RNA–Protein interactions for RNA: ENST00000445049.1

PAXBP1-205, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 3

Gene PAXBP1, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-205ENST00000445049 AEBP2Q6ZN18 517 aaPredicted RBP18.17■□□□□ 0.5
PAXBP1-205ENST00000445049 CHIC1Q5VXU3 224 aa17.2■□□□□ 0.34
PAXBP1-205ENST00000445049 SENP3Q9H4L4 574 aaPredicted RBP15.51■□□□□ 0.07
PAXBP1-205ENST00000445049 PHF23Q9BUL5 403 aaPredicted RBP15.28■□□□□ 0.04
PAXBP1-205ENST00000445049 FOXD1Q16676 465 aa14.45□□□□□ -0.1
PAXBP1-205ENST00000445049 PLPPR3Q6T4P5 718 aa13.7□□□□□ -0.22
PAXBP1-205ENST00000445049 MSH5O43196 834 aa13.56□□□□□ -0.24
PAXBP1-205ENST00000445049 PPP6R1Q9UPN7 881 aa13.46□□□□□ -0.25
PAXBP1-205ENST00000445049 PIAS4Q8N2W9 510 aaPredicted RBP13.44□□□□□ -0.26
PAXBP1-205ENST00000445049 ADRA2BP18089 450 aa13.37□□□□□ -0.27
PAXBP1-205ENST00000445049 POTEDQ86YR6 584 aa13.33□□□□□ -0.28
PAXBP1-205ENST00000445049 DMRT2Q9Y5R5 561 aa12.31□□□□□ -0.44
PAXBP1-205ENST00000445049 MAPK8IP2Q13387 824 aaPredicted RBP12.29□□□□□ -0.44
PAXBP1-205ENST00000445049 SCAF1Q9H7N4 1312 aaKnown RBP12.27□□□□□ -0.45
PAXBP1-205ENST00000445049 PPP4R3CPQ6ZMV5 832 aa11.98□□□□□ -0.49
PAXBP1-205ENST00000445049 HOXD11P31277 338 aaPredicted RBP11.86□□□□□ -0.51
PAXBP1-205ENST00000445049 CNKSR2Q8WXI2 1034 aa11.8□□□□□ -0.52
PAXBP1-205ENST00000445049 RNF216Q9NWF9 866 aaPredicted RBP11.72□□□□□ -0.53
PAXBP1-205ENST00000445049 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
PAXBP1-205ENST00000445049 CACNB1Q02641 598 aaPredicted RBP11.6□□□□□ -0.55
PAXBP1-205ENST00000445049 RNF39Q9H2S5 420 aa11.58□□□□□ -0.56
PAXBP1-205ENST00000445049 DNAJC5BQ9UF47 199 aa11.55□□□□□ -0.56
PAXBP1-205ENST00000445049 NCBP3Q53F19 620 aaKnown RBP11.49□□□□□ -0.57
PAXBP1-205ENST00000445049 C1QBPQ07021 282 aaKnown RBP11.42□□□□□ -0.58
PAXBP1-205ENST00000445049 NPM3O75607 178 aaKnown RBP11.34□□□□□ -0.59
PAXBP1-205ENST00000445049 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.17□□□□□ -0.62
PAXBP1-205ENST00000445049 KCNA4P22459 653 aa11.04□□□□□ -0.64
PAXBP1-205ENST00000445049 U3KPZ7 1027 aaPredicted RBP10.99□□□□□ -0.65
PAXBP1-205ENST00000445049 SLC4A2P04920 1241 aa10.87□□□□□ -0.67
PAXBP1-205ENST00000445049 EHMT2Q96KQ7 1210 aa10.86□□□□□ -0.67
PAXBP1-205ENST00000445049 SPINK5Q9NQ38 1064 aaPredicted RBP10.82□□□□□ -0.68
PAXBP1-205ENST00000445049 DSG3P32926 999 aa10.81□□□□□ -0.68
PAXBP1-205ENST00000445049 CAPN15O75808 1086 aa10.76□□□□□ -0.69
PAXBP1-205ENST00000445049 APLP2Q06481 763 aa10.68□□□□□ -0.7
PAXBP1-205ENST00000445049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.67□□□□□ -0.7
PAXBP1-205ENST00000445049 HNRNPUL2Q1KMD3 747 aaKnown RBP10.67□□□□□ -0.7
PAXBP1-205ENST00000445049 ZNF219Q9P2Y4 722 aaPredicted RBP10.62□□□□□ -0.71
PAXBP1-205ENST00000445049 SAMD1Q6SPF0 538 aaPredicted RBP10.6□□□□□ -0.71
PAXBP1-205ENST00000445049 TRHP20396 242 aaPredicted RBP10.56□□□□□ -0.72
PAXBP1-205ENST00000445049 ABCB7O75027 752 aa10.49□□□□□ -0.73
PAXBP1-205ENST00000445049 MYCNP04198 464 aaPredicted RBP10.49□□□□□ -0.73
PAXBP1-205ENST00000445049 SLC4A1APQ9BWU0 796 aaKnown RBP10.46□□□□□ -0.73
PAXBP1-205ENST00000445049 POTEHQ6S545 545 aa10.42□□□□□ -0.74
PAXBP1-205ENST00000445049 CSRNP3Q8WYN3 585 aa10.4□□□□□ -0.74
PAXBP1-205ENST00000445049 FOXD4L1Q9NU39 408 aa10.34□□□□□ -0.75
PAXBP1-205ENST00000445049 POLA2Q14181 598 aa10.32□□□□□ -0.76
PAXBP1-205ENST00000445049 RBM42Q9BTD8 480 aaKnown RBP10.31□□□□□ -0.76
PAXBP1-205ENST00000445049 ATF5Q9Y2D1 282 aaPredicted RBP10.24□□□□□ -0.77
PAXBP1-205ENST00000445049 ZBTB22O15209 634 aa10.17□□□□□ -0.78
PAXBP1-205ENST00000445049 ZBTB12Q9Y330 459 aaPredicted RBP10.15□□□□□ -0.78
PAXBP1-205ENST00000445049 ATXN8OSP0DMR3 200 aa10.1□□□□□ -0.79
PAXBP1-205ENST00000445049 CHRDL2Q6WN34 429 aa10.09□□□□□ -0.79
PAXBP1-205ENST00000445049 AKT1S1Q96B36 256 aa10.07□□□□□ -0.8
PAXBP1-205ENST00000445049 OSCARQ8IYS5 282 aa9.98□□□□□ -0.81
PAXBP1-205ENST00000445049 REM2Q8IYK8 340 aaPredicted RBP9.95□□□□□ -0.82
PAXBP1-205ENST00000445049 PIP4P2Q8N4L2 257 aa9.84□□□□□ -0.83
PAXBP1-205ENST00000445049 SPDYE2BA6NHP3 402 aa9.83□□□□□ -0.84
PAXBP1-205ENST00000445049 PITPNM1O00562 1244 aa9.83□□□□□ -0.84
PAXBP1-205ENST00000445049 SPDYE6P0CI01 402 aa9.83□□□□□ -0.84
PAXBP1-205ENST00000445049 SPDYE2Q495Y8 402 aa9.83□□□□□ -0.84
PAXBP1-205ENST00000445049 FBLN2P98095 1184 aa9.82□□□□□ -0.84
PAXBP1-205ENST00000445049 FXR2P51116 673 aaKnown RBP eCLIP9.81□□□□□ -0.84
PAXBP1-205ENST00000445049 MKRN4PQ13434 485 aaPredicted RBP9.79□□□□□ -0.84
PAXBP1-205ENST00000445049 SP7Q8TDD2 431 aaPredicted RBP9.75□□□□□ -0.85
PAXBP1-205ENST00000445049 SSUH2Q9Y2M2 353 aa9.72□□□□□ -0.85
PAXBP1-205ENST00000445049 SLC24A1O60721 1099 aa9.7□□□□□ -0.86
PAXBP1-205ENST00000445049 AMER1Q5JTC6 1135 aaPredicted RBP9.65□□□□□ -0.86
PAXBP1-205ENST00000445049 SPDYE1Q8NFV5 336 aaPredicted RBP9.65□□□□□ -0.86
PAXBP1-205ENST00000445049 ZNF692Q9BU19 519 aaPredicted RBP9.65□□□□□ -0.86
PAXBP1-205ENST00000445049 HAX1O00165 279 aa9.62□□□□□ -0.87
PAXBP1-205ENST00000445049 RTN4Q9NQC3 1192 aaKnown RBP9.61□□□□□ -0.87
PAXBP1-205ENST00000445049 PRKAR2AP13861 404 aaKnown RBP9.55□□□□□ -0.88
PAXBP1-205ENST00000445049 EVX2Q03828 476 aa9.55□□□□□ -0.88
PAXBP1-205ENST00000445049 CLEC11AQ9Y240 323 aa9.55□□□□□ -0.88
PAXBP1-205ENST00000445049 PABPN1Q86U42 306 aaKnown RBP eCLIP9.5□□□□□ -0.89
PAXBP1-205ENST00000445049 C19orf67A6NJJ6 358 aa9.49□□□□□ -0.89
PAXBP1-205ENST00000445049 PRR29P0C7W0 189 aa9.43□□□□□ -0.9
PAXBP1-205ENST00000445049 FKBP8Q14318 412 aa9.4□□□□□ -0.9
PAXBP1-205ENST00000445049 CHADLQ6NUI6 762 aa9.4□□□□□ -0.9
PAXBP1-205ENST00000445049 GABBR2O75899 941 aa9.33□□□□□ -0.92
PAXBP1-205ENST00000445049 FARP1Q9Y4F1 1045 aaPredicted RBP9.31□□□□□ -0.92
PAXBP1-205ENST00000445049 STAG3Q9UJ98 1225 aa9.27□□□□□ -0.93
PAXBP1-205ENST00000445049 SPDYE4A6NLX3 237 aa9.25□□□□□ -0.93
PAXBP1-205ENST00000445049 CLCN6P51797 869 aa9.25□□□□□ -0.93
PAXBP1-205ENST00000445049 CD44P16070 742 aaKnown RBP9.24□□□□□ -0.93
PAXBP1-205ENST00000445049 CREBZFQ9NS37 354 aa9.23□□□□□ -0.93
PAXBP1-205ENST00000445049 ZNF579Q8NAF0 562 aaKnown RBP9.17□□□□□ -0.94
PAXBP1-205ENST00000445049 POTEIP0CG38 1075 aa9.16□□□□□ -0.94
PAXBP1-205ENST00000445049 PROM2Q8N271 834 aa9.15□□□□□ -0.94
PAXBP1-205ENST00000445049 LHX8Q68G74 356 aa9.12□□□□□ -0.95
PAXBP1-205ENST00000445049 MNX1P50219 401 aaPredicted RBP9.11□□□□□ -0.95
PAXBP1-205ENST00000445049 ZRANB1Q9UGI0 708 aa9.09□□□□□ -0.95
PAXBP1-205ENST00000445049 NPM1P06748 294 aaKnown RBP eCLIP9.03□□□□□ -0.96
PAXBP1-205ENST00000445049 DCBLD2Q96PD2 775 aa9.02□□□□□ -0.97
PAXBP1-205ENST00000445049 GALR2O43603 387 aaPredicted RBP9.01□□□□□ -0.97
PAXBP1-205ENST00000445049 PAK3O75914 559 aaPredicted RBP8.99□□□□□ -0.97
PAXBP1-205ENST00000445049 PHF12Q96QT6 1004 aa8.95□□□□□ -0.98
PAXBP1-205ENST00000445049 FBXO3Q9UK99 471 aa8.93□□□□□ -0.98
PAXBP1-205ENST00000445049 ASTLQ6HA08 431 aaPredicted RBP8.88□□□□□ -0.99
PAXBP1-205ENST00000445049 CCDC61Q9Y6R9 512 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms