RNA–Protein interactions for RNA: ENST00000449202.5

CLIP4-207, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-207ENST00000449202 AEBP2Q6ZN18 517 aaPredicted RBP21.25■□□□□ 0.99
CLIP4-207ENST00000449202 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
CLIP4-207ENST00000449202 SENP3Q9H4L4 574 aaPredicted RBP18.13■□□□□ 0.49
CLIP4-207ENST00000449202 PHF23Q9BUL5 403 aaPredicted RBP18.02■□□□□ 0.48
CLIP4-207ENST00000449202 FOXD1Q16676 465 aa16.81■□□□□ 0.28
CLIP4-207ENST00000449202 PLPPR3Q6T4P5 718 aa16.59■□□□□ 0.25
CLIP4-207ENST00000449202 PPP6R1Q9UPN7 881 aa15.96■□□□□ 0.15
CLIP4-207ENST00000449202 ADRA2BP18089 450 aa15.94■□□□□ 0.14
CLIP4-207ENST00000449202 PIAS4Q8N2W9 510 aaPredicted RBP15.8■□□□□ 0.12
CLIP4-207ENST00000449202 MSH5O43196 834 aa15.65■□□□□ 0.1
CLIP4-207ENST00000449202 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
CLIP4-207ENST00000449202 POTEDQ86YR6 584 aa14.63□□□□□ -0.07
CLIP4-207ENST00000449202 PPP4R3CPQ6ZMV5 832 aa14.57□□□□□ -0.08
CLIP4-207ENST00000449202 MAPK8IP2Q13387 824 aaPredicted RBP14.52□□□□□ -0.09
CLIP4-207ENST00000449202 DMRT2Q9Y5R5 561 aa14.43□□□□□ -0.1
CLIP4-207ENST00000449202 CNKSR2Q8WXI2 1034 aa14.23□□□□□ -0.13
CLIP4-207ENST00000449202 NCBP3Q53F19 620 aaKnown RBP14.16□□□□□ -0.14
CLIP4-207ENST00000449202 HOXD11P31277 338 aaPredicted RBP14.03□□□□□ -0.16
CLIP4-207ENST00000449202 RNF216Q9NWF9 866 aaPredicted RBP14.03□□□□□ -0.16
CLIP4-207ENST00000449202 KCNA4P22459 653 aa13.94□□□□□ -0.18
CLIP4-207ENST00000449202 NPM3O75607 178 aaKnown RBP13.91□□□□□ -0.18
CLIP4-207ENST00000449202 DCAF8L1A6NGE4 600 aa13.76□□□□□ -0.21
CLIP4-207ENST00000449202 DNAJC5BQ9UF47 199 aa13.62□□□□□ -0.23
CLIP4-207ENST00000449202 RNF39Q9H2S5 420 aa13.37□□□□□ -0.27
CLIP4-207ENST00000449202 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.35□□□□□ -0.27
CLIP4-207ENST00000449202 SLC4A1APQ9BWU0 796 aaKnown RBP13.25□□□□□ -0.29
CLIP4-207ENST00000449202 C1QBPQ07021 282 aaKnown RBP13.21□□□□□ -0.29
CLIP4-207ENST00000449202 SLC4A2P04920 1241 aa13.19□□□□□ -0.3
CLIP4-207ENST00000449202 CACNB1Q02641 598 aaPredicted RBP13.17□□□□□ -0.3
CLIP4-207ENST00000449202 U3KPZ7 1027 aaPredicted RBP13.11□□□□□ -0.31
CLIP4-207ENST00000449202 FOXD4L1Q9NU39 408 aa12.93□□□□□ -0.34
CLIP4-207ENST00000449202 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
CLIP4-207ENST00000449202 HNRNPUL2Q1KMD3 747 aaKnown RBP12.91□□□□□ -0.34
CLIP4-207ENST00000449202 MYCNP04198 464 aaPredicted RBP12.88□□□□□ -0.35
CLIP4-207ENST00000449202 APLP2Q06481 763 aa12.84□□□□□ -0.35
CLIP4-207ENST00000449202 SAMD1Q6SPF0 538 aaPredicted RBP12.84□□□□□ -0.35
CLIP4-207ENST00000449202 ZBTB22O15209 634 aa12.82□□□□□ -0.36
CLIP4-207ENST00000449202 SPINK5Q9NQ38 1064 aaPredicted RBP12.79□□□□□ -0.36
CLIP4-207ENST00000449202 CAPN15O75808 1086 aa12.77□□□□□ -0.37
CLIP4-207ENST00000449202 ZNF219Q9P2Y4 722 aaPredicted RBP12.68□□□□□ -0.38
CLIP4-207ENST00000449202 TRHP20396 242 aaPredicted RBP12.63□□□□□ -0.39
CLIP4-207ENST00000449202 DSG3P32926 999 aa12.62□□□□□ -0.39
CLIP4-207ENST00000449202 EHMT2Q96KQ7 1210 aa12.55□□□□□ -0.4
CLIP4-207ENST00000449202 ATXN8OSP0DMR3 200 aa12.54□□□□□ -0.4
CLIP4-207ENST00000449202 CSRNP3Q8WYN3 585 aa12.54□□□□□ -0.4
CLIP4-207ENST00000449202 ATF5Q9Y2D1 282 aaPredicted RBP12.5□□□□□ -0.41
CLIP4-207ENST00000449202 ABCB7O75027 752 aa12.48□□□□□ -0.41
CLIP4-207ENST00000449202 POLA2Q14181 598 aa12.39□□□□□ -0.43
CLIP4-207ENST00000449202 ZBTB12Q9Y330 459 aaPredicted RBP12.23□□□□□ -0.45
CLIP4-207ENST00000449202 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
CLIP4-207ENST00000449202 FBLN2P98095 1184 aa12.05□□□□□ -0.48
CLIP4-207ENST00000449202 OSCARQ8IYS5 282 aa11.98□□□□□ -0.49
CLIP4-207ENST00000449202 MKRN4PQ13434 485 aaPredicted RBP11.97□□□□□ -0.49
CLIP4-207ENST00000449202 AKT1S1Q96B36 256 aa11.86□□□□□ -0.51
CLIP4-207ENST00000449202 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
CLIP4-207ENST00000449202 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
CLIP4-207ENST00000449202 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
CLIP4-207ENST00000449202 ZNF692Q9BU19 519 aaPredicted RBP11.74□□□□□ -0.53
CLIP4-207ENST00000449202 SSUH2Q9Y2M2 353 aa11.73□□□□□ -0.53
CLIP4-207ENST00000449202 REM2Q8IYK8 340 aaPredicted RBP11.72□□□□□ -0.53
CLIP4-207ENST00000449202 CHRDL2Q6WN34 429 aa11.64□□□□□ -0.55
CLIP4-207ENST00000449202 SPDYE4A6NLX3 237 aa11.6□□□□□ -0.55
CLIP4-207ENST00000449202 PITPNM1O00562 1244 aa11.59□□□□□ -0.55
CLIP4-207ENST00000449202 PABPN1Q86U42 306 aaKnown RBP eCLIP11.57□□□□□ -0.56
CLIP4-207ENST00000449202 SPDYE1Q8NFV5 336 aaPredicted RBP11.56□□□□□ -0.56
CLIP4-207ENST00000449202 POTEHQ6S545 545 aa11.54□□□□□ -0.56
CLIP4-207ENST00000449202 CLEC11AQ9Y240 323 aa11.47□□□□□ -0.57
CLIP4-207ENST00000449202 FXR2P51116 673 aaKnown RBP eCLIP11.43□□□□□ -0.58
CLIP4-207ENST00000449202 PIP4P2Q8N4L2 257 aa11.43□□□□□ -0.58
CLIP4-207ENST00000449202 PROM2Q8N271 834 aa11.4□□□□□ -0.58
CLIP4-207ENST00000449202 STAG3Q9UJ98 1225 aa11.37□□□□□ -0.59
CLIP4-207ENST00000449202 PRR29P0C7W0 189 aa11.36□□□□□ -0.59
CLIP4-207ENST00000449202 FKBP8Q14318 412 aa11.35□□□□□ -0.59
CLIP4-207ENST00000449202 PRKAR2AP13861 404 aaKnown RBP11.29□□□□□ -0.6
CLIP4-207ENST00000449202 CHADLQ6NUI6 762 aa11.2□□□□□ -0.62
CLIP4-207ENST00000449202 CREBZFQ9NS37 354 aa11.16□□□□□ -0.62
CLIP4-207ENST00000449202 HAX1O00165 279 aa11.12□□□□□ -0.63
CLIP4-207ENST00000449202 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
CLIP4-207ENST00000449202 FBXO3Q9UK99 471 aa11.07□□□□□ -0.64
CLIP4-207ENST00000449202 C19orf67A6NJJ6 358 aa11.05□□□□□ -0.64
CLIP4-207ENST00000449202 MNX1P50219 401 aaPredicted RBP11.02□□□□□ -0.65
CLIP4-207ENST00000449202 PLEKHG5O94827 1062 aa11.01□□□□□ -0.65
CLIP4-207ENST00000449202 MIER1Q8N108 512 aa11.01□□□□□ -0.65
CLIP4-207ENST00000449202 NPM1P06748 294 aaKnown RBP eCLIP10.99□□□□□ -0.65
CLIP4-207ENST00000449202 SP7Q8TDD2 431 aaPredicted RBP10.99□□□□□ -0.65
CLIP4-207ENST00000449202 EVX2Q03828 476 aa10.98□□□□□ -0.65
CLIP4-207ENST00000449202 PLCD3Q8N3E9 789 aa10.97□□□□□ -0.65
CLIP4-207ENST00000449202 CD44P16070 742 aaKnown RBP10.96□□□□□ -0.65
CLIP4-207ENST00000449202 ZBTB47Q9UFB7 747 aaPredicted RBP10.92□□□□□ -0.66
CLIP4-207ENST00000449202 VASPP50552 380 aaPredicted RBP10.91□□□□□ -0.66
CLIP4-207ENST00000449202 PAK3O75914 559 aaPredicted RBP10.87□□□□□ -0.67
CLIP4-207ENST00000449202 ZNF579Q8NAF0 562 aaKnown RBP10.84□□□□□ -0.67
CLIP4-207ENST00000449202 ZRANB1Q9UGI0 708 aa10.84□□□□□ -0.67
CLIP4-207ENST00000449202 CLCN6P51797 869 aa10.81□□□□□ -0.68
CLIP4-207ENST00000449202 GABBR2O75899 941 aa10.78□□□□□ -0.68
CLIP4-207ENST00000449202 NUBP1P53384 320 aa10.77□□□□□ -0.69
CLIP4-207ENST00000449202 RASEFQ8IZ41 740 aa10.77□□□□□ -0.69
CLIP4-207ENST00000449202 TSPYL2Q9H2G4 693 aaPredicted RBP10.76□□□□□ -0.69
CLIP4-207ENST00000449202 KLHL34Q8N239 644 aa10.75□□□□□ -0.69
CLIP4-207ENST00000449202 IFNLR1Q8IU57 520 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms