA5L-213ENST00000459939 PAK3O75914 559 aaPredicted RBP13.83□□□□□ -0.2
LCA5L-213ENST00000459939 NPM1P06748 294 aaKnown RBP eCLIP13.77□□□□□ -0.21
LCA5L-213ENST00000459939 PHF12Q96QT6 1004 aa13.77□□□□□ -0.21
LCA5L-213ENST00000459939 EHMT2Q96KQ7 1210 aa13.74□□□□□ -0.21
LCA5L-213ENST00000459939 MNX1P50219 401 aaPredicted RBP13.72□□□□□ -0.21
LCA5L-213ENST00000459939 OTUD5Q96G74 571 aa13.71□□□□□ -0.21
LCA5L-213ENST00000459939 PLSCR2Q9NRY7 297 aa13.69□□□□□ -0.22
LCA5L-213ENST00000459939 POTEB2H3BUK9 544 aa13.68□□□□□ -0.22
LCA5L-213ENST00000459939 PELP1Q8IZL8 1130 aaKnown RBP13.63□□□□□ -0.23
LCA5L-213ENST00000459939 MS4A3Q96HJ5 214 aa13.57□□□□□ -0.24
LCA5L-213ENST00000459939 ASTLQ6HA08 431 aaPredicted RBP13.56□□□□□ -0.24
LCA5L-213ENST00000459939 METRNQ9UJH8 293 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms