RNA–Protein interactions for RNA: ENST00000447558.1

GCC2-205, Transcript of GRIP and coiled-coil domain containing 2, humanhuman

TSL 3

Gene GCC2, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCC2-205ENST00000447558 AEBP2Q6ZN18 517 aaPredicted RBP23.07■■□□□ 1.28
GCC2-205ENST00000447558 CHIC1Q5VXU3 224 aa21.79■■□□□ 1.08
GCC2-205ENST00000447558 SENP3Q9H4L4 574 aaPredicted RBP19.67■□□□□ 0.74
GCC2-205ENST00000447558 PHF23Q9BUL5 403 aaPredicted RBP19.41■□□□□ 0.7
GCC2-205ENST00000447558 FOXD1Q16676 465 aa18.36■□□□□ 0.53
GCC2-205ENST00000447558 PLPPR3Q6T4P5 718 aa17.35■□□□□ 0.37
GCC2-205ENST00000447558 MSH5O43196 834 aa17.21■□□□□ 0.35
GCC2-205ENST00000447558 PIAS4Q8N2W9 510 aaPredicted RBP17.12■□□□□ 0.33
GCC2-205ENST00000447558 PPP6R1Q9UPN7 881 aa17.1■□□□□ 0.33
GCC2-205ENST00000447558 ADRA2BP18089 450 aa17.03■□□□□ 0.32
GCC2-205ENST00000447558 POTEDQ86YR6 584 aa16.99■□□□□ 0.31
GCC2-205ENST00000447558 MAPK8IP2Q13387 824 aaPredicted RBP15.68■□□□□ 0.1
GCC2-205ENST00000447558 DMRT2Q9Y5R5 561 aa15.59■□□□□ 0.09
GCC2-205ENST00000447558 SCAF1Q9H7N4 1312 aaKnown RBP15.55■□□□□ 0.08
GCC2-205ENST00000447558 PPP4R3CPQ6ZMV5 832 aa15.2■□□□□ 0.02
GCC2-205ENST00000447558 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
GCC2-205ENST00000447558 DCAF8L1A6NGE4 600 aa14.94□□□□□ -0.02
GCC2-205ENST00000447558 CNKSR2Q8WXI2 1034 aa14.94□□□□□ -0.02
GCC2-205ENST00000447558 CACNB1Q02641 598 aaPredicted RBP14.83□□□□□ -0.04
GCC2-205ENST00000447558 RNF216Q9NWF9 866 aaPredicted RBP14.83□□□□□ -0.04
GCC2-205ENST00000447558 RNF39Q9H2S5 420 aa14.69□□□□□ -0.06
GCC2-205ENST00000447558 NCBP3Q53F19 620 aaKnown RBP14.57□□□□□ -0.08
GCC2-205ENST00000447558 DNAJC5BQ9UF47 199 aa14.48□□□□□ -0.09
GCC2-205ENST00000447558 C1QBPQ07021 282 aaKnown RBP14.46□□□□□ -0.09
GCC2-205ENST00000447558 NPM3O75607 178 aaKnown RBP14.38□□□□□ -0.11
GCC2-205ENST00000447558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.26□□□□□ -0.139e-8■□□□□ 10.2
GCC2-205ENST00000447558 KCNA4P22459 653 aa14.01□□□□□ -0.17
GCC2-205ENST00000447558 U3KPZ7 1027 aaPredicted RBP13.96□□□□□ -0.17
GCC2-205ENST00000447558 SPINK5Q9NQ38 1064 aaPredicted RBP13.8□□□□□ -0.2
GCC2-205ENST00000447558 SLC4A2P04920 1241 aa13.77□□□□□ -0.21
GCC2-205ENST00000447558 CAPN15O75808 1086 aa13.76□□□□□ -0.21
GCC2-205ENST00000447558 DSG3P32926 999 aa13.72□□□□□ -0.21
GCC2-205ENST00000447558 APLP2Q06481 763 aa13.53□□□□□ -0.24
GCC2-205ENST00000447558 TRHP20396 242 aaPredicted RBP13.52□□□□□ -0.25
GCC2-205ENST00000447558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.51□□□□□ -0.25
GCC2-205ENST00000447558 HNRNPUL2Q1KMD3 747 aaKnown RBP13.51□□□□□ -0.25
GCC2-205ENST00000447558 ZNF219Q9P2Y4 722 aaPredicted RBP13.49□□□□□ -0.25
GCC2-205ENST00000447558 ABCB7O75027 752 aa13.44□□□□□ -0.26
GCC2-205ENST00000447558 SAMD1Q6SPF0 538 aaPredicted RBP13.43□□□□□ -0.26
GCC2-205ENST00000447558 MYCNP04198 464 aaPredicted RBP13.3□□□□□ -0.28
GCC2-205ENST00000447558 POTEHQ6S545 545 aa13.29□□□□□ -0.28
GCC2-205ENST00000447558 SLC4A1APQ9BWU0 796 aaKnown RBP13.2□□□□□ -0.3
GCC2-205ENST00000447558 EHMT2Q96KQ7 1210 aa13.18□□□□□ -0.3
GCC2-205ENST00000447558 POLA2Q14181 598 aa13.13□□□□□ -0.31
GCC2-205ENST00000447558 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
GCC2-205ENST00000447558 RBM42Q9BTD8 480 aaKnown RBP13.07□□□□□ -0.32
GCC2-205ENST00000447558 ATF5Q9Y2D1 282 aaPredicted RBP13.01□□□□□ -0.33
GCC2-205ENST00000447558 ZBTB22O15209 634 aa12.9□□□□□ -0.34
GCC2-205ENST00000447558 ZBTB12Q9Y330 459 aaPredicted RBP12.85□□□□□ -0.35
GCC2-205ENST00000447558 CHRDL2Q6WN34 429 aa12.84□□□□□ -0.35
GCC2-205ENST00000447558 CSRNP3Q8WYN3 585 aa12.79□□□□□ -0.36
GCC2-205ENST00000447558 AKT1S1Q96B36 256 aa12.76□□□□□ -0.37
GCC2-205ENST00000447558 OSCARQ8IYS5 282 aa12.72□□□□□ -0.37
GCC2-205ENST00000447558 ATXN8OSP0DMR3 200 aa12.71□□□□□ -0.37
GCC2-205ENST00000447558 REM2Q8IYK8 340 aaPredicted RBP12.65□□□□□ -0.38
GCC2-205ENST00000447558 PITPNM1O00562 1244 aa12.52□□□□□ -0.41
GCC2-205ENST00000447558 PIP4P2Q8N4L2 257 aa12.52□□□□□ -0.41
GCC2-205ENST00000447558 FBLN2P98095 1184 aa12.48□□□□□ -0.41
GCC2-205ENST00000447558 SPDYE2BA6NHP3 402 aa12.45□□□□□ -0.42
GCC2-205ENST00000447558 SPDYE6P0CI01 402 aa12.45□□□□□ -0.42
GCC2-205ENST00000447558 SPDYE2Q495Y8 402 aa12.45□□□□□ -0.42
GCC2-205ENST00000447558 FXR2P51116 673 aaKnown RBP eCLIP12.43□□□□□ -0.426e-6■□□□□ 10
GCC2-205ENST00000447558 MKRN4PQ13434 485 aaPredicted RBP12.41□□□□□ -0.42
GCC2-205ENST00000447558 SP7Q8TDD2 431 aaPredicted RBP12.41□□□□□ -0.42
GCC2-205ENST00000447558 HAX1O00165 279 aa12.31□□□□□ -0.44
GCC2-205ENST00000447558 SSUH2Q9Y2M2 353 aa12.29□□□□□ -0.44
GCC2-205ENST00000447558 ZNF692Q9BU19 519 aaPredicted RBP12.28□□□□□ -0.44
GCC2-205ENST00000447558 SPDYE1Q8NFV5 336 aaPredicted RBP12.26□□□□□ -0.45
GCC2-205ENST00000447558 CLEC11AQ9Y240 323 aa12.24□□□□□ -0.45
GCC2-205ENST00000447558 PRKAR2AP13861 404 aaKnown RBP12.19□□□□□ -0.46
GCC2-205ENST00000447558 EVX2Q03828 476 aa12.17□□□□□ -0.46
GCC2-205ENST00000447558 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
GCC2-205ENST00000447558 C19orf67A6NJJ6 358 aa12.03□□□□□ -0.48
GCC2-205ENST00000447558 CHADLQ6NUI6 762 aa12.03□□□□□ -0.48
GCC2-205ENST00000447558 PRR29P0C7W0 189 aa12.02□□□□□ -0.49
GCC2-205ENST00000447558 GABBR2O75899 941 aa11.88□□□□□ -0.51
GCC2-205ENST00000447558 FARP1Q9Y4F1 1045 aaPredicted RBP11.84□□□□□ -0.51
GCC2-205ENST00000447558 CD44P16070 742 aaKnown RBP11.79□□□□□ -0.52
GCC2-205ENST00000447558 SPDYE4A6NLX3 237 aa11.76□□□□□ -0.53
GCC2-205ENST00000447558 STAG3Q9UJ98 1225 aa11.74□□□□□ -0.53
GCC2-205ENST00000447558 CREBZFQ9NS37 354 aa11.72□□□□□ -0.53
GCC2-205ENST00000447558 POTEIP0CG38 1075 aa11.64□□□□□ -0.55
GCC2-205ENST00000447558 CLCN6P51797 869 aa11.64□□□□□ -0.55
GCC2-205ENST00000447558 LHX8Q68G74 356 aa11.63□□□□□ -0.55
GCC2-205ENST00000447558 ZNF579Q8NAF0 562 aaKnown RBP11.61□□□□□ -0.55
GCC2-205ENST00000447558 ZRANB1Q9UGI0 708 aa11.61□□□□□ -0.55
GCC2-205ENST00000447558 FKBP8Q14318 412 aa11.6□□□□□ -0.55
GCC2-205ENST00000447558 DCBLD2Q96PD2 775 aa11.52□□□□□ -0.57
GCC2-205ENST00000447558 MNX1P50219 401 aaPredicted RBP11.51□□□□□ -0.57
GCC2-205ENST00000447558 GALR2O43603 387 aaPredicted RBP11.48□□□□□ -0.57
GCC2-205ENST00000447558 NPM1P06748 294 aaKnown RBP eCLIP11.48□□□□□ -0.57
GCC2-205ENST00000447558 PAK3O75914 559 aaPredicted RBP11.47□□□□□ -0.57
GCC2-205ENST00000447558 PROM2Q8N271 834 aa11.47□□□□□ -0.57
GCC2-205ENST00000447558 PHF12Q96QT6 1004 aa11.45□□□□□ -0.58
GCC2-205ENST00000447558 AMER1Q5JTC6 1135 aaPredicted RBP11.34□□□□□ -0.59
GCC2-205ENST00000447558 MS4A3Q96HJ5 214 aa11.29□□□□□ -0.6
GCC2-205ENST00000447558 TSPYL2Q9H2G4 693 aaPredicted RBP11.28□□□□□ -0.6
GCC2-205ENST00000447558 PELP1Q8IZL8 1130 aaKnown RBP11.27□□□□□ -0.61
GCC2-205ENST00000447558 POTEB2H3BUK9 544 aa11.25□□□□□ -0.61
GCC2-205ENST00000447558 CCDC61Q9Y6R9 512 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms