RNA–Protein interactions for RNA: ENST00000445340.2

CDC40-205, Transcript of cell division cycle 40, humanhuman

TSL 5

Gene CDC40, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-205ENST00000445340 AEBP2Q6ZN18 517 aaPredicted RBP23.65■■□□□ 1.38
CDC40-205ENST00000445340 CHIC1Q5VXU3 224 aa22.39■■□□□ 1.17
CDC40-205ENST00000445340 SENP3Q9H4L4 574 aaPredicted RBP20.12■□□□□ 0.81
CDC40-205ENST00000445340 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
CDC40-205ENST00000445340 FOXD1Q16676 465 aa18.81■□□□□ 0.6
CDC40-205ENST00000445340 PLPPR3Q6T4P5 718 aa17.85■□□□□ 0.45
CDC40-205ENST00000445340 PPP6R1Q9UPN7 881 aa17.6■□□□□ 0.41
CDC40-205ENST00000445340 MSH5O43196 834 aa17.56■□□□□ 0.4
CDC40-205ENST00000445340 PIAS4Q8N2W9 510 aaPredicted RBP17.53■□□□□ 0.4
CDC40-205ENST00000445340 ADRA2BP18089 450 aa17.52■□□□□ 0.4
CDC40-205ENST00000445340 POTEDQ86YR6 584 aa17.25■□□□□ 0.35
CDC40-205ENST00000445340 MAPK8IP2Q13387 824 aaPredicted RBP16.13■□□□□ 0.17
CDC40-205ENST00000445340 SCAF1Q9H7N4 1312 aaKnown RBP15.98■□□□□ 0.15
CDC40-205ENST00000445340 DMRT2Q9Y5R5 561 aa15.96■□□□□ 0.15
CDC40-205ENST00000445340 PPP4R3CPQ6ZMV5 832 aa15.67■□□□□ 0.1
CDC40-205ENST00000445340 HOXD11P31277 338 aaPredicted RBP15.37■□□□□ 0.05
CDC40-205ENST00000445340 CNKSR2Q8WXI2 1034 aa15.36■□□□□ 0.05
CDC40-205ENST00000445340 DCAF8L1A6NGE4 600 aa15.33■□□□□ 0.04
CDC40-205ENST00000445340 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
CDC40-205ENST00000445340 CACNB1Q02641 598 aaPredicted RBP15.14■□□□□ 0.01
CDC40-205ENST00000445340 NCBP3Q53F19 620 aaKnown RBP15.03■□□□□ -0
CDC40-205ENST00000445340 RNF39Q9H2S5 420 aa15.01□□□□□ -0.01
CDC40-205ENST00000445340 NPM3O75607 178 aaKnown RBP14.83□□□□□ -0.04
CDC40-205ENST00000445340 DNAJC5BQ9UF47 199 aa14.81□□□□□ -0.04
CDC40-205ENST00000445340 C1QBPQ07021 282 aaKnown RBP14.78□□□□□ -0.04
CDC40-205ENST00000445340 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.65□□□□□ -0.06
CDC40-205ENST00000445340 KCNA4P22459 653 aa14.53□□□□□ -0.08
CDC40-205ENST00000445340 U3KPZ7 1027 aaPredicted RBP14.33□□□□□ -0.12
CDC40-205ENST00000445340 SLC4A2P04920 1241 aa14.2□□□□□ -0.14
CDC40-205ENST00000445340 SPINK5Q9NQ38 1064 aaPredicted RBP14.16□□□□□ -0.14
CDC40-205ENST00000445340 CAPN15O75808 1086 aa14.12□□□□□ -0.15
CDC40-205ENST00000445340 DSG3P32926 999 aa14.05□□□□□ -0.16
CDC40-205ENST00000445340 TRHP20396 242 aaPredicted RBP13.9□□□□□ -0.18
CDC40-205ENST00000445340 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.87□□□□□ -0.19
CDC40-205ENST00000445340 APLP2Q06481 763 aa13.87□□□□□ -0.19
CDC40-205ENST00000445340 HNRNPUL2Q1KMD3 747 aaKnown RBP13.87□□□□□ -0.19
CDC40-205ENST00000445340 ZNF219Q9P2Y4 722 aaPredicted RBP13.82□□□□□ -0.2
CDC40-205ENST00000445340 SAMD1Q6SPF0 538 aaPredicted RBP13.8□□□□□ -0.2
CDC40-205ENST00000445340 ABCB7O75027 752 aa13.79□□□□□ -0.2
CDC40-205ENST00000445340 SLC4A1APQ9BWU0 796 aaKnown RBP13.69□□□□□ -0.22
CDC40-205ENST00000445340 MYCNP04198 464 aaPredicted RBP13.68□□□□□ -0.22
CDC40-205ENST00000445340 POLA2Q14181 598 aa13.53□□□□□ -0.24
CDC40-205ENST00000445340 FOXD4L1Q9NU39 408 aa13.53□□□□□ -0.24
CDC40-205ENST00000445340 POTEHQ6S545 545 aa13.51□□□□□ -0.25
CDC40-205ENST00000445340 ATF5Q9Y2D1 282 aaPredicted RBP13.44□□□□□ -0.26
CDC40-205ENST00000445340 ZBTB22O15209 634 aa13.36□□□□□ -0.27
CDC40-205ENST00000445340 RBM42Q9BTD8 480 aaKnown RBP13.36□□□□□ -0.27
CDC40-205ENST00000445340 ZBTB12Q9Y330 459 aaPredicted RBP13.17□□□□□ -0.3
CDC40-205ENST00000445340 ATXN8OSP0DMR3 200 aa13.12□□□□□ -0.31
CDC40-205ENST00000445340 CHRDL2Q6WN34 429 aa13.12□□□□□ -0.31
CDC40-205ENST00000445340 AKT1S1Q96B36 256 aa13.07□□□□□ -0.32
CDC40-205ENST00000445340 OSCARQ8IYS5 282 aa13.06□□□□□ -0.32
CDC40-205ENST00000445340 REM2Q8IYK8 340 aaPredicted RBP12.98□□□□□ -0.33
CDC40-205ENST00000445340 FBLN2P98095 1184 aa12.86□□□□□ -0.35
CDC40-205ENST00000445340 PITPNM1O00562 1244 aa12.82□□□□□ -0.36
CDC40-205ENST00000445340 MKRN4PQ13434 485 aaPredicted RBP12.81□□□□□ -0.36
CDC40-205ENST00000445340 PIP4P2Q8N4L2 257 aa12.81□□□□□ -0.36
CDC40-205ENST00000445340 SPDYE2BA6NHP3 402 aa12.79□□□□□ -0.36
CDC40-205ENST00000445340 SPDYE6P0CI01 402 aa12.79□□□□□ -0.36
CDC40-205ENST00000445340 SPDYE2Q495Y8 402 aa12.79□□□□□ -0.36
CDC40-205ENST00000445340 FXR2P51116 673 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDC40-205ENST00000445340 CSRNP3Q8WYN3 585 aa12.72□□□□□ -0.37
CDC40-205ENST00000445340 ZNF692Q9BU19 519 aaPredicted RBP12.67□□□□□ -0.38
CDC40-205ENST00000445340 SP7Q8TDD2 431 aaPredicted RBP12.63□□□□□ -0.39
CDC40-205ENST00000445340 SSUH2Q9Y2M2 353 aa12.62□□□□□ -0.39
CDC40-205ENST00000445340 HAX1O00165 279 aa12.61□□□□□ -0.39
CDC40-205ENST00000445340 CLEC11AQ9Y240 323 aa12.6□□□□□ -0.39
CDC40-205ENST00000445340 SPDYE1Q8NFV5 336 aaPredicted RBP12.58□□□□□ -0.4
CDC40-205ENST00000445340 EHMT2Q96KQ7 1210 aa12.51□□□□□ -0.41
CDC40-205ENST00000445340 PRKAR2AP13861 404 aaKnown RBP12.5□□□□□ -0.41
CDC40-205ENST00000445340 EVX2Q03828 476 aa12.48□□□□□ -0.41
CDC40-205ENST00000445340 PABPN1Q86U42 306 aaKnown RBP eCLIP12.48□□□□□ -0.41
CDC40-205ENST00000445340 PRR29P0C7W0 189 aa12.38□□□□□ -0.43
CDC40-205ENST00000445340 CHADLQ6NUI6 762 aa12.37□□□□□ -0.43
CDC40-205ENST00000445340 C19orf67A6NJJ6 358 aa12.32□□□□□ -0.44
CDC40-205ENST00000445340 FARP1Q9Y4F1 1045 aaPredicted RBP12.17□□□□□ -0.46
CDC40-205ENST00000445340 SPDYE4A6NLX3 237 aa12.16□□□□□ -0.46
CDC40-205ENST00000445340 GABBR2O75899 941 aa12.16□□□□□ -0.46
CDC40-205ENST00000445340 STAG3Q9UJ98 1225 aa12.1□□□□□ -0.47
CDC40-205ENST00000445340 CD44P16070 742 aaKnown RBP12.09□□□□□ -0.47
CDC40-205ENST00000445340 CREBZFQ9NS37 354 aa12.06□□□□□ -0.48
CDC40-205ENST00000445340 ZRANB1Q9UGI0 708 aa11.93□□□□□ -0.5
CDC40-205ENST00000445340 POTEIP0CG38 1075 aa11.92□□□□□ -0.5
CDC40-205ENST00000445340 CLCN6P51797 869 aa11.91□□□□□ -0.5
CDC40-205ENST00000445340 ZNF579Q8NAF0 562 aaKnown RBP11.89□□□□□ -0.51
CDC40-205ENST00000445340 LHX8Q68G74 356 aa11.87□□□□□ -0.51
CDC40-205ENST00000445340 MNX1P50219 401 aaPredicted RBP11.85□□□□□ -0.51
CDC40-205ENST00000445340 PROM2Q8N271 834 aa11.84□□□□□ -0.51
CDC40-205ENST00000445340 NPM1P06748 294 aaKnown RBP eCLIP11.82□□□□□ -0.52
CDC40-205ENST00000445340 DCBLD2Q96PD2 775 aa11.81□□□□□ -0.52
CDC40-205ENST00000445340 GALR2O43603 387 aaPredicted RBP11.78□□□□□ -0.52
CDC40-205ENST00000445340 PAK3O75914 559 aaPredicted RBP11.78□□□□□ -0.52
CDC40-205ENST00000445340 PHF12Q96QT6 1004 aa11.76□□□□□ -0.53
CDC40-205ENST00000445340 MIER1Q8N108 512 aa11.64□□□□□ -0.55
CDC40-205ENST00000445340 TSPYL2Q9H2G4 693 aaPredicted RBP11.64□□□□□ -0.55
CDC40-205ENST00000445340 MS4A3Q96HJ5 214 aa11.59□□□□□ -0.55
CDC40-205ENST00000445340 PELP1Q8IZL8 1130 aaKnown RBP11.58□□□□□ -0.56
CDC40-205ENST00000445340 PLEKHG5O94827 1062 aa11.56□□□□□ -0.56
CDC40-205ENST00000445340 CCDC61Q9Y6R9 512 aa11.56□□□□□ -0.56
CDC40-205ENST00000445340 POTEB2H3BUK9 544 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms