RNA–Protein interactions for RNA: ENST00000444900.1

LINC01553-202, Transcript of long intergenic non-protein coding RNA 1553, humanhuman

TSL 1 (best)

Gene LINC01553, Length 1,815 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01553-202ENST00000444900 AEBP2Q6ZN18 517 aaPredicted RBP19.65■□□□□ 0.74
LINC01553-202ENST00000444900 CHIC1Q5VXU3 224 aa18.46■□□□□ 0.55
LINC01553-202ENST00000444900 SENP3Q9H4L4 574 aaPredicted RBP16.86■□□□□ 0.29
LINC01553-202ENST00000444900 PHF23Q9BUL5 403 aaPredicted RBP16.57■□□□□ 0.24
LINC01553-202ENST00000444900 FOXD1Q16676 465 aa15.7■□□□□ 0.1
LINC01553-202ENST00000444900 POTEDQ86YR6 584 aa14.87□□□□□ -0.03
LINC01553-202ENST00000444900 MSH5O43196 834 aa14.85□□□□□ -0.03
LINC01553-202ENST00000444900 PLPPR3Q6T4P5 718 aa14.65□□□□□ -0.06
LINC01553-202ENST00000444900 PIAS4Q8N2W9 510 aaPredicted RBP14.62□□□□□ -0.07
LINC01553-202ENST00000444900 PPP6R1Q9UPN7 881 aa14.46□□□□□ -0.09
LINC01553-202ENST00000444900 ADRA2BP18089 450 aa14.41□□□□□ -0.1
LINC01553-202ENST00000444900 DMRT2Q9Y5R5 561 aa13.32□□□□□ -0.28
LINC01553-202ENST00000444900 MAPK8IP2Q13387 824 aaPredicted RBP13.29□□□□□ -0.28
LINC01553-202ENST00000444900 SCAF1Q9H7N4 1312 aaKnown RBP13.26□□□□□ -0.29
LINC01553-202ENST00000444900 CACNB1Q02641 598 aaPredicted RBP12.86□□□□□ -0.35
LINC01553-202ENST00000444900 PPP4R3CPQ6ZMV5 832 aa12.79□□□□□ -0.36
LINC01553-202ENST00000444900 DCAF8L1A6NGE4 600 aa12.75□□□□□ -0.37
LINC01553-202ENST00000444900 HOXD11P31277 338 aaPredicted RBP12.74□□□□□ -0.37
LINC01553-202ENST00000444900 CNKSR2Q8WXI2 1034 aa12.63□□□□□ -0.39
LINC01553-202ENST00000444900 RNF39Q9H2S5 420 aa12.62□□□□□ -0.39
LINC01553-202ENST00000444900 RNF216Q9NWF9 866 aaPredicted RBP12.58□□□□□ -0.4
LINC01553-202ENST00000444900 C1QBPQ07021 282 aaKnown RBP12.44□□□□□ -0.42
LINC01553-202ENST00000444900 KCNA4P22459 653 aa12.42□□□□□ -0.42
LINC01553-202ENST00000444900 DNAJC5BQ9UF47 199 aa12.4□□□□□ -0.42
LINC01553-202ENST00000444900 EHMT2Q96KQ7 1210 aa12.36□□□□□ -0.43
LINC01553-202ENST00000444900 NCBP3Q53F19 620 aaKnown RBP12.26□□□□□ -0.45
LINC01553-202ENST00000444900 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.13□□□□□ -0.47
LINC01553-202ENST00000444900 NPM3O75607 178 aaKnown RBP12.04□□□□□ -0.48
LINC01553-202ENST00000444900 SLC4A1APQ9BWU0 796 aaKnown RBP11.93□□□□□ -0.5
LINC01553-202ENST00000444900 CSRNP3Q8WYN3 585 aa11.86□□□□□ -0.51
LINC01553-202ENST00000444900 U3KPZ7 1027 aaPredicted RBP11.83□□□□□ -0.52
LINC01553-202ENST00000444900 CAPN15O75808 1086 aa11.72□□□□□ -0.53
LINC01553-202ENST00000444900 DSG3P32926 999 aa11.72□□□□□ -0.53
LINC01553-202ENST00000444900 SPINK5Q9NQ38 1064 aaPredicted RBP11.71□□□□□ -0.54
LINC01553-202ENST00000444900 POTEHQ6S545 545 aa11.6□□□□□ -0.55
LINC01553-202ENST00000444900 SLC4A2P04920 1241 aa11.56□□□□□ -0.56
LINC01553-202ENST00000444900 APLP2Q06481 763 aa11.56□□□□□ -0.56
LINC01553-202ENST00000444900 ZNF219Q9P2Y4 722 aaPredicted RBP11.49□□□□□ -0.57
LINC01553-202ENST00000444900 TRHP20396 242 aaPredicted RBP11.47□□□□□ -0.57
LINC01553-202ENST00000444900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.46□□□□□ -0.57
LINC01553-202ENST00000444900 HNRNPUL2Q1KMD3 747 aaKnown RBP11.46□□□□□ -0.57
LINC01553-202ENST00000444900 ZBTB22O15209 634 aa11.44□□□□□ -0.58
LINC01553-202ENST00000444900 ABCB7O75027 752 aa11.41□□□□□ -0.58
LINC01553-202ENST00000444900 SAMD1Q6SPF0 538 aaPredicted RBP11.37□□□□□ -0.59
LINC01553-202ENST00000444900 RBM42Q9BTD8 480 aaKnown RBP11.24□□□□□ -0.61
LINC01553-202ENST00000444900 FOXD4L1Q9NU39 408 aa11.21□□□□□ -0.62
LINC01553-202ENST00000444900 MYCNP04198 464 aaPredicted RBP11.17□□□□□ -0.62
LINC01553-202ENST00000444900 POLA2Q14181 598 aa11.11□□□□□ -0.63
LINC01553-202ENST00000444900 CHRDL2Q6WN34 429 aa11.05□□□□□ -0.64
LINC01553-202ENST00000444900 ZBTB12Q9Y330 459 aaPredicted RBP10.93□□□□□ -0.66
LINC01553-202ENST00000444900 AKT1S1Q96B36 256 aa10.91□□□□□ -0.66
LINC01553-202ENST00000444900 ATF5Q9Y2D1 282 aaPredicted RBP10.87□□□□□ -0.67
LINC01553-202ENST00000444900 RTN4Q9NQC3 1192 aaKnown RBP10.79□□□□□ -0.68
LINC01553-202ENST00000444900 REM2Q8IYK8 340 aaPredicted RBP10.78□□□□□ -0.68
LINC01553-202ENST00000444900 SP7Q8TDD2 431 aaPredicted RBP10.77□□□□□ -0.68
LINC01553-202ENST00000444900 OSCARQ8IYS5 282 aa10.76□□□□□ -0.69
LINC01553-202ENST00000444900 PIP4P2Q8N4L2 257 aa10.72□□□□□ -0.69
LINC01553-202ENST00000444900 FKBP8Q14318 412 aa10.72□□□□□ -0.69
LINC01553-202ENST00000444900 AMER1Q5JTC6 1135 aaPredicted RBP10.72□□□□□ -0.69
LINC01553-202ENST00000444900 ATXN8OSP0DMR3 200 aa10.7□□□□□ -0.7
LINC01553-202ENST00000444900 SLC24A1O60721 1099 aa10.69□□□□□ -0.7
LINC01553-202ENST00000444900 PITPNM1O00562 1244 aa10.66□□□□□ -0.7
LINC01553-202ENST00000444900 FXR2P51116 673 aaKnown RBP eCLIP10.64□□□□□ -0.71
LINC01553-202ENST00000444900 HAX1O00165 279 aa10.6□□□□□ -0.71
LINC01553-202ENST00000444900 SPDYE2BA6NHP3 402 aa10.55□□□□□ -0.72
LINC01553-202ENST00000444900 SPDYE6P0CI01 402 aa10.55□□□□□ -0.72
LINC01553-202ENST00000444900 SPDYE2Q495Y8 402 aa10.55□□□□□ -0.72
LINC01553-202ENST00000444900 FBLN2P98095 1184 aa10.54□□□□□ -0.72
LINC01553-202ENST00000444900 SPDYE1Q8NFV5 336 aaPredicted RBP10.42□□□□□ -0.74
LINC01553-202ENST00000444900 EVX2Q03828 476 aa10.41□□□□□ -0.74
LINC01553-202ENST00000444900 PRKAR2AP13861 404 aaKnown RBP10.39□□□□□ -0.75
LINC01553-202ENST00000444900 CLEC11AQ9Y240 323 aa10.38□□□□□ -0.75
LINC01553-202ENST00000444900 MKRN4PQ13434 485 aaPredicted RBP10.37□□□□□ -0.75
LINC01553-202ENST00000444900 SSUH2Q9Y2M2 353 aa10.37□□□□□ -0.75
LINC01553-202ENST00000444900 ZNF692Q9BU19 519 aaPredicted RBP10.35□□□□□ -0.75
LINC01553-202ENST00000444900 C19orf67A6NJJ6 358 aa10.31□□□□□ -0.76
LINC01553-202ENST00000444900 GABBR2O75899 941 aa10.2□□□□□ -0.78
LINC01553-202ENST00000444900 PRR29P0C7W0 189 aa10.19□□□□□ -0.78
LINC01553-202ENST00000444900 CHADLQ6NUI6 762 aa10.19□□□□□ -0.78
LINC01553-202ENST00000444900 PABPN1Q86U42 306 aaKnown RBP eCLIP10.19□□□□□ -0.78
LINC01553-202ENST00000444900 SPDYE4A6NLX3 237 aa10.1□□□□□ -0.79
LINC01553-202ENST00000444900 LHX8Q68G74 356 aa10.1□□□□□ -0.79
LINC01553-202ENST00000444900 FBXO3Q9UK99 471 aa10.08□□□□□ -0.8
LINC01553-202ENST00000444900 CD44P16070 742 aaKnown RBP10.05□□□□□ -0.8
LINC01553-202ENST00000444900 FARP1Q9Y4F1 1045 aaPredicted RBP10.05□□□□□ -0.8
LINC01553-202ENST00000444900 CLCN6P51797 869 aa10.04□□□□□ -0.8
LINC01553-202ENST00000444900 POTEIP0CG38 1075 aa9.96□□□□□ -0.81
LINC01553-202ENST00000444900 DCAF8L2P0C7V8 631 aa9.95□□□□□ -0.82
LINC01553-202ENST00000444900 VASPP50552 380 aaPredicted RBP9.95□□□□□ -0.82
LINC01553-202ENST00000444900 IFNLR1Q8IU57 520 aaPredicted RBP9.91□□□□□ -0.82
LINC01553-202ENST00000444900 PROM2Q8N271 834 aa9.91□□□□□ -0.82
LINC01553-202ENST00000444900 ZNF579Q8NAF0 562 aaKnown RBP9.91□□□□□ -0.82
LINC01553-202ENST00000444900 STAG3Q9UJ98 1225 aa9.91□□□□□ -0.82
LINC01553-202ENST00000444900 PLCB2Q00722 1185 aa9.9□□□□□ -0.82
LINC01553-202ENST00000444900 DCBLD2Q96PD2 775 aa9.89□□□□□ -0.83
LINC01553-202ENST00000444900 CREBZFQ9NS37 354 aa9.87□□□□□ -0.83
LINC01553-202ENST00000444900 ZRANB1Q9UGI0 708 aa9.86□□□□□ -0.83
LINC01553-202ENST00000444900 HAP1P54257 671 aaPredicted RBP9.84□□□□□ -0.83
LINC01553-202ENST00000444900 PKD2Q13563 968 aa9.78□□□□□ -0.84
LINC01553-202ENST00000444900 PAK3O75914 559 aaPredicted RBP9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms