RNA–Protein interactions for RNA: ENST00000453107.5

CDC40-206, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 306 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-206ENST00000453107 AEBP2Q6ZN18 517 aaPredicted RBP16.3■□□□□ 0.2
CDC40-206ENST00000453107 CHIC1Q5VXU3 224 aa15.51■□□□□ 0.07
CDC40-206ENST00000453107 SENP3Q9H4L4 574 aaPredicted RBP13.98□□□□□ -0.17
CDC40-206ENST00000453107 PHF23Q9BUL5 403 aaPredicted RBP13.78□□□□□ -0.2
CDC40-206ENST00000453107 FOXD1Q16676 465 aa13□□□□□ -0.33
CDC40-206ENST00000453107 PLPPR3Q6T4P5 718 aa12.4□□□□□ -0.42
CDC40-206ENST00000453107 MSH5O43196 834 aa12.23□□□□□ -0.45
CDC40-206ENST00000453107 PIAS4Q8N2W9 510 aaPredicted RBP12.12□□□□□ -0.47
CDC40-206ENST00000453107 PPP6R1Q9UPN7 881 aa12.12□□□□□ -0.47
CDC40-206ENST00000453107 ADRA2BP18089 450 aa12.06□□□□□ -0.48
CDC40-206ENST00000453107 POTEDQ86YR6 584 aa11.92□□□□□ -0.5
CDC40-206ENST00000453107 SCAF1Q9H7N4 1312 aaKnown RBP11.15□□□□□ -0.62
CDC40-206ENST00000453107 MAPK8IP2Q13387 824 aaPredicted RBP11.08□□□□□ -0.64
CDC40-206ENST00000453107 DMRT2Q9Y5R5 561 aa11.08□□□□□ -0.64
CDC40-206ENST00000453107 PPP4R3CPQ6ZMV5 832 aa10.84□□□□□ -0.67
CDC40-206ENST00000453107 HOXD11P31277 338 aaPredicted RBP10.68□□□□□ -0.7
CDC40-206ENST00000453107 CNKSR2Q8WXI2 1034 aa10.68□□□□□ -0.7
CDC40-206ENST00000453107 RNF216Q9NWF9 866 aaPredicted RBP10.59□□□□□ -0.71
CDC40-206ENST00000453107 DCAF8L1A6NGE4 600 aa10.54□□□□□ -0.72
CDC40-206ENST00000453107 NCBP3Q53F19 620 aaKnown RBP10.46□□□□□ -0.73
CDC40-206ENST00000453107 CACNB1Q02641 598 aaPredicted RBP10.45□□□□□ -0.74
CDC40-206ENST00000453107 DNAJC5BQ9UF47 199 aa10.41□□□□□ -0.74
CDC40-206ENST00000453107 RNF39Q9H2S5 420 aa10.4□□□□□ -0.74
CDC40-206ENST00000453107 C1QBPQ07021 282 aaKnown RBP10.3□□□□□ -0.76
CDC40-206ENST00000453107 NPM3O75607 178 aaKnown RBP10.25□□□□□ -0.77
CDC40-206ENST00000453107 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.13□□□□□ -0.79
CDC40-206ENST00000453107 KCNA4P22459 653 aa10.01□□□□□ -0.81
CDC40-206ENST00000453107 U3KPZ7 1027 aaPredicted RBP9.9□□□□□ -0.82
CDC40-206ENST00000453107 SLC4A2P04920 1241 aa9.8□□□□□ -0.84
CDC40-206ENST00000453107 CAPN15O75808 1086 aa9.74□□□□□ -0.85
CDC40-206ENST00000453107 SPINK5Q9NQ38 1064 aaPredicted RBP9.74□□□□□ -0.85
CDC40-206ENST00000453107 DSG3P32926 999 aa9.73□□□□□ -0.85
CDC40-206ENST00000453107 APLP2Q06481 763 aa9.71□□□□□ -0.86
CDC40-206ENST00000453107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.7□□□□□ -0.86
CDC40-206ENST00000453107 HNRNPUL2Q1KMD3 747 aaKnown RBP9.7□□□□□ -0.86
CDC40-206ENST00000453107 SAMD1Q6SPF0 538 aaPredicted RBP9.62□□□□□ -0.87
CDC40-206ENST00000453107 ZNF219Q9P2Y4 722 aaPredicted RBP9.61□□□□□ -0.87
CDC40-206ENST00000453107 TRHP20396 242 aaPredicted RBP9.57□□□□□ -0.88
CDC40-206ENST00000453107 MYCNP04198 464 aaPredicted RBP9.51□□□□□ -0.89
CDC40-206ENST00000453107 ABCB7O75027 752 aa9.47□□□□□ -0.89
CDC40-206ENST00000453107 SLC4A1APQ9BWU0 796 aaKnown RBP9.45□□□□□ -0.9
CDC40-206ENST00000453107 FOXD4L1Q9NU39 408 aa9.38□□□□□ -0.91
CDC40-206ENST00000453107 POLA2Q14181 598 aa9.35□□□□□ -0.91
CDC40-206ENST00000453107 POTEHQ6S545 545 aa9.34□□□□□ -0.91
CDC40-206ENST00000453107 RBM42Q9BTD8 480 aaKnown RBP9.32□□□□□ -0.92
CDC40-206ENST00000453107 ATF5Q9Y2D1 282 aaPredicted RBP9.23□□□□□ -0.93
CDC40-206ENST00000453107 ZBTB12Q9Y330 459 aaPredicted RBP9.2□□□□□ -0.94
CDC40-206ENST00000453107 ZBTB22O15209 634 aa9.17□□□□□ -0.94
CDC40-206ENST00000453107 ATXN8OSP0DMR3 200 aa9.17□□□□□ -0.94
CDC40-206ENST00000453107 AKT1S1Q96B36 256 aa9.1□□□□□ -0.95
CDC40-206ENST00000453107 CHRDL2Q6WN34 429 aa9.09□□□□□ -0.95
CDC40-206ENST00000453107 OSCARQ8IYS5 282 aa8.99□□□□□ -0.97
CDC40-206ENST00000453107 REM2Q8IYK8 340 aaPredicted RBP8.98□□□□□ -0.97
CDC40-206ENST00000453107 FBLN2P98095 1184 aa8.94□□□□□ -0.98
CDC40-206ENST00000453107 SPDYE2BA6NHP3 402 aa8.91□□□□□ -0.98
CDC40-206ENST00000453107 SPDYE6P0CI01 402 aa8.91□□□□□ -0.98
CDC40-206ENST00000453107 SPDYE2Q495Y8 402 aa8.91□□□□□ -0.98
CDC40-206ENST00000453107 PITPNM1O00562 1244 aa8.85□□□□□ -0.99
CDC40-206ENST00000453107 PIP4P2Q8N4L2 257 aa8.85□□□□□ -0.99
CDC40-206ENST00000453107 FXR2P51116 673 aaKnown RBP eCLIP8.83□□□□□ -1
CDC40-206ENST00000453107 MKRN4PQ13434 485 aaPredicted RBP8.82□□□□□ -1
CDC40-206ENST00000453107 CSRNP3Q8WYN3 585 aa8.77□□□□□ -1.01
CDC40-206ENST00000453107 ZNF692Q9BU19 519 aaPredicted RBP8.77□□□□□ -1.01
CDC40-206ENST00000453107 SSUH2Q9Y2M2 353 aa8.76□□□□□ -1.01
CDC40-206ENST00000453107 SPDYE1Q8NFV5 336 aaPredicted RBP8.75□□□□□ -1.01
CDC40-206ENST00000453107 SP7Q8TDD2 431 aaPredicted RBP8.75□□□□□ -1.01
CDC40-206ENST00000453107 HAX1O00165 279 aa8.71□□□□□ -1.02
CDC40-206ENST00000453107 CLEC11AQ9Y240 323 aa8.67□□□□□ -1.02
CDC40-206ENST00000453107 PRKAR2AP13861 404 aaKnown RBP8.63□□□□□ -1.03
CDC40-206ENST00000453107 PABPN1Q86U42 306 aaKnown RBP eCLIP8.61□□□□□ -1.03
CDC40-206ENST00000453107 PRR29P0C7W0 189 aa8.57□□□□□ -1.04
CDC40-206ENST00000453107 EVX2Q03828 476 aa8.57□□□□□ -1.04
CDC40-206ENST00000453107 EHMT2Q96KQ7 1210 aa8.55□□□□□ -1.04
CDC40-206ENST00000453107 C19orf67A6NJJ6 358 aa8.54□□□□□ -1.04
CDC40-206ENST00000453107 CHADLQ6NUI6 762 aa8.48□□□□□ -1.05
CDC40-206ENST00000453107 STAG3Q9UJ98 1225 aa8.45□□□□□ -1.06
CDC40-206ENST00000453107 FARP1Q9Y4F1 1045 aaPredicted RBP8.43□□□□□ -1.06
CDC40-206ENST00000453107 SPDYE4A6NLX3 237 aa8.41□□□□□ -1.06
CDC40-206ENST00000453107 GABBR2O75899 941 aa8.4□□□□□ -1.06
CDC40-206ENST00000453107 CLCN6P51797 869 aa8.4□□□□□ -1.06
CDC40-206ENST00000453107 CD44P16070 742 aaKnown RBP8.36□□□□□ -1.07
CDC40-206ENST00000453107 CREBZFQ9NS37 354 aa8.33□□□□□ -1.08
CDC40-206ENST00000453107 PROM2Q8N271 834 aa8.25□□□□□ -1.09
CDC40-206ENST00000453107 ZNF579Q8NAF0 562 aaKnown RBP8.25□□□□□ -1.09
CDC40-206ENST00000453107 ZRANB1Q9UGI0 708 aa8.23□□□□□ -1.09
CDC40-206ENST00000453107 NPM1P06748 294 aaKnown RBP eCLIP8.22□□□□□ -1.09
CDC40-206ENST00000453107 LHX8Q68G74 356 aa8.21□□□□□ -1.1
CDC40-206ENST00000453107 PAK3O75914 559 aaPredicted RBP8.2□□□□□ -1.1
CDC40-206ENST00000453107 POTEIP0CG38 1075 aa8.2□□□□□ -1.1
CDC40-206ENST00000453107 MNX1P50219 401 aaPredicted RBP8.2□□□□□ -1.1
CDC40-206ENST00000453107 DCBLD2Q96PD2 775 aa8.18□□□□□ -1.1
CDC40-206ENST00000453107 GALR2O43603 387 aaPredicted RBP8.11□□□□□ -1.11
CDC40-206ENST00000453107 PLEKHG5O94827 1062 aa8.07□□□□□ -1.12
CDC40-206ENST00000453107 PHF12Q96QT6 1004 aa8.07□□□□□ -1.12
CDC40-206ENST00000453107 MIER1Q8N108 512 aa8.05□□□□□ -1.12
CDC40-206ENST00000453107 CCDC61Q9Y6R9 512 aa8.01□□□□□ -1.13
CDC40-206ENST00000453107 ASTLQ6HA08 431 aaPredicted RBP8□□□□□ -1.13
CDC40-206ENST00000453107 TSPYL2Q9H2G4 693 aaPredicted RBP8□□□□□ -1.13
CDC40-206ENST00000453107 MS4A3Q96HJ5 214 aa7.98□□□□□ -1.13
CDC40-206ENST00000453107 ZBTB47Q9UFB7 747 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms