RNA–Protein interactions for RNA: ENST00000445969.1

GBP3-204, Transcript of guanylate binding protein 3, humanhuman

TSL 2

Gene GBP3, Length 411 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-204ENST00000445969 CHIC1Q5VXU3 224 aa26■■□□□ 1.75
GBP3-204ENST00000445969 AEBP2Q6ZN18 517 aaPredicted RBP25.98■■□□□ 1.75
GBP3-204ENST00000445969 PHF23Q9BUL5 403 aaPredicted RBP22.9■■□□□ 1.26
GBP3-204ENST00000445969 SENP3Q9H4L4 574 aaPredicted RBP22.01■■□□□ 1.11
GBP3-204ENST00000445969 PLPPR3Q6T4P5 718 aa21.42■■□□□ 1.02
GBP3-204ENST00000445969 FOXD1Q16676 465 aa20.33■□□□□ 0.85
GBP3-204ENST00000445969 ADRA2BP18089 450 aa20.07■□□□□ 0.8
GBP3-204ENST00000445969 PPP6R1Q9UPN7 881 aa20.01■□□□□ 0.79
GBP3-204ENST00000445969 PIAS4Q8N2W9 510 aaPredicted RBP19.38■□□□□ 0.69
GBP3-204ENST00000445969 KCNA4P22459 653 aa19.18■□□□□ 0.66
GBP3-204ENST00000445969 PPP4R3CPQ6ZMV5 832 aa18.95■□□□□ 0.62
GBP3-204ENST00000445969 NCBP3Q53F19 620 aaKnown RBP18.66■□□□□ 0.58
GBP3-204ENST00000445969 MSH5O43196 834 aa18.64■□□□□ 0.57
GBP3-204ENST00000445969 EHMT2Q96KQ7 1210 aa18.64■□□□□ 0.57
GBP3-204ENST00000445969 SLC4A1APQ9BWU0 796 aaKnown RBP18.42■□□□□ 0.54
GBP3-204ENST00000445969 SCAF1Q9H7N4 1312 aaKnown RBP18.41■□□□□ 0.54
GBP3-204ENST00000445969 NPM3O75607 178 aaKnown RBP18.34■□□□□ 0.53
GBP3-204ENST00000445969 CNKSR2Q8WXI2 1034 aa18.28■□□□□ 0.52
GBP3-204ENST00000445969 CSRNP3Q8WYN3 585 aa18.04■□□□□ 0.48
GBP3-204ENST00000445969 MAPK8IP2Q13387 824 aaPredicted RBP18.03■□□□□ 0.48
GBP3-204ENST00000445969 POTEDQ86YR6 584 aa17.83■□□□□ 0.44
GBP3-204ENST00000445969 RNF216Q9NWF9 866 aaPredicted RBP17.76■□□□□ 0.43
GBP3-204ENST00000445969 DMRT2Q9Y5R5 561 aa17.64■□□□□ 0.41
GBP3-204ENST00000445969 ZBTB22O15209 634 aa17.63■□□□□ 0.41
GBP3-204ENST00000445969 DNAJC5BQ9UF47 199 aa17.6■□□□□ 0.41
GBP3-204ENST00000445969 FOXD4L1Q9NU39 408 aa17.5■□□□□ 0.39
GBP3-204ENST00000445969 HOXD11P31277 338 aaPredicted RBP17.49■□□□□ 0.39
GBP3-204ENST00000445969 SLC4A2P04920 1241 aa17.13■□□□□ 0.33
GBP3-204ENST00000445969 DCAF8L1A6NGE4 600 aa16.98■□□□□ 0.31
GBP3-204ENST00000445969 MYCNP04198 464 aaPredicted RBP16.96■□□□□ 0.31
GBP3-204ENST00000445969 ATXN8OSP0DMR3 200 aa16.8■□□□□ 0.28
GBP3-204ENST00000445969 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.78■□□□□ 0.28
GBP3-204ENST00000445969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.56■□□□□ 0.24
GBP3-204ENST00000445969 HNRNPUL2Q1KMD3 747 aaKnown RBP16.56■□□□□ 0.24
GBP3-204ENST00000445969 SAMD1Q6SPF0 538 aaPredicted RBP16.52■□□□□ 0.24
GBP3-204ENST00000445969 U3KPZ7 1027 aaPredicted RBP16.5■□□□□ 0.23
GBP3-204ENST00000445969 ATF5Q9Y2D1 282 aaPredicted RBP16.42■□□□□ 0.22
GBP3-204ENST00000445969 FKBP8Q14318 412 aa16.34■□□□□ 0.21
GBP3-204ENST00000445969 APLP2Q06481 763 aa16.26■□□□□ 0.19
GBP3-204ENST00000445969 ZNF219Q9P2Y4 722 aaPredicted RBP16.13■□□□□ 0.17
GBP3-204ENST00000445969 AMER1Q5JTC6 1135 aaPredicted RBP15.95■□□□□ 0.14
GBP3-204ENST00000445969 TRHP20396 242 aaPredicted RBP15.92■□□□□ 0.14
GBP3-204ENST00000445969 RNF39Q9H2S5 420 aa15.91■□□□□ 0.14
GBP3-204ENST00000445969 RTN4Q9NQC3 1192 aaKnown RBP15.9■□□□□ 0.14
GBP3-204ENST00000445969 SPINK5Q9NQ38 1064 aaPredicted RBP15.88■□□□□ 0.13
GBP3-204ENST00000445969 CAPN15O75808 1086 aa15.85■□□□□ 0.13
GBP3-204ENST00000445969 CACNB1Q02641 598 aaPredicted RBP15.85■□□□□ 0.13
GBP3-204ENST00000445969 C1QBPQ07021 282 aaKnown RBP15.78■□□□□ 0.12
GBP3-204ENST00000445969 FBLN2P98095 1184 aa15.77■□□□□ 0.12
GBP3-204ENST00000445969 POLA2Q14181 598 aa15.76■□□□□ 0.11
GBP3-204ENST00000445969 SPDYE4A6NLX3 237 aa15.73■□□□□ 0.11
GBP3-204ENST00000445969 MKRN4PQ13434 485 aaPredicted RBP15.72■□□□□ 0.11
GBP3-204ENST00000445969 FBXO3Q9UK99 471 aa15.6■□□□□ 0.09
GBP3-204ENST00000445969 ABCB7O75027 752 aa15.59■□□□□ 0.09
GBP3-204ENST00000445969 ZBTB12Q9Y330 459 aaPredicted RBP15.56■□□□□ 0.08
GBP3-204ENST00000445969 PROM2Q8N271 834 aa15.45■□□□□ 0.06
GBP3-204ENST00000445969 SLC24A1O60721 1099 aa15.39■□□□□ 0.05
GBP3-204ENST00000445969 DSG3P32926 999 aa15.36■□□□□ 0.05
GBP3-204ENST00000445969 VASPP50552 380 aaPredicted RBP15.34■□□□□ 0.05
GBP3-204ENST00000445969 ZNF692Q9BU19 519 aaPredicted RBP15.24■□□□□ 0.03
GBP3-204ENST00000445969 OSCARQ8IYS5 282 aa15.21■□□□□ 0.03
GBP3-204ENST00000445969 SPDYE2BA6NHP3 402 aa15.16■□□□□ 0.02
GBP3-204ENST00000445969 SPDYE6P0CI01 402 aa15.16■□□□□ 0.02
GBP3-204ENST00000445969 SPDYE2Q495Y8 402 aa15.16■□□□□ 0.02
GBP3-204ENST00000445969 IFNLR1Q8IU57 520 aaPredicted RBP15.16■□□□□ 0.02
GBP3-204ENST00000445969 SSUH2Q9Y2M2 353 aa15.07■□□□□ 0
GBP3-204ENST00000445969 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ -0
GBP3-204ENST00000445969 STAG3Q9UJ98 1225 aa15.03■□□□□ -0
GBP3-204ENST00000445969 KLHL34Q8N239 644 aa15.02■□□□□ -0
GBP3-204ENST00000445969 PLCD3Q8N3E9 789 aa14.96□□□□□ -0.01
GBP3-204ENST00000445969 DCAF8L2P0C7V8 631 aa14.95□□□□□ -0.02
GBP3-204ENST00000445969 SPOCK2Q92563 424 aa14.91□□□□□ -0.02
GBP3-204ENST00000445969 MIER1Q8N108 512 aa14.89□□□□□ -0.03
GBP3-204ENST00000445969 PKD2Q13563 968 aa14.87□□□□□ -0.03
GBP3-204ENST00000445969 PLEKHG5O94827 1062 aa14.82□□□□□ -0.04
GBP3-204ENST00000445969 ECM2O94769 699 aaPredicted RBP14.75□□□□□ -0.05
GBP3-204ENST00000445969 ZBTB47Q9UFB7 747 aaPredicted RBP14.73□□□□□ -0.05
GBP3-204ENST00000445969 PLCB2Q00722 1185 aa14.72□□□□□ -0.05
GBP3-204ENST00000445969 RBM42Q9BTD8 480 aaKnown RBP14.67□□□□□ -0.06
GBP3-204ENST00000445969 CIZ1Q9ULV3 898 aaPredicted RBP14.63□□□□□ -0.07
GBP3-204ENST00000445969 SPDYE1Q8NFV5 336 aaPredicted RBP14.59□□□□□ -0.07
GBP3-204ENST00000445969 AKT1S1Q96B36 256 aa14.59□□□□□ -0.07
GBP3-204ENST00000445969 HAP1P54257 671 aaPredicted RBP14.58□□□□□ -0.08
GBP3-204ENST00000445969 CLEC11AQ9Y240 323 aa14.55□□□□□ -0.08
GBP3-204ENST00000445969 RGL2O15211 777 aa14.53□□□□□ -0.08
GBP3-204ENST00000445969 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.52□□□□□ -0.09
GBP3-204ENST00000445969 BBXQ8WY36 941 aaPredicted RBP14.49□□□□□ -0.09
GBP3-204ENST00000445969 PRR29P0C7W0 189 aa14.48□□□□□ -0.09
GBP3-204ENST00000445969 REM2Q8IYK8 340 aaPredicted RBP14.45□□□□□ -0.1
GBP3-204ENST00000445969 TRIM41Q8WV44 630 aa14.45□□□□□ -0.1
GBP3-204ENST00000445969 NPM1P06748 294 aaKnown RBP eCLIP14.43□□□□□ -0.1
GBP3-204ENST00000445969 GSE1Q14687 1217 aa14.43□□□□□ -0.1
GBP3-204ENST00000445969 PAXIP1Q6ZW49 1069 aaPredicted RBP14.39□□□□□ -0.11
GBP3-204ENST00000445969 CFAP44Q96MT7 982 aa14.38□□□□□ -0.11
GBP3-204ENST00000445969 CHGAP10645 457 aaKnown RBP14.37□□□□□ -0.11
GBP3-204ENST00000445969 DCAF8Q5TAQ9 597 aa14.37□□□□□ -0.11
GBP3-204ENST00000445969 CREBZFQ9NS37 354 aa14.37□□□□□ -0.11
GBP3-204ENST00000445969 NUBP1P53384 320 aa14.36□□□□□ -0.11
GBP3-204ENST00000445969 FAM212AQ96EL1 285 aa14.31□□□□□ -0.12
GBP3-204ENST00000445969 VSIG10Q8N0Z9 540 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms