RNA–Protein interactions for RNA: ENST00000444459.1

APPL1-202, Transcript of adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1, humanhuman

TSL 3

Gene APPL1, Length 516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APPL1-202ENST00000444459 AEBP2Q6ZN18 517 aaPredicted RBP26.26■■□□□ 1.79
APPL1-202ENST00000444459 CHIC1Q5VXU3 224 aa25.81■■□□□ 1.72
APPL1-202ENST00000444459 PHF23Q9BUL5 403 aaPredicted RBP22.73■■□□□ 1.23
APPL1-202ENST00000444459 SENP3Q9H4L4 574 aaPredicted RBP22.21■■□□□ 1.15
APPL1-202ENST00000444459 PLPPR3Q6T4P5 718 aa21.03■□□□□ 0.96
APPL1-202ENST00000444459 FOXD1Q16676 465 aa20.61■□□□□ 0.89
APPL1-202ENST00000444459 PPP6R1Q9UPN7 881 aa20■□□□□ 0.79
APPL1-202ENST00000444459 ADRA2BP18089 450 aa19.98■□□□□ 0.79
APPL1-202ENST00000444459 PIAS4Q8N2W9 510 aaPredicted RBP19.48■□□□□ 0.71
APPL1-202ENST00000444459 MSH5O43196 834 aa18.91■□□□□ 0.62
APPL1-202ENST00000444459 PPP4R3CPQ6ZMV5 832 aa18.56■□□□□ 0.56
APPL1-202ENST00000444459 KCNA4P22459 653 aa18.37■□□□□ 0.53
APPL1-202ENST00000444459 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
APPL1-202ENST00000444459 NCBP3Q53F19 620 aaKnown RBP18.1■□□□□ 0.49
APPL1-202ENST00000444459 MAPK8IP2Q13387 824 aaPredicted RBP18.08■□□□□ 0.48
APPL1-202ENST00000444459 CNKSR2Q8WXI2 1034 aa17.99■□□□□ 0.47
APPL1-202ENST00000444459 NPM3O75607 178 aaKnown RBP17.88■□□□□ 0.45
APPL1-202ENST00000444459 DMRT2Q9Y5R5 561 aa17.77■□□□□ 0.44
APPL1-202ENST00000444459 RNF216Q9NWF9 866 aaPredicted RBP17.6■□□□□ 0.41
APPL1-202ENST00000444459 SLC4A1APQ9BWU0 796 aaKnown RBP17.51■□□□□ 0.39
APPL1-202ENST00000444459 HOXD11P31277 338 aaPredicted RBP17.48■□□□□ 0.39
APPL1-202ENST00000444459 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
APPL1-202ENST00000444459 EHMT2Q96KQ7 1210 aa17.26■□□□□ 0.35
APPL1-202ENST00000444459 POTEDQ86YR6 584 aa17.25■□□□□ 0.35
APPL1-202ENST00000444459 DCAF8L1A6NGE4 600 aa16.99■□□□□ 0.31
APPL1-202ENST00000444459 CSRNP3Q8WYN3 585 aa16.97■□□□□ 0.31
APPL1-202ENST00000444459 ZBTB22O15209 634 aa16.93■□□□□ 0.3
APPL1-202ENST00000444459 SLC4A2P04920 1241 aa16.84■□□□□ 0.29
APPL1-202ENST00000444459 FOXD4L1Q9NU39 408 aa16.84■□□□□ 0.29
APPL1-202ENST00000444459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.65■□□□□ 0.26
APPL1-202ENST00000444459 MYCNP04198 464 aaPredicted RBP16.5■□□□□ 0.23
APPL1-202ENST00000444459 U3KPZ7 1027 aaPredicted RBP16.43■□□□□ 0.22
APPL1-202ENST00000444459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.24■□□□□ 0.19
APPL1-202ENST00000444459 HNRNPUL2Q1KMD3 747 aaKnown RBP16.24■□□□□ 0.19
APPL1-202ENST00000444459 RNF39Q9H2S5 420 aa16.24■□□□□ 0.19
APPL1-202ENST00000444459 ATXN8OSP0DMR3 200 aa16.21■□□□□ 0.19
APPL1-202ENST00000444459 SAMD1Q6SPF0 538 aaPredicted RBP16.2■□□□□ 0.18
APPL1-202ENST00000444459 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
APPL1-202ENST00000444459 C1QBPQ07021 282 aaKnown RBP16.04■□□□□ 0.16
APPL1-202ENST00000444459 APLP2Q06481 763 aa16.01■□□□□ 0.15
APPL1-202ENST00000444459 SPINK5Q9NQ38 1064 aaPredicted RBP15.91■□□□□ 0.14
APPL1-202ENST00000444459 CAPN15O75808 1086 aa15.82■□□□□ 0.12
APPL1-202ENST00000444459 TRHP20396 242 aaPredicted RBP15.8■□□□□ 0.12
APPL1-202ENST00000444459 ZNF219Q9P2Y4 722 aaPredicted RBP15.79■□□□□ 0.12
APPL1-202ENST00000444459 CACNB1Q02641 598 aaPredicted RBP15.66■□□□□ 0.1
APPL1-202ENST00000444459 POLA2Q14181 598 aa15.58■□□□□ 0.08
APPL1-202ENST00000444459 ABCB7O75027 752 aa15.55■□□□□ 0.08
APPL1-202ENST00000444459 DSG3P32926 999 aa15.52■□□□□ 0.08
APPL1-202ENST00000444459 MKRN4PQ13434 485 aaPredicted RBP15.38■□□□□ 0.05
APPL1-202ENST00000444459 FBLN2P98095 1184 aa15.34■□□□□ 0.05
APPL1-202ENST00000444459 FKBP8Q14318 412 aa15.32■□□□□ 0.04
APPL1-202ENST00000444459 ZBTB12Q9Y330 459 aaPredicted RBP15.32■□□□□ 0.04
APPL1-202ENST00000444459 SPDYE4A6NLX3 237 aa15.11■□□□□ 0.01
APPL1-202ENST00000444459 OSCARQ8IYS5 282 aa15.07■□□□□ 0
APPL1-202ENST00000444459 SPDYE2BA6NHP3 402 aa14.93□□□□□ -0.02
APPL1-202ENST00000444459 SPDYE6P0CI01 402 aa14.93□□□□□ -0.02
APPL1-202ENST00000444459 SPDYE2Q495Y8 402 aa14.93□□□□□ -0.02
APPL1-202ENST00000444459 ZNF692Q9BU19 519 aaPredicted RBP14.91□□□□□ -0.02
APPL1-202ENST00000444459 PROM2Q8N271 834 aa14.9□□□□□ -0.02
APPL1-202ENST00000444459 SSUH2Q9Y2M2 353 aa14.86□□□□□ -0.03
APPL1-202ENST00000444459 RBM42Q9BTD8 480 aaKnown RBP14.76□□□□□ -0.05
APPL1-202ENST00000444459 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
APPL1-202ENST00000444459 FBXO3Q9UK99 471 aa14.69□□□□□ -0.06
APPL1-202ENST00000444459 AKT1S1Q96B36 256 aa14.62□□□□□ -0.07
APPL1-202ENST00000444459 VASPP50552 380 aaPredicted RBP14.52□□□□□ -0.09
APPL1-202ENST00000444459 REM2Q8IYK8 340 aaPredicted RBP14.5□□□□□ -0.09
APPL1-202ENST00000444459 STAG3Q9UJ98 1225 aa14.49□□□□□ -0.09
APPL1-202ENST00000444459 SPDYE1Q8NFV5 336 aaPredicted RBP14.44□□□□□ -0.1
APPL1-202ENST00000444459 CLEC11AQ9Y240 323 aa14.38□□□□□ -0.11
APPL1-202ENST00000444459 PITPNM1O00562 1244 aa14.34□□□□□ -0.11
APPL1-202ENST00000444459 IFNLR1Q8IU57 520 aaPredicted RBP14.34□□□□□ -0.11
APPL1-202ENST00000444459 PLCD3Q8N3E9 789 aa14.3□□□□□ -0.12
APPL1-202ENST00000444459 MIER1Q8N108 512 aa14.29□□□□□ -0.12
APPL1-202ENST00000444459 AMER1Q5JTC6 1135 aaPredicted RBP14.28□□□□□ -0.12
APPL1-202ENST00000444459 RTN4Q9NQC3 1192 aaKnown RBP14.28□□□□□ -0.12
APPL1-202ENST00000444459 PRR29P0C7W0 189 aa14.27□□□□□ -0.13
APPL1-202ENST00000444459 KLHL34Q8N239 644 aa14.2□□□□□ -0.14
APPL1-202ENST00000444459 PLEKHG5O94827 1062 aa14.18□□□□□ -0.14
APPL1-202ENST00000444459 CREBZFQ9NS37 354 aa14.15□□□□□ -0.14
APPL1-202ENST00000444459 SPOCK2Q92563 424 aa14.11□□□□□ -0.15
APPL1-202ENST00000444459 ZBTB47Q9UFB7 747 aaPredicted RBP14.11□□□□□ -0.15
APPL1-202ENST00000444459 CHRDL2Q6WN34 429 aa14.09□□□□□ -0.15
APPL1-202ENST00000444459 MNX1P50219 401 aaPredicted RBP14.04□□□□□ -0.16
APPL1-202ENST00000444459 CHADLQ6NUI6 762 aa14.03□□□□□ -0.16
APPL1-202ENST00000444459 FXR2P51116 673 aaKnown RBP eCLIP14.02□□□□□ -0.17
APPL1-202ENST00000444459 PRKAR2AP13861 404 aaKnown RBP13.97□□□□□ -0.17
APPL1-202ENST00000444459 PIP4P2Q8N4L2 257 aa13.96□□□□□ -0.17
APPL1-202ENST00000444459 PKD2Q13563 968 aa13.94□□□□□ -0.18
APPL1-202ENST00000444459 NUBP1P53384 320 aa13.93□□□□□ -0.18
APPL1-202ENST00000444459 FARP1Q9Y4F1 1045 aaPredicted RBP13.9□□□□□ -0.18
APPL1-202ENST00000444459 NPM1P06748 294 aaKnown RBP eCLIP13.89□□□□□ -0.19
APPL1-202ENST00000444459 CIZ1Q9ULV3 898 aaPredicted RBP13.87□□□□□ -0.19
APPL1-202ENST00000444459 RASEFQ8IZ41 740 aa13.84□□□□□ -0.19
APPL1-202ENST00000444459 ECM2O94769 699 aaPredicted RBP13.8□□□□□ -0.2
APPL1-202ENST00000444459 GSE1Q14687 1217 aa13.8□□□□□ -0.2
APPL1-202ENST00000444459 FAM212AQ96EL1 285 aa13.8□□□□□ -0.2
APPL1-202ENST00000444459 DCAF8Q5TAQ9 597 aa13.79□□□□□ -0.2
APPL1-202ENST00000444459 TRIM41Q8WV44 630 aa13.71□□□□□ -0.21
APPL1-202ENST00000444459 TSPYL2Q9H2G4 693 aaPredicted RBP13.69□□□□□ -0.22
APPL1-202ENST00000444459 RGL2O15211 777 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms