RNA–Protein interactions for RNA: ENST00000455957.5

HCG17-215, Transcript of HLA complex group 17, humanhuman

TSL 3

Gene HCG17, Length 350 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG17-215ENST00000455957 AEBP2Q6ZN18 517 aaPredicted RBP26.47■■□□□ 1.83
HCG17-215ENST00000455957 CHIC1Q5VXU3 224 aa25.15■■□□□ 1.62
HCG17-215ENST00000455957 SENP3Q9H4L4 574 aaPredicted RBP22.74■■□□□ 1.23
HCG17-215ENST00000455957 PHF23Q9BUL5 403 aaPredicted RBP22.36■■□□□ 1.17
HCG17-215ENST00000455957 FOXD1Q16676 465 aa21.11■□□□□ 0.97
HCG17-215ENST00000455957 PLPPR3Q6T4P5 718 aa20.13■□□□□ 0.81
HCG17-215ENST00000455957 MSH5O43196 834 aa19.89■□□□□ 0.77
HCG17-215ENST00000455957 PIAS4Q8N2W9 510 aaPredicted RBP19.81■□□□□ 0.76
HCG17-215ENST00000455957 PPP6R1Q9UPN7 881 aa19.63■□□□□ 0.73
HCG17-215ENST00000455957 ADRA2BP18089 450 aa19.62■□□□□ 0.73
HCG17-215ENST00000455957 POTEDQ86YR6 584 aa19.43■□□□□ 0.7
HCG17-215ENST00000455957 SCAF1Q9H7N4 1312 aaKnown RBP18.09■□□□□ 0.49
HCG17-215ENST00000455957 MAPK8IP2Q13387 824 aaPredicted RBP18■□□□□ 0.47
HCG17-215ENST00000455957 DMRT2Q9Y5R5 561 aa17.97■□□□□ 0.47
HCG17-215ENST00000455957 PPP4R3CPQ6ZMV5 832 aa17.6■□□□□ 0.41
HCG17-215ENST00000455957 DCAF8L1A6NGE4 600 aa17.36■□□□□ 0.37
HCG17-215ENST00000455957 CNKSR2Q8WXI2 1034 aa17.31■□□□□ 0.36
HCG17-215ENST00000455957 HOXD11P31277 338 aaPredicted RBP17.26■□□□□ 0.35
HCG17-215ENST00000455957 RNF216Q9NWF9 866 aaPredicted RBP17.16■□□□□ 0.34
HCG17-215ENST00000455957 CACNB1Q02641 598 aaPredicted RBP17.11■□□□□ 0.33
HCG17-215ENST00000455957 NCBP3Q53F19 620 aaKnown RBP17■□□□□ 0.31
HCG17-215ENST00000455957 RNF39Q9H2S5 420 aa16.89■□□□□ 0.29
HCG17-215ENST00000455957 C1QBPQ07021 282 aaKnown RBP16.68■□□□□ 0.26
HCG17-215ENST00000455957 DNAJC5BQ9UF47 199 aa16.68■□□□□ 0.26
HCG17-215ENST00000455957 NPM3O75607 178 aaKnown RBP16.65■□□□□ 0.26
HCG17-215ENST00000455957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.55■□□□□ 0.24
HCG17-215ENST00000455957 KCNA4P22459 653 aa16.27■□□□□ 0.2
HCG17-215ENST00000455957 U3KPZ7 1027 aaPredicted RBP16.11■□□□□ 0.17
HCG17-215ENST00000455957 CAPN15O75808 1086 aa15.97■□□□□ 0.15
HCG17-215ENST00000455957 SPINK5Q9NQ38 1064 aaPredicted RBP15.89■□□□□ 0.13
HCG17-215ENST00000455957 SLC4A2P04920 1241 aa15.86■□□□□ 0.13
HCG17-215ENST00000455957 APLP2Q06481 763 aa15.83■□□□□ 0.12
HCG17-215ENST00000455957 DSG3P32926 999 aa15.79■□□□□ 0.12
HCG17-215ENST00000455957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.75■□□□□ 0.11
HCG17-215ENST00000455957 HNRNPUL2Q1KMD3 747 aaKnown RBP15.75■□□□□ 0.11
HCG17-215ENST00000455957 TRHP20396 242 aaPredicted RBP15.68■□□□□ 0.1
HCG17-215ENST00000455957 ZNF219Q9P2Y4 722 aaPredicted RBP15.68■□□□□ 0.1
HCG17-215ENST00000455957 SAMD1Q6SPF0 538 aaPredicted RBP15.63■□□□□ 0.09
HCG17-215ENST00000455957 ABCB7O75027 752 aa15.55■□□□□ 0.08
HCG17-215ENST00000455957 MYCNP04198 464 aaPredicted RBP15.47■□□□□ 0.07
HCG17-215ENST00000455957 SLC4A1APQ9BWU0 796 aaKnown RBP15.41■□□□□ 0.06
HCG17-215ENST00000455957 POTEHQ6S545 545 aa15.25■□□□□ 0.03
HCG17-215ENST00000455957 FOXD4L1Q9NU39 408 aa15.25■□□□□ 0.03
HCG17-215ENST00000455957 POLA2Q14181 598 aa15.2■□□□□ 0.02
HCG17-215ENST00000455957 RBM42Q9BTD8 480 aaKnown RBP15.19■□□□□ 0.02
HCG17-215ENST00000455957 ATF5Q9Y2D1 282 aaPredicted RBP14.99□□□□□ -0.01
HCG17-215ENST00000455957 ZBTB12Q9Y330 459 aaPredicted RBP14.99□□□□□ -0.01
HCG17-215ENST00000455957 ZBTB22O15209 634 aa14.89□□□□□ -0.03
HCG17-215ENST00000455957 CHRDL2Q6WN34 429 aa14.82□□□□□ -0.04
HCG17-215ENST00000455957 ATXN8OSP0DMR3 200 aa14.78□□□□□ -0.04
HCG17-215ENST00000455957 AKT1S1Q96B36 256 aa14.76□□□□□ -0.05
HCG17-215ENST00000455957 OSCARQ8IYS5 282 aa14.74□□□□□ -0.05
HCG17-215ENST00000455957 REM2Q8IYK8 340 aaPredicted RBP14.6□□□□□ -0.07
HCG17-215ENST00000455957 FBLN2P98095 1184 aa14.59□□□□□ -0.07
HCG17-215ENST00000455957 SPDYE2BA6NHP3 402 aa14.46□□□□□ -0.09
HCG17-215ENST00000455957 SPDYE6P0CI01 402 aa14.46□□□□□ -0.09
HCG17-215ENST00000455957 SPDYE2Q495Y8 402 aa14.46□□□□□ -0.09
HCG17-215ENST00000455957 PITPNM1O00562 1244 aa14.45□□□□□ -0.1
HCG17-215ENST00000455957 PIP4P2Q8N4L2 257 aa14.42□□□□□ -0.1
HCG17-215ENST00000455957 MKRN4PQ13434 485 aaPredicted RBP14.31□□□□□ -0.12
HCG17-215ENST00000455957 FXR2P51116 673 aaKnown RBP eCLIP14.3□□□□□ -0.12
HCG17-215ENST00000455957 SP7Q8TDD2 431 aaPredicted RBP14.28□□□□□ -0.12
HCG17-215ENST00000455957 ZNF692Q9BU19 519 aaPredicted RBP14.28□□□□□ -0.12
HCG17-215ENST00000455957 SPDYE1Q8NFV5 336 aaPredicted RBP14.25□□□□□ -0.13
HCG17-215ENST00000455957 HAX1O00165 279 aa14.24□□□□□ -0.13
HCG17-215ENST00000455957 CLEC11AQ9Y240 323 aa14.24□□□□□ -0.13
HCG17-215ENST00000455957 SSUH2Q9Y2M2 353 aa14.2□□□□□ -0.14
HCG17-215ENST00000455957 CSRNP3Q8WYN3 585 aa14.17□□□□□ -0.14
HCG17-215ENST00000455957 PRKAR2AP13861 404 aaKnown RBP14.11□□□□□ -0.15
HCG17-215ENST00000455957 EHMT2Q96KQ7 1210 aa14.07□□□□□ -0.16
HCG17-215ENST00000455957 PABPN1Q86U42 306 aaKnown RBP eCLIP14.06□□□□□ -0.16
HCG17-215ENST00000455957 PRR29P0C7W0 189 aa13.98□□□□□ -0.17
HCG17-215ENST00000455957 EVX2Q03828 476 aa13.91□□□□□ -0.18
HCG17-215ENST00000455957 CHADLQ6NUI6 762 aa13.9□□□□□ -0.18
HCG17-215ENST00000455957 C19orf67A6NJJ6 358 aa13.85□□□□□ -0.19
HCG17-215ENST00000455957 SPDYE4A6NLX3 237 aa13.7□□□□□ -0.22
HCG17-215ENST00000455957 STAG3Q9UJ98 1225 aa13.7□□□□□ -0.22
HCG17-215ENST00000455957 FARP1Q9Y4F1 1045 aaPredicted RBP13.7□□□□□ -0.22
HCG17-215ENST00000455957 CD44P16070 742 aaKnown RBP13.68□□□□□ -0.22
HCG17-215ENST00000455957 GABBR2O75899 941 aa13.67□□□□□ -0.22
HCG17-215ENST00000455957 CREBZFQ9NS37 354 aa13.53□□□□□ -0.24
HCG17-215ENST00000455957 CLCN6P51797 869 aa13.51□□□□□ -0.25
HCG17-215ENST00000455957 ZRANB1Q9UGI0 708 aa13.47□□□□□ -0.25
HCG17-215ENST00000455957 PAK3O75914 559 aaPredicted RBP13.44□□□□□ -0.26
HCG17-215ENST00000455957 ZNF579Q8NAF0 562 aaKnown RBP13.43□□□□□ -0.26
HCG17-215ENST00000455957 NPM1P06748 294 aaKnown RBP eCLIP13.4□□□□□ -0.26
HCG17-215ENST00000455957 DCBLD2Q96PD2 775 aa13.39□□□□□ -0.27
HCG17-215ENST00000455957 LHX8Q68G74 356 aa13.38□□□□□ -0.27
HCG17-215ENST00000455957 POTEIP0CG38 1075 aa13.31□□□□□ -0.28
HCG17-215ENST00000455957 PROM2Q8N271 834 aa13.26□□□□□ -0.29
HCG17-215ENST00000455957 GALR2O43603 387 aaPredicted RBP13.25□□□□□ -0.29
HCG17-215ENST00000455957 MNX1P50219 401 aaPredicted RBP13.24□□□□□ -0.29
HCG17-215ENST00000455957 PHF12Q96QT6 1004 aa13.24□□□□□ -0.29
HCG17-215ENST00000455957 PLEKHG5O94827 1062 aa13.21□□□□□ -0.29
HCG17-215ENST00000455957 TSPYL2Q9H2G4 693 aaPredicted RBP13.12□□□□□ -0.31
HCG17-215ENST00000455957 MIER1Q8N108 512 aa13.1□□□□□ -0.31
HCG17-215ENST00000455957 MS4A3Q96HJ5 214 aa13.07□□□□□ -0.32
HCG17-215ENST00000455957 PLCD3Q8N3E9 789 aa13.03□□□□□ -0.32
HCG17-215ENST00000455957 CCDC61Q9Y6R9 512 aa13□□□□□ -0.33
HCG17-215ENST00000455957 ZBTB47Q9UFB7 747 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms