RNA–Protein interactions for RNA: ENST00000459896.5

PGAP1-207, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 3

Gene PGAP1, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-207ENST00000459896 AEBP2Q6ZN18 517 aaPredicted RBP27.73■■■□□ 2.03
PGAP1-207ENST00000459896 CHIC1Q5VXU3 224 aa27.13■■□□□ 1.93
PGAP1-207ENST00000459896 PHF23Q9BUL5 403 aaPredicted RBP23.9■■□□□ 1.42
PGAP1-207ENST00000459896 SENP3Q9H4L4 574 aaPredicted RBP23.48■■□□□ 1.35
PGAP1-207ENST00000459896 PLPPR3Q6T4P5 718 aa22.07■■□□□ 1.12
PGAP1-207ENST00000459896 FOXD1Q16676 465 aa21.81■■□□□ 1.08
PGAP1-207ENST00000459896 PPP6R1Q9UPN7 881 aa21.08■□□□□ 0.97
PGAP1-207ENST00000459896 ADRA2BP18089 450 aa21.07■□□□□ 0.96
PGAP1-207ENST00000459896 PIAS4Q8N2W9 510 aaPredicted RBP20.6■□□□□ 0.89
PGAP1-207ENST00000459896 MSH5O43196 834 aa20.04■□□□□ 0.8
PGAP1-207ENST00000459896 PPP4R3CPQ6ZMV5 832 aa19.48■□□□□ 0.71
PGAP1-207ENST00000459896 SCAF1Q9H7N4 1312 aaKnown RBP19.21■□□□□ 0.67
PGAP1-207ENST00000459896 KCNA4P22459 653 aa19.15■□□□□ 0.66
PGAP1-207ENST00000459896 MAPK8IP2Q13387 824 aaPredicted RBP19.09■□□□□ 0.65
PGAP1-207ENST00000459896 NCBP3Q53F19 620 aaKnown RBP18.96■□□□□ 0.63
PGAP1-207ENST00000459896 CNKSR2Q8WXI2 1034 aa18.89■□□□□ 0.61
PGAP1-207ENST00000459896 DMRT2Q9Y5R5 561 aa18.76■□□□□ 0.59
PGAP1-207ENST00000459896 NPM3O75607 178 aaKnown RBP18.73■□□□□ 0.59
PGAP1-207ENST00000459896 RNF216Q9NWF9 866 aaPredicted RBP18.49■□□□□ 0.55
PGAP1-207ENST00000459896 HOXD11P31277 338 aaPredicted RBP18.39■□□□□ 0.53
PGAP1-207ENST00000459896 SLC4A1APQ9BWU0 796 aaKnown RBP18.23■□□□□ 0.51
PGAP1-207ENST00000459896 POTEDQ86YR6 584 aa18.13■□□□□ 0.49
PGAP1-207ENST00000459896 DNAJC5BQ9UF47 199 aa18.08■□□□□ 0.48
PGAP1-207ENST00000459896 DCAF8L1A6NGE4 600 aa18■□□□□ 0.47
PGAP1-207ENST00000459896 EHMT2Q96KQ7 1210 aa17.86■□□□□ 0.45
PGAP1-207ENST00000459896 SLC4A2P04920 1241 aa17.66■□□□□ 0.42
PGAP1-207ENST00000459896 ZBTB22O15209 634 aa17.64■□□□□ 0.41
PGAP1-207ENST00000459896 CSRNP3Q8WYN3 585 aa17.59■□□□□ 0.41
PGAP1-207ENST00000459896 FOXD4L1Q9NU39 408 aa17.57■□□□□ 0.4
PGAP1-207ENST00000459896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.56■□□□□ 0.4
PGAP1-207ENST00000459896 U3KPZ7 1027 aaPredicted RBP17.29■□□□□ 0.36
PGAP1-207ENST00000459896 MYCNP04198 464 aaPredicted RBP17.28■□□□□ 0.36
PGAP1-207ENST00000459896 RNF39Q9H2S5 420 aa17.2■□□□□ 0.34
PGAP1-207ENST00000459896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.05■□□□□ 0.32
PGAP1-207ENST00000459896 HNRNPUL2Q1KMD3 747 aaKnown RBP17.05■□□□□ 0.32
PGAP1-207ENST00000459896 SAMD1Q6SPF0 538 aaPredicted RBP17.01■□□□□ 0.31
PGAP1-207ENST00000459896 C1QBPQ07021 282 aaKnown RBP16.98■□□□□ 0.31
PGAP1-207ENST00000459896 ATXN8OSP0DMR3 200 aa16.92■□□□□ 0.3
PGAP1-207ENST00000459896 ATF5Q9Y2D1 282 aaPredicted RBP16.86■□□□□ 0.29
PGAP1-207ENST00000459896 APLP2Q06481 763 aa16.84■□□□□ 0.29
PGAP1-207ENST00000459896 SPINK5Q9NQ38 1064 aaPredicted RBP16.81■□□□□ 0.28
PGAP1-207ENST00000459896 CAPN15O75808 1086 aa16.72■□□□□ 0.27
PGAP1-207ENST00000459896 CACNB1Q02641 598 aaPredicted RBP16.7■□□□□ 0.26
PGAP1-207ENST00000459896 TRHP20396 242 aaPredicted RBP16.67■□□□□ 0.26
PGAP1-207ENST00000459896 ZNF219Q9P2Y4 722 aaPredicted RBP16.62■□□□□ 0.25
PGAP1-207ENST00000459896 ABCB7O75027 752 aa16.43■□□□□ 0.22
PGAP1-207ENST00000459896 POLA2Q14181 598 aa16.41■□□□□ 0.22
PGAP1-207ENST00000459896 DSG3P32926 999 aa16.4■□□□□ 0.22
PGAP1-207ENST00000459896 MKRN4PQ13434 485 aaPredicted RBP16.11■□□□□ 0.17
PGAP1-207ENST00000459896 FBLN2P98095 1184 aa16.1■□□□□ 0.17
PGAP1-207ENST00000459896 ZBTB12Q9Y330 459 aaPredicted RBP16.1■□□□□ 0.17
PGAP1-207ENST00000459896 FKBP8Q14318 412 aa15.91■□□□□ 0.14
PGAP1-207ENST00000459896 OSCARQ8IYS5 282 aa15.86■□□□□ 0.13
PGAP1-207ENST00000459896 SPDYE4A6NLX3 237 aa15.79■□□□□ 0.12
PGAP1-207ENST00000459896 SPDYE2BA6NHP3 402 aa15.68■□□□□ 0.1
PGAP1-207ENST00000459896 SPDYE6P0CI01 402 aa15.68■□□□□ 0.1
PGAP1-207ENST00000459896 SPDYE2Q495Y8 402 aa15.68■□□□□ 0.1
PGAP1-207ENST00000459896 ZNF692Q9BU19 519 aaPredicted RBP15.66■□□□□ 0.1
PGAP1-207ENST00000459896 RBM42Q9BTD8 480 aaKnown RBP15.6■□□□□ 0.09
PGAP1-207ENST00000459896 SSUH2Q9Y2M2 353 aa15.58■□□□□ 0.08
PGAP1-207ENST00000459896 PROM2Q8N271 834 aa15.5■□□□□ 0.07
PGAP1-207ENST00000459896 PABPN1Q86U42 306 aaKnown RBP eCLIP15.47■□□□□ 0.07
PGAP1-207ENST00000459896 AKT1S1Q96B36 256 aa15.43■□□□□ 0.06
PGAP1-207ENST00000459896 REM2Q8IYK8 340 aaPredicted RBP15.31■□□□□ 0.04
PGAP1-207ENST00000459896 FBXO3Q9UK99 471 aa15.27■□□□□ 0.04
PGAP1-207ENST00000459896 SPDYE1Q8NFV5 336 aaPredicted RBP15.21■□□□□ 0.03
PGAP1-207ENST00000459896 STAG3Q9UJ98 1225 aa15.18■□□□□ 0.02
PGAP1-207ENST00000459896 CLEC11AQ9Y240 323 aa15.18■□□□□ 0.02
PGAP1-207ENST00000459896 PITPNM1O00562 1244 aa15.15■□□□□ 0.02
PGAP1-207ENST00000459896 VASPP50552 380 aaPredicted RBP15.09■□□□□ 0.01
PGAP1-207ENST00000459896 PRR29P0C7W0 189 aa15.03■□□□□ -0
PGAP1-207ENST00000459896 MIER1Q8N108 512 aa14.96□□□□□ -0.01
PGAP1-207ENST00000459896 CHRDL2Q6WN34 429 aa14.95□□□□□ -0.02
PGAP1-207ENST00000459896 PLCD3Q8N3E9 789 aa14.95□□□□□ -0.02
PGAP1-207ENST00000459896 IFNLR1Q8IU57 520 aaPredicted RBP14.9□□□□□ -0.02
PGAP1-207ENST00000459896 CREBZFQ9NS37 354 aa14.86□□□□□ -0.03
PGAP1-207ENST00000459896 PLEKHG5O94827 1062 aa14.85□□□□□ -0.03
PGAP1-207ENST00000459896 FXR2P51116 673 aaKnown RBP eCLIP14.82□□□□□ -0.04
PGAP1-207ENST00000459896 KLHL34Q8N239 644 aa14.82□□□□□ -0.04
PGAP1-207ENST00000459896 CHADLQ6NUI6 762 aa14.8□□□□□ -0.04
PGAP1-207ENST00000459896 PIP4P2Q8N4L2 257 aa14.78□□□□□ -0.04
PGAP1-207ENST00000459896 PRKAR2AP13861 404 aaKnown RBP14.76□□□□□ -0.05
PGAP1-207ENST00000459896 ZBTB47Q9UFB7 747 aaPredicted RBP14.74□□□□□ -0.05
PGAP1-207ENST00000459896 MNX1P50219 401 aaPredicted RBP14.71□□□□□ -0.05
PGAP1-207ENST00000459896 SPOCK2Q92563 424 aa14.69□□□□□ -0.06
PGAP1-207ENST00000459896 FARP1Q9Y4F1 1045 aaPredicted RBP14.64□□□□□ -0.07
PGAP1-207ENST00000459896 RTN4Q9NQC3 1192 aaKnown RBP14.62□□□□□ -0.07
PGAP1-207ENST00000459896 AMER1Q5JTC6 1135 aaPredicted RBP14.61□□□□□ -0.07
PGAP1-207ENST00000459896 NPM1P06748 294 aaKnown RBP eCLIP14.59□□□□□ -0.07
PGAP1-207ENST00000459896 NUBP1P53384 320 aa14.56□□□□□ -0.08
PGAP1-207ENST00000459896 RASEFQ8IZ41 740 aa14.5□□□□□ -0.09
PGAP1-207ENST00000459896 CIZ1Q9ULV3 898 aaPredicted RBP14.47□□□□□ -0.09
PGAP1-207ENST00000459896 DCAF8Q5TAQ9 597 aa14.44□□□□□ -0.1
PGAP1-207ENST00000459896 FAM212AQ96EL1 285 aa14.44□□□□□ -0.1
PGAP1-207ENST00000459896 PKD2Q13563 968 aa14.43□□□□□ -0.1
PGAP1-207ENST00000459896 TSPYL2Q9H2G4 693 aaPredicted RBP14.41□□□□□ -0.1
PGAP1-207ENST00000459896 GSE1Q14687 1217 aa14.4□□□□□ -0.1
PGAP1-207ENST00000459896 POTEHQ6S545 545 aa14.37□□□□□ -0.11
PGAP1-207ENST00000459896 CD44P16070 742 aaKnown RBP14.35□□□□□ -0.11
PGAP1-207ENST00000459896 PAK3O75914 559 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms