RNA–Protein interactions for RNA: ENST00000452104.5

PRKD3-205, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-205ENST00000452104 AEBP2Q6ZN18 517 aaPredicted RBP22.92■■□□□ 1.26
PRKD3-205ENST00000452104 CHIC1Q5VXU3 224 aa21.7■■□□□ 1.06
PRKD3-205ENST00000452104 SENP3Q9H4L4 574 aaPredicted RBP19.69■□□□□ 0.74
PRKD3-205ENST00000452104 PHF23Q9BUL5 403 aaPredicted RBP19.36■□□□□ 0.69
PRKD3-205ENST00000452104 FOXD1Q16676 465 aa18.29■□□□□ 0.52
PRKD3-205ENST00000452104 PLPPR3Q6T4P5 718 aa17.31■□□□□ 0.36
PRKD3-205ENST00000452104 MSH5O43196 834 aa17.26■□□□□ 0.35
PRKD3-205ENST00000452104 PIAS4Q8N2W9 510 aaPredicted RBP17.1■□□□□ 0.33
PRKD3-205ENST00000452104 POTEDQ86YR6 584 aa17.02■□□□□ 0.32
PRKD3-205ENST00000452104 PPP6R1Q9UPN7 881 aa16.95■□□□□ 0.3
PRKD3-205ENST00000452104 ADRA2BP18089 450 aa16.91■□□□□ 0.3
PRKD3-205ENST00000452104 SCAF1Q9H7N4 1312 aaKnown RBP15.6■□□□□ 0.09
PRKD3-205ENST00000452104 MAPK8IP2Q13387 824 aaPredicted RBP15.56■□□□□ 0.08
PRKD3-205ENST00000452104 DMRT2Q9Y5R5 561 aa15.56■□□□□ 0.08
PRKD3-205ENST00000452104 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
PRKD3-205ENST00000452104 DCAF8L1A6NGE4 600 aa14.94□□□□□ -0.02
PRKD3-205ENST00000452104 HOXD11P31277 338 aaPredicted RBP14.93□□□□□ -0.02
PRKD3-205ENST00000452104 CNKSR2Q8WXI2 1034 aa14.9□□□□□ -0.02
PRKD3-205ENST00000452104 CACNB1Q02641 598 aaPredicted RBP14.88□□□□□ -0.03
PRKD3-205ENST00000452104 RNF216Q9NWF9 866 aaPredicted RBP14.8□□□□□ -0.04
PRKD3-205ENST00000452104 RNF39Q9H2S5 420 aa14.67□□□□□ -0.06
PRKD3-205ENST00000452104 NCBP3Q53F19 620 aaKnown RBP14.57□□□□□ -0.08
PRKD3-205ENST00000452104 DNAJC5BQ9UF47 199 aa14.5□□□□□ -0.09
PRKD3-205ENST00000452104 C1QBPQ07021 282 aaKnown RBP14.49□□□□□ -0.09
PRKD3-205ENST00000452104 NPM3O75607 178 aaKnown RBP14.26□□□□□ -0.13
PRKD3-205ENST00000452104 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.25□□□□□ -0.13
PRKD3-205ENST00000452104 U3KPZ7 1027 aaPredicted RBP13.89□□□□□ -0.19
PRKD3-205ENST00000452104 KCNA4P22459 653 aa13.85□□□□□ -0.19
PRKD3-205ENST00000452104 CAPN15O75808 1086 aa13.75□□□□□ -0.21
PRKD3-205ENST00000452104 SPINK5Q9NQ38 1064 aaPredicted RBP13.71□□□□□ -0.21
PRKD3-205ENST00000452104 DSG3P32926 999 aa13.68□□□□□ -0.22
PRKD3-205ENST00000452104 SLC4A2P04920 1241 aa13.64□□□□□ -0.23
PRKD3-205ENST00000452104 APLP2Q06481 763 aa13.62□□□□□ -0.23
PRKD3-205ENST00000452104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.56□□□□□ -0.24
PRKD3-205ENST00000452104 HNRNPUL2Q1KMD3 747 aaKnown RBP13.56□□□□□ -0.24
PRKD3-205ENST00000452104 ZNF219Q9P2Y4 722 aaPredicted RBP13.51□□□□□ -0.25
PRKD3-205ENST00000452104 TRHP20396 242 aaPredicted RBP13.48□□□□□ -0.25
PRKD3-205ENST00000452104 SAMD1Q6SPF0 538 aaPredicted RBP13.45□□□□□ -0.26
PRKD3-205ENST00000452104 ABCB7O75027 752 aa13.38□□□□□ -0.27
PRKD3-205ENST00000452104 POTEHQ6S545 545 aa13.33□□□□□ -0.28
PRKD3-205ENST00000452104 MYCNP04198 464 aaPredicted RBP13.26□□□□□ -0.29
PRKD3-205ENST00000452104 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
PRKD3-205ENST00000452104 SLC4A1APQ9BWU0 796 aaKnown RBP13.09□□□□□ -0.31
PRKD3-205ENST00000452104 POLA2Q14181 598 aa13.08□□□□□ -0.32
PRKD3-205ENST00000452104 FOXD4L1Q9NU39 408 aa13.03□□□□□ -0.32
PRKD3-205ENST00000452104 ZBTB12Q9Y330 459 aaPredicted RBP12.9□□□□□ -0.34
PRKD3-205ENST00000452104 ATF5Q9Y2D1 282 aaPredicted RBP12.86□□□□□ -0.35
PRKD3-205ENST00000452104 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
PRKD3-205ENST00000452104 AKT1S1Q96B36 256 aa12.77□□□□□ -0.37
PRKD3-205ENST00000452104 ZBTB22O15209 634 aa12.69□□□□□ -0.38
PRKD3-205ENST00000452104 ATXN8OSP0DMR3 200 aa12.67□□□□□ -0.38
PRKD3-205ENST00000452104 OSCARQ8IYS5 282 aa12.66□□□□□ -0.38
PRKD3-205ENST00000452104 REM2Q8IYK8 340 aaPredicted RBP12.61□□□□□ -0.39
PRKD3-205ENST00000452104 EHMT2Q96KQ7 1210 aa12.56□□□□□ -0.4
PRKD3-205ENST00000452104 FBLN2P98095 1184 aa12.49□□□□□ -0.41
PRKD3-205ENST00000452104 PIP4P2Q8N4L2 257 aa12.49□□□□□ -0.41
PRKD3-205ENST00000452104 PITPNM1O00562 1244 aa12.48□□□□□ -0.41
PRKD3-205ENST00000452104 SPDYE2BA6NHP3 402 aa12.45□□□□□ -0.42
PRKD3-205ENST00000452104 SPDYE6P0CI01 402 aa12.45□□□□□ -0.42
PRKD3-205ENST00000452104 SPDYE2Q495Y8 402 aa12.45□□□□□ -0.42
PRKD3-205ENST00000452104 SP7Q8TDD2 431 aaPredicted RBP12.44□□□□□ -0.42
PRKD3-205ENST00000452104 FXR2P51116 673 aaKnown RBP eCLIP12.4□□□□□ -0.42
PRKD3-205ENST00000452104 HAX1O00165 279 aa12.33□□□□□ -0.44
PRKD3-205ENST00000452104 MKRN4PQ13434 485 aaPredicted RBP12.28□□□□□ -0.44
PRKD3-205ENST00000452104 SPDYE1Q8NFV5 336 aaPredicted RBP12.27□□□□□ -0.45
PRKD3-205ENST00000452104 ZNF692Q9BU19 519 aaPredicted RBP12.25□□□□□ -0.45
PRKD3-205ENST00000452104 CLEC11AQ9Y240 323 aa12.23□□□□□ -0.45
PRKD3-205ENST00000452104 SSUH2Q9Y2M2 353 aa12.23□□□□□ -0.45
PRKD3-205ENST00000452104 CSRNP3Q8WYN3 585 aa12.22□□□□□ -0.45
PRKD3-205ENST00000452104 PRKAR2AP13861 404 aaKnown RBP12.17□□□□□ -0.46
PRKD3-205ENST00000452104 EVX2Q03828 476 aa12.07□□□□□ -0.48
PRKD3-205ENST00000452104 PABPN1Q86U42 306 aaKnown RBP eCLIP12.05□□□□□ -0.48
PRKD3-205ENST00000452104 PRR29P0C7W0 189 aa12.02□□□□□ -0.49
PRKD3-205ENST00000452104 C19orf67A6NJJ6 358 aa12.01□□□□□ -0.49
PRKD3-205ENST00000452104 CHADLQ6NUI6 762 aa11.96□□□□□ -0.49
PRKD3-205ENST00000452104 GABBR2O75899 941 aa11.86□□□□□ -0.51
PRKD3-205ENST00000452104 FARP1Q9Y4F1 1045 aaPredicted RBP11.81□□□□□ -0.52
PRKD3-205ENST00000452104 CD44P16070 742 aaKnown RBP11.79□□□□□ -0.52
PRKD3-205ENST00000452104 STAG3Q9UJ98 1225 aa11.76□□□□□ -0.53
PRKD3-205ENST00000452104 CLCN6P51797 869 aa11.73□□□□□ -0.53
PRKD3-205ENST00000452104 SPDYE4A6NLX3 237 aa11.69□□□□□ -0.54
PRKD3-205ENST00000452104 LHX8Q68G74 356 aa11.66□□□□□ -0.54
PRKD3-205ENST00000452104 CREBZFQ9NS37 354 aa11.64□□□□□ -0.55
PRKD3-205ENST00000452104 ZNF579Q8NAF0 562 aaKnown RBP11.6□□□□□ -0.55
PRKD3-205ENST00000452104 ZRANB1Q9UGI0 708 aa11.59□□□□□ -0.55
PRKD3-205ENST00000452104 POTEIP0CG38 1075 aa11.56□□□□□ -0.56
PRKD3-205ENST00000452104 DCBLD2Q96PD2 775 aa11.56□□□□□ -0.56
PRKD3-205ENST00000452104 PAK3O75914 559 aaPredicted RBP11.53□□□□□ -0.56
PRKD3-205ENST00000452104 NPM1P06748 294 aaKnown RBP eCLIP11.5□□□□□ -0.57
PRKD3-205ENST00000452104 GALR2O43603 387 aaPredicted RBP11.42□□□□□ -0.58
PRKD3-205ENST00000452104 MNX1P50219 401 aaPredicted RBP11.4□□□□□ -0.58
PRKD3-205ENST00000452104 PHF12Q96QT6 1004 aa11.38□□□□□ -0.59
PRKD3-205ENST00000452104 PROM2Q8N271 834 aa11.36□□□□□ -0.59
PRKD3-205ENST00000452104 PLEKHG5O94827 1062 aa11.26□□□□□ -0.61
PRKD3-205ENST00000452104 MS4A3Q96HJ5 214 aa11.24□□□□□ -0.61
PRKD3-205ENST00000452104 TSPYL2Q9H2G4 693 aaPredicted RBP11.23□□□□□ -0.61
PRKD3-205ENST00000452104 ASTLQ6HA08 431 aaPredicted RBP11.21□□□□□ -0.61
PRKD3-205ENST00000452104 OTUD5Q96G74 571 aa11.19□□□□□ -0.62
PRKD3-205ENST00000452104 PELP1Q8IZL8 1130 aaKnown RBP11.18□□□□□ -0.62
PRKD3-205ENST00000452104 SLC39A7Q92504 469 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms