RNA–Protein interactions for RNA: ENST00000450441.5

KIF3A-205, Transcript of kinesin family member 3A, humanhuman

TSL 5

Gene KIF3A, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-205ENST00000450441 AEBP2Q6ZN18 517 aaPredicted RBP24.32■■□□□ 1.48
KIF3A-205ENST00000450441 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
KIF3A-205ENST00000450441 SENP3Q9H4L4 574 aaPredicted RBP20.82■□□□□ 0.92
KIF3A-205ENST00000450441 PHF23Q9BUL5 403 aaPredicted RBP20.51■□□□□ 0.87
KIF3A-205ENST00000450441 FOXD1Q16676 465 aa19.38■□□□□ 0.69
KIF3A-205ENST00000450441 PLPPR3Q6T4P5 718 aa18.35■□□□□ 0.53
KIF3A-205ENST00000450441 MSH5O43196 834 aa18.23■□□□□ 0.51
KIF3A-205ENST00000450441 PIAS4Q8N2W9 510 aaPredicted RBP18.12■□□□□ 0.49
KIF3A-205ENST00000450441 PPP6R1Q9UPN7 881 aa18.01■□□□□ 0.47
KIF3A-205ENST00000450441 ADRA2BP18089 450 aa17.97■□□□□ 0.47
KIF3A-205ENST00000450441 POTEDQ86YR6 584 aa17.97■□□□□ 0.47
KIF3A-205ENST00000450441 MAPK8IP2Q13387 824 aaPredicted RBP16.53■□□□□ 0.24
KIF3A-205ENST00000450441 SCAF1Q9H7N4 1312 aaKnown RBP16.49■□□□□ 0.23
KIF3A-205ENST00000450441 DMRT2Q9Y5R5 561 aa16.47■□□□□ 0.23
KIF3A-205ENST00000450441 PPP4R3CPQ6ZMV5 832 aa16.05■□□□□ 0.16
KIF3A-205ENST00000450441 DCAF8L1A6NGE4 600 aa15.86■□□□□ 0.13
KIF3A-205ENST00000450441 HOXD11P31277 338 aaPredicted RBP15.81■□□□□ 0.12
KIF3A-205ENST00000450441 CNKSR2Q8WXI2 1034 aa15.79■□□□□ 0.12
KIF3A-205ENST00000450441 CACNB1Q02641 598 aaPredicted RBP15.73■□□□□ 0.11
KIF3A-205ENST00000450441 RNF216Q9NWF9 866 aaPredicted RBP15.67■□□□□ 0.1
KIF3A-205ENST00000450441 RNF39Q9H2S5 420 aa15.52■□□□□ 0.08
KIF3A-205ENST00000450441 NCBP3Q53F19 620 aaKnown RBP15.44■□□□□ 0.06
KIF3A-205ENST00000450441 C1QBPQ07021 282 aaKnown RBP15.3■□□□□ 0.04
KIF3A-205ENST00000450441 DNAJC5BQ9UF47 199 aa15.29■□□□□ 0.04
KIF3A-205ENST00000450441 NPM3O75607 178 aaKnown RBP15.17■□□□□ 0.02
KIF3A-205ENST00000450441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.11■□□□□ 0.01
KIF3A-205ENST00000450441 KCNA4P22459 653 aa14.77□□□□□ -0.05
KIF3A-205ENST00000450441 U3KPZ7 1027 aaPredicted RBP14.74□□□□□ -0.05
KIF3A-205ENST00000450441 CAPN15O75808 1086 aa14.59□□□□□ -0.07
KIF3A-205ENST00000450441 SPINK5Q9NQ38 1064 aaPredicted RBP14.56□□□□□ -0.08
KIF3A-205ENST00000450441 SLC4A2P04920 1241 aa14.5□□□□□ -0.09
KIF3A-205ENST00000450441 DSG3P32926 999 aa14.49□□□□□ -0.09
KIF3A-205ENST00000450441 APLP2Q06481 763 aa14.38□□□□□ -0.11
KIF3A-205ENST00000450441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.33□□□□□ -0.12
KIF3A-205ENST00000450441 TRHP20396 242 aaPredicted RBP14.33□□□□□ -0.12
KIF3A-205ENST00000450441 HNRNPUL2Q1KMD3 747 aaKnown RBP14.33□□□□□ -0.12
KIF3A-205ENST00000450441 ZNF219Q9P2Y4 722 aaPredicted RBP14.29□□□□□ -0.12
KIF3A-205ENST00000450441 SAMD1Q6SPF0 538 aaPredicted RBP14.23□□□□□ -0.13
KIF3A-205ENST00000450441 ABCB7O75027 752 aa14.22□□□□□ -0.13
KIF3A-205ENST00000450441 POTEHQ6S545 545 aa14.08□□□□□ -0.16
KIF3A-205ENST00000450441 MYCNP04198 464 aaPredicted RBP14.06□□□□□ -0.16
KIF3A-205ENST00000450441 SLC4A1APQ9BWU0 796 aaKnown RBP13.95□□□□□ -0.18
KIF3A-205ENST00000450441 POLA2Q14181 598 aa13.89□□□□□ -0.19
KIF3A-205ENST00000450441 RBM42Q9BTD8 480 aaKnown RBP13.88□□□□□ -0.19
KIF3A-205ENST00000450441 FOXD4L1Q9NU39 408 aa13.85□□□□□ -0.19
KIF3A-205ENST00000450441 ATF5Q9Y2D1 282 aaPredicted RBP13.7□□□□□ -0.22
KIF3A-205ENST00000450441 ZBTB12Q9Y330 459 aaPredicted RBP13.63□□□□□ -0.23
KIF3A-205ENST00000450441 CHRDL2Q6WN34 429 aa13.6□□□□□ -0.23
KIF3A-205ENST00000450441 ZBTB22O15209 634 aa13.55□□□□□ -0.24
KIF3A-205ENST00000450441 AKT1S1Q96B36 256 aa13.51□□□□□ -0.25
KIF3A-205ENST00000450441 OSCARQ8IYS5 282 aa13.46□□□□□ -0.25
KIF3A-205ENST00000450441 ATXN8OSP0DMR3 200 aa13.42□□□□□ -0.26
KIF3A-205ENST00000450441 REM2Q8IYK8 340 aaPredicted RBP13.37□□□□□ -0.27
KIF3A-205ENST00000450441 FBLN2P98095 1184 aa13.25□□□□□ -0.29
KIF3A-205ENST00000450441 PIP4P2Q8N4L2 257 aa13.24□□□□□ -0.29
KIF3A-205ENST00000450441 PITPNM1O00562 1244 aa13.23□□□□□ -0.29
KIF3A-205ENST00000450441 SPDYE2BA6NHP3 402 aa13.17□□□□□ -0.3
KIF3A-205ENST00000450441 SPDYE6P0CI01 402 aa13.17□□□□□ -0.3
KIF3A-205ENST00000450441 SPDYE2Q495Y8 402 aa13.17□□□□□ -0.3
KIF3A-205ENST00000450441 SP7Q8TDD2 431 aaPredicted RBP13.14□□□□□ -0.31
KIF3A-205ENST00000450441 FXR2P51116 673 aaKnown RBP eCLIP13.12□□□□□ -0.31
KIF3A-205ENST00000450441 HAX1O00165 279 aa13.06□□□□□ -0.32
KIF3A-205ENST00000450441 MKRN4PQ13434 485 aaPredicted RBP13.06□□□□□ -0.32
KIF3A-205ENST00000450441 ZNF692Q9BU19 519 aaPredicted RBP13.01□□□□□ -0.33
KIF3A-205ENST00000450441 SPDYE1Q8NFV5 336 aaPredicted RBP12.99□□□□□ -0.33
KIF3A-205ENST00000450441 CLEC11AQ9Y240 323 aa12.99□□□□□ -0.33
KIF3A-205ENST00000450441 SSUH2Q9Y2M2 353 aa12.96□□□□□ -0.33
KIF3A-205ENST00000450441 PRKAR2AP13861 404 aaKnown RBP12.9□□□□□ -0.34
KIF3A-205ENST00000450441 CSRNP3Q8WYN3 585 aa12.83□□□□□ -0.36
KIF3A-205ENST00000450441 EVX2Q03828 476 aa12.82□□□□□ -0.36
KIF3A-205ENST00000450441 PABPN1Q86U42 306 aaKnown RBP eCLIP12.81□□□□□ -0.36
KIF3A-205ENST00000450441 EHMT2Q96KQ7 1210 aa12.8□□□□□ -0.36
KIF3A-205ENST00000450441 PRR29P0C7W0 189 aa12.75□□□□□ -0.37
KIF3A-205ENST00000450441 C19orf67A6NJJ6 358 aa12.71□□□□□ -0.37
KIF3A-205ENST00000450441 CHADLQ6NUI6 762 aa12.71□□□□□ -0.37
KIF3A-205ENST00000450441 GABBR2O75899 941 aa12.57□□□□□ -0.4
KIF3A-205ENST00000450441 FARP1Q9Y4F1 1045 aaPredicted RBP12.52□□□□□ -0.41
KIF3A-205ENST00000450441 CD44P16070 742 aaKnown RBP12.49□□□□□ -0.41
KIF3A-205ENST00000450441 STAG3Q9UJ98 1225 aa12.44□□□□□ -0.42
KIF3A-205ENST00000450441 SPDYE4A6NLX3 237 aa12.43□□□□□ -0.42
KIF3A-205ENST00000450441 CREBZFQ9NS37 354 aa12.36□□□□□ -0.43
KIF3A-205ENST00000450441 CLCN6P51797 869 aa12.35□□□□□ -0.43
KIF3A-205ENST00000450441 LHX8Q68G74 356 aa12.33□□□□□ -0.44
KIF3A-205ENST00000450441 ZRANB1Q9UGI0 708 aa12.3□□□□□ -0.44
KIF3A-205ENST00000450441 ZNF579Q8NAF0 562 aaKnown RBP12.28□□□□□ -0.44
KIF3A-205ENST00000450441 POTEIP0CG38 1075 aa12.26□□□□□ -0.45
KIF3A-205ENST00000450441 DCBLD2Q96PD2 775 aa12.24□□□□□ -0.45
KIF3A-205ENST00000450441 PAK3O75914 559 aaPredicted RBP12.21□□□□□ -0.45
KIF3A-205ENST00000450441 NPM1P06748 294 aaKnown RBP eCLIP12.18□□□□□ -0.46
KIF3A-205ENST00000450441 GALR2O43603 387 aaPredicted RBP12.14□□□□□ -0.47
KIF3A-205ENST00000450441 MNX1P50219 401 aaPredicted RBP12.11□□□□□ -0.47
KIF3A-205ENST00000450441 PHF12Q96QT6 1004 aa12.1□□□□□ -0.47
KIF3A-205ENST00000450441 PROM2Q8N271 834 aa12.06□□□□□ -0.48
KIF3A-205ENST00000450441 TSPYL2Q9H2G4 693 aaPredicted RBP11.94□□□□□ -0.5
KIF3A-205ENST00000450441 PLEKHG5O94827 1062 aa11.93□□□□□ -0.5
KIF3A-205ENST00000450441 MS4A3Q96HJ5 214 aa11.93□□□□□ -0.5
KIF3A-205ENST00000450441 MIER1Q8N108 512 aa11.89□□□□□ -0.51
KIF3A-205ENST00000450441 PELP1Q8IZL8 1130 aaKnown RBP11.88□□□□□ -0.51
KIF3A-205ENST00000450441 ASTLQ6HA08 431 aaPredicted RBP11.87□□□□□ -0.51
KIF3A-205ENST00000450441 POTEB2H3BUK9 544 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms