RNA–Protein interactions for RNA: ENST00000446731.2

MSRB3-203, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-203ENST00000446731 AEBP2Q6ZN18 517 aaPredicted RBP25.19■■□□□ 1.62
MSRB3-203ENST00000446731 CHIC1Q5VXU3 224 aa24.68■■□□□ 1.54
MSRB3-203ENST00000446731 PHF23Q9BUL5 403 aaPredicted RBP21.79■■□□□ 1.08
MSRB3-203ENST00000446731 SENP3Q9H4L4 574 aaPredicted RBP21.22■□□□□ 0.99
MSRB3-203ENST00000446731 PLPPR3Q6T4P5 718 aa20.06■□□□□ 0.8
MSRB3-203ENST00000446731 FOXD1Q16676 465 aa19.76■□□□□ 0.75
MSRB3-203ENST00000446731 PPP6R1Q9UPN7 881 aa19.18■□□□□ 0.66
MSRB3-203ENST00000446731 ADRA2BP18089 450 aa19.15■□□□□ 0.66
MSRB3-203ENST00000446731 PIAS4Q8N2W9 510 aaPredicted RBP18.63■□□□□ 0.57
MSRB3-203ENST00000446731 MSH5O43196 834 aa18.06■□□□□ 0.48
MSRB3-203ENST00000446731 PPP4R3CPQ6ZMV5 832 aa17.73■□□□□ 0.43
MSRB3-203ENST00000446731 KCNA4P22459 653 aa17.56■□□□□ 0.4
MSRB3-203ENST00000446731 SCAF1Q9H7N4 1312 aaKnown RBP17.37■□□□□ 0.37
MSRB3-203ENST00000446731 MAPK8IP2Q13387 824 aaPredicted RBP17.35■□□□□ 0.37
MSRB3-203ENST00000446731 NCBP3Q53F19 620 aaKnown RBP17.24■□□□□ 0.35
MSRB3-203ENST00000446731 CNKSR2Q8WXI2 1034 aa17.17■□□□□ 0.34
MSRB3-203ENST00000446731 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
MSRB3-203ENST00000446731 NPM3O75607 178 aaKnown RBP17.09■□□□□ 0.33
MSRB3-203ENST00000446731 DMRT2Q9Y5R5 561 aa17.01■□□□□ 0.31
MSRB3-203ENST00000446731 RNF216Q9NWF9 866 aaPredicted RBP16.8■□□□□ 0.28
MSRB3-203ENST00000446731 HOXD11P31277 338 aaPredicted RBP16.71■□□□□ 0.27
MSRB3-203ENST00000446731 SLC4A1APQ9BWU0 796 aaKnown RBP16.7■□□□□ 0.26
MSRB3-203ENST00000446731 DNAJC5BQ9UF47 199 aa16.51■□□□□ 0.23
MSRB3-203ENST00000446731 EHMT2Q96KQ7 1210 aa16.45■□□□□ 0.22
MSRB3-203ENST00000446731 DCAF8L1A6NGE4 600 aa16.25■□□□□ 0.19
MSRB3-203ENST00000446731 ZBTB22O15209 634 aa16.21■□□□□ 0.19
MSRB3-203ENST00000446731 CSRNP3Q8WYN3 585 aa16.19■□□□□ 0.18
MSRB3-203ENST00000446731 SLC4A2P04920 1241 aa16.13■□□□□ 0.17
MSRB3-203ENST00000446731 FOXD4L1Q9NU39 408 aa16.05■□□□□ 0.16
MSRB3-203ENST00000446731 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.9■□□□□ 0.14
MSRB3-203ENST00000446731 MYCNP04198 464 aaPredicted RBP15.73■□□□□ 0.11
MSRB3-203ENST00000446731 U3KPZ7 1027 aaPredicted RBP15.73■□□□□ 0.11
MSRB3-203ENST00000446731 RNF39Q9H2S5 420 aa15.55■□□□□ 0.08
MSRB3-203ENST00000446731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.44■□□□□ 0.06
MSRB3-203ENST00000446731 ATXN8OSP0DMR3 200 aa15.44■□□□□ 0.06
MSRB3-203ENST00000446731 HNRNPUL2Q1KMD3 747 aaKnown RBP15.44■□□□□ 0.06
MSRB3-203ENST00000446731 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
MSRB3-203ENST00000446731 ATF5Q9Y2D1 282 aaPredicted RBP15.41■□□□□ 0.06
MSRB3-203ENST00000446731 CACNB1Q02641 598 aaPredicted RBP15.33■□□□□ 0.04
MSRB3-203ENST00000446731 C1QBPQ07021 282 aaKnown RBP15.31■□□□□ 0.04
MSRB3-203ENST00000446731 SPINK5Q9NQ38 1064 aaPredicted RBP15.26■□□□□ 0.03
MSRB3-203ENST00000446731 APLP2Q06481 763 aa15.22■□□□□ 0.03
MSRB3-203ENST00000446731 CAPN15O75808 1086 aa15.12■□□□□ 0.01
MSRB3-203ENST00000446731 TRHP20396 242 aaPredicted RBP15.1■□□□□ 0.01
MSRB3-203ENST00000446731 ZNF219Q9P2Y4 722 aaPredicted RBP15.08■□□□□ 0
MSRB3-203ENST00000446731 ABCB7O75027 752 aa14.9□□□□□ -0.02
MSRB3-203ENST00000446731 POLA2Q14181 598 aa14.89□□□□□ -0.03
MSRB3-203ENST00000446731 DSG3P32926 999 aa14.86□□□□□ -0.03
MSRB3-203ENST00000446731 MKRN4PQ13434 485 aaPredicted RBP14.74□□□□□ -0.05
MSRB3-203ENST00000446731 FBLN2P98095 1184 aa14.61□□□□□ -0.07
MSRB3-203ENST00000446731 FKBP8Q14318 412 aa14.6□□□□□ -0.07
MSRB3-203ENST00000446731 ZBTB12Q9Y330 459 aaPredicted RBP14.58□□□□□ -0.08
MSRB3-203ENST00000446731 SPDYE4A6NLX3 237 aa14.42□□□□□ -0.1
MSRB3-203ENST00000446731 OSCARQ8IYS5 282 aa14.41□□□□□ -0.1
MSRB3-203ENST00000446731 SPDYE2BA6NHP3 402 aa14.24□□□□□ -0.13
MSRB3-203ENST00000446731 SPDYE6P0CI01 402 aa14.24□□□□□ -0.13
MSRB3-203ENST00000446731 SPDYE2Q495Y8 402 aa14.24□□□□□ -0.13
MSRB3-203ENST00000446731 ZNF692Q9BU19 519 aaPredicted RBP14.23□□□□□ -0.13
MSRB3-203ENST00000446731 PROM2Q8N271 834 aa14.22□□□□□ -0.13
MSRB3-203ENST00000446731 SSUH2Q9Y2M2 353 aa14.19□□□□□ -0.14
MSRB3-203ENST00000446731 PABPN1Q86U42 306 aaKnown RBP eCLIP14.07□□□□□ -0.16
MSRB3-203ENST00000446731 RBM42Q9BTD8 480 aaKnown RBP14.06□□□□□ -0.16
MSRB3-203ENST00000446731 AKT1S1Q96B36 256 aa13.97□□□□□ -0.17
MSRB3-203ENST00000446731 FBXO3Q9UK99 471 aa13.94□□□□□ -0.18
MSRB3-203ENST00000446731 REM2Q8IYK8 340 aaPredicted RBP13.87□□□□□ -0.19
MSRB3-203ENST00000446731 VASPP50552 380 aaPredicted RBP13.84□□□□□ -0.19
MSRB3-203ENST00000446731 SPDYE1Q8NFV5 336 aaPredicted RBP13.77□□□□□ -0.21
MSRB3-203ENST00000446731 STAG3Q9UJ98 1225 aa13.77□□□□□ -0.21
MSRB3-203ENST00000446731 PITPNM1O00562 1244 aa13.74□□□□□ -0.21
MSRB3-203ENST00000446731 CLEC11AQ9Y240 323 aa13.74□□□□□ -0.21
MSRB3-203ENST00000446731 IFNLR1Q8IU57 520 aaPredicted RBP13.68□□□□□ -0.22
MSRB3-203ENST00000446731 MIER1Q8N108 512 aa13.62□□□□□ -0.23
MSRB3-203ENST00000446731 PRR29P0C7W0 189 aa13.61□□□□□ -0.23
MSRB3-203ENST00000446731 PLCD3Q8N3E9 789 aa13.61□□□□□ -0.23
MSRB3-203ENST00000446731 RTN4Q9NQC3 1192 aaKnown RBP13.6□□□□□ -0.23
MSRB3-203ENST00000446731 CREBZFQ9NS37 354 aa13.55□□□□□ -0.24
MSRB3-203ENST00000446731 AMER1Q5JTC6 1135 aaPredicted RBP13.52□□□□□ -0.25
MSRB3-203ENST00000446731 KLHL34Q8N239 644 aa13.52□□□□□ -0.25
MSRB3-203ENST00000446731 POTEHQ6S545 545 aa13.48□□□□□ -0.25
MSRB3-203ENST00000446731 CHRDL2Q6WN34 429 aa13.48□□□□□ -0.25
MSRB3-203ENST00000446731 PLEKHG5O94827 1062 aa13.45□□□□□ -0.26
MSRB3-203ENST00000446731 CHADLQ6NUI6 762 aa13.44□□□□□ -0.26
MSRB3-203ENST00000446731 SPOCK2Q92563 424 aa13.44□□□□□ -0.26
MSRB3-203ENST00000446731 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
MSRB3-203ENST00000446731 FXR2P51116 673 aaKnown RBP eCLIP13.42□□□□□ -0.26
MSRB3-203ENST00000446731 ZBTB47Q9UFB7 747 aaPredicted RBP13.39□□□□□ -0.27
MSRB3-203ENST00000446731 PIP4P2Q8N4L2 257 aa13.38□□□□□ -0.27
MSRB3-203ENST00000446731 PRKAR2AP13861 404 aaKnown RBP13.36□□□□□ -0.27
MSRB3-203ENST00000446731 NUBP1P53384 320 aa13.32□□□□□ -0.28
MSRB3-203ENST00000446731 PKD2Q13563 968 aa13.3□□□□□ -0.28
MSRB3-203ENST00000446731 FARP1Q9Y4F1 1045 aaPredicted RBP13.29□□□□□ -0.28
MSRB3-203ENST00000446731 RASEFQ8IZ41 740 aa13.24□□□□□ -0.29
MSRB3-203ENST00000446731 NPM1P06748 294 aaKnown RBP eCLIP13.22□□□□□ -0.29
MSRB3-203ENST00000446731 CIZ1Q9ULV3 898 aaPredicted RBP13.21□□□□□ -0.29
MSRB3-203ENST00000446731 DCAF8Q5TAQ9 597 aa13.15□□□□□ -0.3
MSRB3-203ENST00000446731 ECM2O94769 699 aaPredicted RBP13.14□□□□□ -0.31
MSRB3-203ENST00000446731 FAM212AQ96EL1 285 aa13.14□□□□□ -0.31
MSRB3-203ENST00000446731 GSE1Q14687 1217 aa13.12□□□□□ -0.31
MSRB3-203ENST00000446731 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
MSRB3-203ENST00000446731 RGL2O15211 777 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms