RNA–Protein interactions for RNA: ENST00000445697.1

CHL1-206, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 5

Gene CHL1, Length 1,104 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-206ENST00000445697 AEBP2Q6ZN18 517 aaPredicted RBP23.29■■□□□ 1.32
CHL1-206ENST00000445697 CHIC1Q5VXU3 224 aa22.45■■□□□ 1.18
CHL1-206ENST00000445697 SENP3Q9H4L4 574 aaPredicted RBP20.07■□□□□ 0.8
CHL1-206ENST00000445697 PHF23Q9BUL5 403 aaPredicted RBP19.74■□□□□ 0.75
CHL1-206ENST00000445697 FOXD1Q16676 465 aa18.53■□□□□ 0.56
CHL1-206ENST00000445697 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
CHL1-206ENST00000445697 MSH5O43196 834 aa17.46■□□□□ 0.39
CHL1-206ENST00000445697 PIAS4Q8N2W9 510 aaPredicted RBP17.45■□□□□ 0.38
CHL1-206ENST00000445697 ADRA2BP18089 450 aa17.4■□□□□ 0.38
CHL1-206ENST00000445697 PPP6R1Q9UPN7 881 aa17.39■□□□□ 0.37
CHL1-206ENST00000445697 POTEDQ86YR6 584 aa16.54■□□□□ 0.24
CHL1-206ENST00000445697 SCAF1Q9H7N4 1312 aaKnown RBP16.2■□□□□ 0.18
CHL1-206ENST00000445697 DMRT2Q9Y5R5 561 aa15.89■□□□□ 0.13
CHL1-206ENST00000445697 MAPK8IP2Q13387 824 aaPredicted RBP15.88■□□□□ 0.13
CHL1-206ENST00000445697 PPP4R3CPQ6ZMV5 832 aa15.84■□□□□ 0.13
CHL1-206ENST00000445697 CNKSR2Q8WXI2 1034 aa15.56■□□□□ 0.08
CHL1-206ENST00000445697 NCBP3Q53F19 620 aaKnown RBP15.45■□□□□ 0.06
CHL1-206ENST00000445697 HOXD11P31277 338 aaPredicted RBP15.37■□□□□ 0.05
CHL1-206ENST00000445697 RNF216Q9NWF9 866 aaPredicted RBP15.36■□□□□ 0.05
CHL1-206ENST00000445697 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
CHL1-206ENST00000445697 NPM3O75607 178 aaKnown RBP15.02■□□□□ -0
CHL1-206ENST00000445697 DNAJC5BQ9UF47 199 aa14.92□□□□□ -0.02
CHL1-206ENST00000445697 KCNA4P22459 653 aa14.87□□□□□ -0.03
CHL1-206ENST00000445697 CACNB1Q02641 598 aaPredicted RBP14.82□□□□□ -0.04
CHL1-206ENST00000445697 RNF39Q9H2S5 420 aa14.8□□□□□ -0.04
CHL1-206ENST00000445697 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.73□□□□□ -0.05
CHL1-206ENST00000445697 C1QBPQ07021 282 aaKnown RBP14.7□□□□□ -0.06
CHL1-206ENST00000445697 U3KPZ7 1027 aaPredicted RBP14.31□□□□□ -0.12
CHL1-206ENST00000445697 APLP2Q06481 763 aa14.25□□□□□ -0.13
CHL1-206ENST00000445697 SLC4A2P04920 1241 aa14.24□□□□□ -0.13
CHL1-206ENST00000445697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.23□□□□□ -0.13
CHL1-206ENST00000445697 HNRNPUL2Q1KMD3 747 aaKnown RBP14.23□□□□□ -0.13
CHL1-206ENST00000445697 SLC4A1APQ9BWU0 796 aaKnown RBP14.19□□□□□ -0.14
CHL1-206ENST00000445697 CAPN15O75808 1086 aa14.11□□□□□ -0.15
CHL1-206ENST00000445697 SAMD1Q6SPF0 538 aaPredicted RBP14.1□□□□□ -0.15
CHL1-206ENST00000445697 SPINK5Q9NQ38 1064 aaPredicted RBP14.01□□□□□ -0.17
CHL1-206ENST00000445697 MYCNP04198 464 aaPredicted RBP14□□□□□ -0.17
CHL1-206ENST00000445697 ZNF219Q9P2Y4 722 aaPredicted RBP13.99□□□□□ -0.17
CHL1-206ENST00000445697 FOXD4L1Q9NU39 408 aa13.94□□□□□ -0.18
CHL1-206ENST00000445697 TRHP20396 242 aaPredicted RBP13.91□□□□□ -0.18
CHL1-206ENST00000445697 DSG3P32926 999 aa13.91□□□□□ -0.18
CHL1-206ENST00000445697 ABCB7O75027 752 aa13.72□□□□□ -0.21
CHL1-206ENST00000445697 ZBTB22O15209 634 aa13.59□□□□□ -0.23
CHL1-206ENST00000445697 POLA2Q14181 598 aa13.57□□□□□ -0.24
CHL1-206ENST00000445697 ATXN8OSP0DMR3 200 aa13.55□□□□□ -0.24
CHL1-206ENST00000445697 ZBTB12Q9Y330 459 aaPredicted RBP13.49□□□□□ -0.25
CHL1-206ENST00000445697 RBM42Q9BTD8 480 aaKnown RBP13.45□□□□□ -0.26
CHL1-206ENST00000445697 ATF5Q9Y2D1 282 aaPredicted RBP13.45□□□□□ -0.26
CHL1-206ENST00000445697 CSRNP3Q8WYN3 585 aa13.21□□□□□ -0.29
CHL1-206ENST00000445697 FBLN2P98095 1184 aa13.2□□□□□ -0.3
CHL1-206ENST00000445697 EHMT2Q96KQ7 1210 aa13.19□□□□□ -0.3
CHL1-206ENST00000445697 AKT1S1Q96B36 256 aa13.11□□□□□ -0.31
CHL1-206ENST00000445697 OSCARQ8IYS5 282 aa13.09□□□□□ -0.31
CHL1-206ENST00000445697 POTEHQ6S545 545 aa13.05□□□□□ -0.32
CHL1-206ENST00000445697 SPDYE2BA6NHP3 402 aa12.99□□□□□ -0.33
CHL1-206ENST00000445697 SPDYE6P0CI01 402 aa12.99□□□□□ -0.33
CHL1-206ENST00000445697 SPDYE2Q495Y8 402 aa12.99□□□□□ -0.33
CHL1-206ENST00000445697 CHRDL2Q6WN34 429 aa12.96□□□□□ -0.33
CHL1-206ENST00000445697 REM2Q8IYK8 340 aaPredicted RBP12.91□□□□□ -0.34
CHL1-206ENST00000445697 MKRN4PQ13434 485 aaPredicted RBP12.87□□□□□ -0.35
CHL1-206ENST00000445697 ZNF692Q9BU19 519 aaPredicted RBP12.85□□□□□ -0.35
CHL1-206ENST00000445697 SSUH2Q9Y2M2 353 aa12.76□□□□□ -0.37
CHL1-206ENST00000445697 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
CHL1-206ENST00000445697 SPDYE1Q8NFV5 336 aaPredicted RBP12.74□□□□□ -0.37
CHL1-206ENST00000445697 CLEC11AQ9Y240 323 aa12.65□□□□□ -0.38
CHL1-206ENST00000445697 PIP4P2Q8N4L2 257 aa12.64□□□□□ -0.39
CHL1-206ENST00000445697 PABPN1Q86U42 306 aaKnown RBP eCLIP12.62□□□□□ -0.39
CHL1-206ENST00000445697 FXR2P51116 673 aaKnown RBP eCLIP12.61□□□□□ -0.39
CHL1-206ENST00000445697 SPDYE4A6NLX3 237 aa12.51□□□□□ -0.41
CHL1-206ENST00000445697 PRR29P0C7W0 189 aa12.51□□□□□ -0.41
CHL1-206ENST00000445697 PRKAR2AP13861 404 aaKnown RBP12.46□□□□□ -0.41
CHL1-206ENST00000445697 STAG3Q9UJ98 1225 aa12.46□□□□□ -0.41
CHL1-206ENST00000445697 HAX1O00165 279 aa12.44□□□□□ -0.42
CHL1-206ENST00000445697 SP7Q8TDD2 431 aaPredicted RBP12.35□□□□□ -0.43
CHL1-206ENST00000445697 CHADLQ6NUI6 762 aa12.27□□□□□ -0.45
CHL1-206ENST00000445697 C19orf67A6NJJ6 358 aa12.2□□□□□ -0.46
CHL1-206ENST00000445697 FARP1Q9Y4F1 1045 aaPredicted RBP12.2□□□□□ -0.46
CHL1-206ENST00000445697 PROM2Q8N271 834 aa12.17□□□□□ -0.46
CHL1-206ENST00000445697 CREBZFQ9NS37 354 aa12.12□□□□□ -0.47
CHL1-206ENST00000445697 PLEKHG5O94827 1062 aa12.1□□□□□ -0.47
CHL1-206ENST00000445697 NPM1P06748 294 aaKnown RBP eCLIP12.1□□□□□ -0.47
CHL1-206ENST00000445697 CD44P16070 742 aaKnown RBP12.1□□□□□ -0.47
CHL1-206ENST00000445697 EVX2Q03828 476 aa12.09□□□□□ -0.47
CHL1-206ENST00000445697 CLCN6P51797 869 aa12.07□□□□□ -0.48
CHL1-206ENST00000445697 PAK3O75914 559 aaPredicted RBP12.05□□□□□ -0.48
CHL1-206ENST00000445697 FKBP8Q14318 412 aa12.05□□□□□ -0.48
CHL1-206ENST00000445697 GABBR2O75899 941 aa11.97□□□□□ -0.49
CHL1-206ENST00000445697 ZRANB1Q9UGI0 708 aa11.96□□□□□ -0.49
CHL1-206ENST00000445697 MIER1Q8N108 512 aa11.94□□□□□ -0.5
CHL1-206ENST00000445697 ZNF579Q8NAF0 562 aaKnown RBP11.92□□□□□ -0.5
CHL1-206ENST00000445697 FBXO3Q9UK99 471 aa11.92□□□□□ -0.5
CHL1-206ENST00000445697 PLCD3Q8N3E9 789 aa11.91□□□□□ -0.5
CHL1-206ENST00000445697 ZBTB47Q9UFB7 747 aaPredicted RBP11.91□□□□□ -0.5
CHL1-206ENST00000445697 MNX1P50219 401 aaPredicted RBP11.89□□□□□ -0.51
CHL1-206ENST00000445697 DCBLD2Q96PD2 775 aa11.81□□□□□ -0.52
CHL1-206ENST00000445697 TSPYL2Q9H2G4 693 aaPredicted RBP11.75□□□□□ -0.53
CHL1-206ENST00000445697 PHF12Q96QT6 1004 aa11.73□□□□□ -0.53
CHL1-206ENST00000445697 GALR2O43603 387 aaPredicted RBP11.67□□□□□ -0.54
CHL1-206ENST00000445697 FAM212AQ96EL1 285 aa11.66□□□□□ -0.54
CHL1-206ENST00000445697 CCDC61Q9Y6R9 512 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms