RNA–Protein interactions for RNA: ENST00000454172.5

LINC01611-202, Transcript of long intergenic non-protein coding RNA 1611, humanhuman

TSL 3

Gene LINC01611, Length 411 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01611-202ENST00000454172 AEBP2Q6ZN18 517 aaPredicted RBP30.35■■■□□ 2.45
LINC01611-202ENST00000454172 CHIC1Q5VXU3 224 aa28.74■■■□□ 2.19
LINC01611-202ENST00000454172 SENP3Q9H4L4 574 aaPredicted RBP25.9■■□□□ 1.74
LINC01611-202ENST00000454172 PHF23Q9BUL5 403 aaPredicted RBP25.55■■□□□ 1.68
LINC01611-202ENST00000454172 FOXD1Q16676 465 aa24.15■■□□□ 1.46
LINC01611-202ENST00000454172 PLPPR3Q6T4P5 718 aa22.92■■□□□ 1.26
LINC01611-202ENST00000454172 MSH5O43196 834 aa22.63■■□□□ 1.21
LINC01611-202ENST00000454172 PIAS4Q8N2W9 510 aaPredicted RBP22.56■■□□□ 1.2
LINC01611-202ENST00000454172 PPP6R1Q9UPN7 881 aa22.52■■□□□ 1.2
LINC01611-202ENST00000454172 ADRA2BP18089 450 aa22.45■■□□□ 1.18
LINC01611-202ENST00000454172 POTEDQ86YR6 584 aa22.23■■□□□ 1.15
LINC01611-202ENST00000454172 MAPK8IP2Q13387 824 aaPredicted RBP20.64■□□□□ 0.89
LINC01611-202ENST00000454172 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
LINC01611-202ENST00000454172 DMRT2Q9Y5R5 561 aa20.52■□□□□ 0.88
LINC01611-202ENST00000454172 PPP4R3CPQ6ZMV5 832 aa20.09■□□□□ 0.81
LINC01611-202ENST00000454172 HOXD11P31277 338 aaPredicted RBP19.74■□□□□ 0.75
LINC01611-202ENST00000454172 CNKSR2Q8WXI2 1034 aa19.72■□□□□ 0.75
LINC01611-202ENST00000454172 DCAF8L1A6NGE4 600 aa19.69■□□□□ 0.74
LINC01611-202ENST00000454172 RNF216Q9NWF9 866 aaPredicted RBP19.56■□□□□ 0.72
LINC01611-202ENST00000454172 CACNB1Q02641 598 aaPredicted RBP19.47■□□□□ 0.71
LINC01611-202ENST00000454172 RNF39Q9H2S5 420 aa19.31■□□□□ 0.68
LINC01611-202ENST00000454172 NCBP3Q53F19 620 aaKnown RBP19.28■□□□□ 0.68
LINC01611-202ENST00000454172 DNAJC5BQ9UF47 199 aa19.06■□□□□ 0.64
LINC01611-202ENST00000454172 C1QBPQ07021 282 aaKnown RBP19.02■□□□□ 0.64
LINC01611-202ENST00000454172 NPM3O75607 178 aaKnown RBP19.01■□□□□ 0.63
LINC01611-202ENST00000454172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.81■□□□□ 0.6
LINC01611-202ENST00000454172 KCNA4P22459 653 aa18.58■□□□□ 0.56
LINC01611-202ENST00000454172 U3KPZ7 1027 aaPredicted RBP18.41■□□□□ 0.54
LINC01611-202ENST00000454172 SLC4A2P04920 1241 aa18.18■□□□□ 0.5
LINC01611-202ENST00000454172 SPINK5Q9NQ38 1064 aaPredicted RBP18.17■□□□□ 0.5
LINC01611-202ENST00000454172 CAPN15O75808 1086 aa18.14■□□□□ 0.49
LINC01611-202ENST00000454172 DSG3P32926 999 aa18.05■□□□□ 0.48
LINC01611-202ENST00000454172 APLP2Q06481 763 aa17.87■□□□□ 0.45
LINC01611-202ENST00000454172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.84■□□□□ 0.45
LINC01611-202ENST00000454172 HNRNPUL2Q1KMD3 747 aaKnown RBP17.84■□□□□ 0.45
LINC01611-202ENST00000454172 TRHP20396 242 aaPredicted RBP17.83■□□□□ 0.44
LINC01611-202ENST00000454172 ZNF219Q9P2Y4 722 aaPredicted RBP17.79■□□□□ 0.44
LINC01611-202ENST00000454172 SAMD1Q6SPF0 538 aaPredicted RBP17.75■□□□□ 0.43
LINC01611-202ENST00000454172 ABCB7O75027 752 aa17.72■□□□□ 0.43
LINC01611-202ENST00000454172 MYCNP04198 464 aaPredicted RBP17.59■□□□□ 0.41
LINC01611-202ENST00000454172 SLC4A1APQ9BWU0 796 aaKnown RBP17.52■□□□□ 0.4
LINC01611-202ENST00000454172 POTEHQ6S545 545 aa17.41■□□□□ 0.38
LINC01611-202ENST00000454172 FOXD4L1Q9NU39 408 aa17.36■□□□□ 0.37
LINC01611-202ENST00000454172 POLA2Q14181 598 aa17.33■□□□□ 0.36
LINC01611-202ENST00000454172 RBM42Q9BTD8 480 aaKnown RBP17.22■□□□□ 0.35
LINC01611-202ENST00000454172 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
LINC01611-202ENST00000454172 ZBTB22O15209 634 aa17.09■□□□□ 0.33
LINC01611-202ENST00000454172 ZBTB12Q9Y330 459 aaPredicted RBP16.96■□□□□ 0.31
LINC01611-202ENST00000454172 CHRDL2Q6WN34 429 aa16.89■□□□□ 0.29
LINC01611-202ENST00000454172 ATXN8OSP0DMR3 200 aa16.82■□□□□ 0.28
LINC01611-202ENST00000454172 AKT1S1Q96B36 256 aa16.81■□□□□ 0.28
LINC01611-202ENST00000454172 OSCARQ8IYS5 282 aa16.79■□□□□ 0.28
LINC01611-202ENST00000454172 REM2Q8IYK8 340 aaPredicted RBP16.65■□□□□ 0.26
LINC01611-202ENST00000454172 FBLN2P98095 1184 aa16.52■□□□□ 0.24
LINC01611-202ENST00000454172 PITPNM1O00562 1244 aa16.48■□□□□ 0.23
LINC01611-202ENST00000454172 PIP4P2Q8N4L2 257 aa16.46■□□□□ 0.23
LINC01611-202ENST00000454172 SPDYE2BA6NHP3 402 aa16.44■□□□□ 0.22
LINC01611-202ENST00000454172 SPDYE6P0CI01 402 aa16.44■□□□□ 0.22
LINC01611-202ENST00000454172 SPDYE2Q495Y8 402 aa16.44■□□□□ 0.22
LINC01611-202ENST00000454172 MKRN4PQ13434 485 aaPredicted RBP16.4■□□□□ 0.22
LINC01611-202ENST00000454172 FXR2P51116 673 aaKnown RBP eCLIP16.35■□□□□ 0.21
LINC01611-202ENST00000454172 SP7Q8TDD2 431 aaPredicted RBP16.28■□□□□ 0.2
LINC01611-202ENST00000454172 ZNF692Q9BU19 519 aaPredicted RBP16.22■□□□□ 0.19
LINC01611-202ENST00000454172 CSRNP3Q8WYN3 585 aa16.21■□□□□ 0.19
LINC01611-202ENST00000454172 SSUH2Q9Y2M2 353 aa16.21■□□□□ 0.19
LINC01611-202ENST00000454172 HAX1O00165 279 aa16.19■□□□□ 0.18
LINC01611-202ENST00000454172 SPDYE1Q8NFV5 336 aaPredicted RBP16.18■□□□□ 0.18
LINC01611-202ENST00000454172 CLEC11AQ9Y240 323 aa16.16■□□□□ 0.18
LINC01611-202ENST00000454172 PRKAR2AP13861 404 aaKnown RBP16.06■□□□□ 0.16
LINC01611-202ENST00000454172 PABPN1Q86U42 306 aaKnown RBP eCLIP15.99■□□□□ 0.15
LINC01611-202ENST00000454172 EVX2Q03828 476 aa15.98■□□□□ 0.15
LINC01611-202ENST00000454172 EHMT2Q96KQ7 1210 aa15.97■□□□□ 0.15
LINC01611-202ENST00000454172 PRR29P0C7W0 189 aa15.87■□□□□ 0.13
LINC01611-202ENST00000454172 CHADLQ6NUI6 762 aa15.86■□□□□ 0.13
LINC01611-202ENST00000454172 C19orf67A6NJJ6 358 aa15.83■□□□□ 0.12
LINC01611-202ENST00000454172 GABBR2O75899 941 aa15.62■□□□□ 0.09
LINC01611-202ENST00000454172 FARP1Q9Y4F1 1045 aaPredicted RBP15.61■□□□□ 0.09
LINC01611-202ENST00000454172 SPDYE4A6NLX3 237 aa15.57■□□□□ 0.08
LINC01611-202ENST00000454172 CD44P16070 742 aaKnown RBP15.54■□□□□ 0.08
LINC01611-202ENST00000454172 STAG3Q9UJ98 1225 aa15.52■□□□□ 0.08
LINC01611-202ENST00000454172 CREBZFQ9NS37 354 aa15.46■□□□□ 0.07
LINC01611-202ENST00000454172 CLCN6P51797 869 aa15.33■□□□□ 0.04
LINC01611-202ENST00000454172 ZRANB1Q9UGI0 708 aa15.31■□□□□ 0.04
LINC01611-202ENST00000454172 ZNF579Q8NAF0 562 aaKnown RBP15.3■□□□□ 0.04
LINC01611-202ENST00000454172 POTEIP0CG38 1075 aa15.29■□□□□ 0.04
LINC01611-202ENST00000454172 LHX8Q68G74 356 aa15.27■□□□□ 0.04
LINC01611-202ENST00000454172 MNX1P50219 401 aaPredicted RBP15.19■□□□□ 0.02
LINC01611-202ENST00000454172 PROM2Q8N271 834 aa15.19■□□□□ 0.02
LINC01611-202ENST00000454172 DCBLD2Q96PD2 775 aa15.19■□□□□ 0.02
LINC01611-202ENST00000454172 PAK3O75914 559 aaPredicted RBP15.17■□□□□ 0.02
LINC01611-202ENST00000454172 NPM1P06748 294 aaKnown RBP eCLIP15.17■□□□□ 0.02
LINC01611-202ENST00000454172 GALR2O43603 387 aaPredicted RBP15.12■□□□□ 0.01
LINC01611-202ENST00000454172 PHF12Q96QT6 1004 aa15.1■□□□□ 0.01
LINC01611-202ENST00000454172 TSPYL2Q9H2G4 693 aaPredicted RBP14.91□□□□□ -0.02
LINC01611-202ENST00000454172 MS4A3Q96HJ5 214 aa14.89□□□□□ -0.03
LINC01611-202ENST00000454172 MIER1Q8N108 512 aa14.87□□□□□ -0.03
LINC01611-202ENST00000454172 PLEKHG5O94827 1062 aa14.86□□□□□ -0.03
LINC01611-202ENST00000454172 CCDC61Q9Y6R9 512 aa14.84□□□□□ -0.03
LINC01611-202ENST00000454172 PELP1Q8IZL8 1130 aaKnown RBP14.83□□□□□ -0.04
LINC01611-202ENST00000454172 ASTLQ6HA08 431 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms