RNA–Protein interactions for RNA: ENST00000455415.1

COL19A1-201, Transcript of collagen type XIX alpha 1 chain, humanhuman

TSL 3

Gene COL19A1, Length 256 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1-201ENST00000455415 CHIC1Q5VXU3 224 aa16.73■□□□□ 0.27
COL19A1-201ENST00000455415 AEBP2Q6ZN18 517 aaPredicted RBP16.65■□□□□ 0.26
COL19A1-201ENST00000455415 PHF23Q9BUL5 403 aaPredicted RBP14.68□□□□□ -0.06
COL19A1-201ENST00000455415 SENP3Q9H4L4 574 aaPredicted RBP14.18□□□□□ -0.14
COL19A1-201ENST00000455415 PLPPR3Q6T4P5 718 aa13.79□□□□□ -0.2
COL19A1-201ENST00000455415 FOXD1Q16676 465 aa13.02□□□□□ -0.33
COL19A1-201ENST00000455415 ADRA2BP18089 450 aa12.81□□□□□ -0.36
COL19A1-201ENST00000455415 PPP6R1Q9UPN7 881 aa12.79□□□□□ -0.36
COL19A1-201ENST00000455415 PIAS4Q8N2W9 510 aaPredicted RBP12.4□□□□□ -0.42
COL19A1-201ENST00000455415 KCNA4P22459 653 aa12.28□□□□□ -0.44
COL19A1-201ENST00000455415 PPP4R3CPQ6ZMV5 832 aa12.15□□□□□ -0.46
COL19A1-201ENST00000455415 NCBP3Q53F19 620 aaKnown RBP12.03□□□□□ -0.48
COL19A1-201ENST00000455415 MSH5O43196 834 aa11.96□□□□□ -0.49
COL19A1-201ENST00000455415 SCAF1Q9H7N4 1312 aaKnown RBP11.86□□□□□ -0.51
COL19A1-201ENST00000455415 EHMT2Q96KQ7 1210 aa11.84□□□□□ -0.51
COL19A1-201ENST00000455415 SLC4A1APQ9BWU0 796 aaKnown RBP11.81□□□□□ -0.52
COL19A1-201ENST00000455415 CNKSR2Q8WXI2 1034 aa11.77□□□□□ -0.53
COL19A1-201ENST00000455415 NPM3O75607 178 aaKnown RBP11.76□□□□□ -0.53
COL19A1-201ENST00000455415 POTEDQ86YR6 584 aa11.73□□□□□ -0.53
COL19A1-201ENST00000455415 CSRNP3Q8WYN3 585 aa11.56□□□□□ -0.56
COL19A1-201ENST00000455415 DNAJC5BQ9UF47 199 aa11.52□□□□□ -0.57
COL19A1-201ENST00000455415 MAPK8IP2Q13387 824 aaPredicted RBP11.47□□□□□ -0.57
COL19A1-201ENST00000455415 RNF216Q9NWF9 866 aaPredicted RBP11.45□□□□□ -0.58
COL19A1-201ENST00000455415 DMRT2Q9Y5R5 561 aa11.37□□□□□ -0.59
COL19A1-201ENST00000455415 HOXD11P31277 338 aaPredicted RBP11.29□□□□□ -0.6
COL19A1-201ENST00000455415 ZBTB22O15209 634 aa11.28□□□□□ -0.6
COL19A1-201ENST00000455415 FOXD4L1Q9NU39 408 aa11.26□□□□□ -0.61
COL19A1-201ENST00000455415 SLC4A2P04920 1241 aa10.99□□□□□ -0.65
COL19A1-201ENST00000455415 MYCNP04198 464 aaPredicted RBP10.93□□□□□ -0.66
COL19A1-201ENST00000455415 ATXN8OSP0DMR3 200 aa10.9□□□□□ -0.66
COL19A1-201ENST00000455415 DCAF8L1A6NGE4 600 aa10.76□□□□□ -0.69
COL19A1-201ENST00000455415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.73□□□□□ -0.69
COL19A1-201ENST00000455415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.7□□□□□ -0.7
COL19A1-201ENST00000455415 HNRNPUL2Q1KMD3 747 aaKnown RBP10.7□□□□□ -0.7
COL19A1-201ENST00000455415 SAMD1Q6SPF0 538 aaPredicted RBP10.66□□□□□ -0.7
COL19A1-201ENST00000455415 U3KPZ7 1027 aaPredicted RBP10.58□□□□□ -0.72
COL19A1-201ENST00000455415 APLP2Q06481 763 aa10.53□□□□□ -0.72
COL19A1-201ENST00000455415 ATF5Q9Y2D1 282 aaPredicted RBP10.47□□□□□ -0.73
COL19A1-201ENST00000455415 FKBP8Q14318 412 aa10.43□□□□□ -0.74
COL19A1-201ENST00000455415 ZNF219Q9P2Y4 722 aaPredicted RBP10.35□□□□□ -0.75
COL19A1-201ENST00000455415 AMER1Q5JTC6 1135 aaPredicted RBP10.29□□□□□ -0.76
COL19A1-201ENST00000455415 RNF39Q9H2S5 420 aa10.24□□□□□ -0.77
COL19A1-201ENST00000455415 C1QBPQ07021 282 aaKnown RBP10.19□□□□□ -0.78
COL19A1-201ENST00000455415 RTN4Q9NQC3 1192 aaKnown RBP10.16□□□□□ -0.78
COL19A1-201ENST00000455415 FBLN2P98095 1184 aa10.14□□□□□ -0.79
COL19A1-201ENST00000455415 TRHP20396 242 aaPredicted RBP10.12□□□□□ -0.79
COL19A1-201ENST00000455415 SPINK5Q9NQ38 1064 aaPredicted RBP10.12□□□□□ -0.79
COL19A1-201ENST00000455415 CAPN15O75808 1086 aa10.1□□□□□ -0.79
COL19A1-201ENST00000455415 SPDYE4A6NLX3 237 aa10.08□□□□□ -0.8
COL19A1-201ENST00000455415 MKRN4PQ13434 485 aaPredicted RBP10.08□□□□□ -0.8
COL19A1-201ENST00000455415 ZBTB12Q9Y330 459 aaPredicted RBP10.08□□□□□ -0.8
COL19A1-201ENST00000455415 POLA2Q14181 598 aa10.07□□□□□ -0.8
COL19A1-201ENST00000455415 FBXO3Q9UK99 471 aa10.06□□□□□ -0.8
COL19A1-201ENST00000455415 CACNB1Q02641 598 aaPredicted RBP10.04□□□□□ -0.8
COL19A1-201ENST00000455415 PROM2Q8N271 834 aa10.03□□□□□ -0.8
COL19A1-201ENST00000455415 ABCB7O75027 752 aa9.89□□□□□ -0.83
COL19A1-201ENST00000455415 SLC24A1O60721 1099 aa9.88□□□□□ -0.83
COL19A1-201ENST00000455415 DSG3P32926 999 aa9.86□□□□□ -0.83
COL19A1-201ENST00000455415 VASPP50552 380 aaPredicted RBP9.86□□□□□ -0.83
COL19A1-201ENST00000455415 SPDYE2BA6NHP3 402 aa9.79□□□□□ -0.84
COL19A1-201ENST00000455415 SPDYE6P0CI01 402 aa9.79□□□□□ -0.84
COL19A1-201ENST00000455415 SPDYE2Q495Y8 402 aa9.79□□□□□ -0.84
COL19A1-201ENST00000455415 ZNF692Q9BU19 519 aaPredicted RBP9.74□□□□□ -0.85
COL19A1-201ENST00000455415 SSUH2Q9Y2M2 353 aa9.74□□□□□ -0.85
COL19A1-201ENST00000455415 OSCARQ8IYS5 282 aa9.71□□□□□ -0.86
COL19A1-201ENST00000455415 STAG3Q9UJ98 1225 aa9.71□□□□□ -0.86
COL19A1-201ENST00000455415 IFNLR1Q8IU57 520 aaPredicted RBP9.7□□□□□ -0.86
COL19A1-201ENST00000455415 PABPN1Q86U42 306 aaKnown RBP eCLIP9.62□□□□□ -0.87
COL19A1-201ENST00000455415 SPOCK2Q92563 424 aa9.58□□□□□ -0.88
COL19A1-201ENST00000455415 KLHL34Q8N239 644 aa9.56□□□□□ -0.88
COL19A1-201ENST00000455415 PLCD3Q8N3E9 789 aa9.55□□□□□ -0.88
COL19A1-201ENST00000455415 PKD2Q13563 968 aa9.53□□□□□ -0.88
COL19A1-201ENST00000455415 PLEKHG5O94827 1062 aa9.52□□□□□ -0.89
COL19A1-201ENST00000455415 ZBTB47Q9UFB7 747 aaPredicted RBP9.52□□□□□ -0.89
COL19A1-201ENST00000455415 MIER1Q8N108 512 aa9.49□□□□□ -0.89
COL19A1-201ENST00000455415 RBM42Q9BTD8 480 aaKnown RBP9.48□□□□□ -0.89
COL19A1-201ENST00000455415 PLCB2Q00722 1185 aa9.46□□□□□ -0.9
COL19A1-201ENST00000455415 DCAF8L2P0C7V8 631 aa9.44□□□□□ -0.9
COL19A1-201ENST00000455415 ECM2O94769 699 aaPredicted RBP9.42□□□□□ -0.9
COL19A1-201ENST00000455415 AKT1S1Q96B36 256 aa9.42□□□□□ -0.9
COL19A1-201ENST00000455415 SPDYE1Q8NFV5 336 aaPredicted RBP9.4□□□□□ -0.9
COL19A1-201ENST00000455415 TRIM41Q8WV44 630 aa9.39□□□□□ -0.91
COL19A1-201ENST00000455415 BBXQ8WY36 941 aaPredicted RBP9.33□□□□□ -0.92
COL19A1-201ENST00000455415 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.32□□□□□ -0.92
COL19A1-201ENST00000455415 CIZ1Q9ULV3 898 aaPredicted RBP9.31□□□□□ -0.92
COL19A1-201ENST00000455415 GSE1Q14687 1217 aa9.3□□□□□ -0.92
COL19A1-201ENST00000455415 RGL2O15211 777 aa9.29□□□□□ -0.92
COL19A1-201ENST00000455415 PRR29P0C7W0 189 aa9.26□□□□□ -0.93
COL19A1-201ENST00000455415 HAP1P54257 671 aaPredicted RBP9.26□□□□□ -0.93
COL19A1-201ENST00000455415 REM2Q8IYK8 340 aaPredicted RBP9.26□□□□□ -0.93
COL19A1-201ENST00000455415 CLEC11AQ9Y240 323 aa9.24□□□□□ -0.93
COL19A1-201ENST00000455415 NUBP1P53384 320 aa9.23□□□□□ -0.93
COL19A1-201ENST00000455415 VSIG10Q8N0Z9 540 aa9.22□□□□□ -0.93
COL19A1-201ENST00000455415 CREBZFQ9NS37 354 aa9.22□□□□□ -0.93
COL19A1-201ENST00000455415 NPM1P06748 294 aaKnown RBP eCLIP9.21□□□□□ -0.94
COL19A1-201ENST00000455415 TAOK2Q9UL54 1235 aa9.21□□□□□ -0.94
COL19A1-201ENST00000455415 FAM212AQ96EL1 285 aa9.19□□□□□ -0.94
COL19A1-201ENST00000455415 MNX1P50219 401 aaPredicted RBP9.17□□□□□ -0.94
COL19A1-201ENST00000455415 HS6ST3Q8IZP7 471 aa9.17□□□□□ -0.94
COL19A1-201ENST00000455415 CHGAP10645 457 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms