RNA–Protein interactions for RNA: ENST00000443977.1

PRKD3-204, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 518 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-204ENST00000443977 AEBP2Q6ZN18 517 aaPredicted RBP19.31■□□□□ 0.68
PRKD3-204ENST00000443977 CHIC1Q5VXU3 224 aa18.22■□□□□ 0.51
PRKD3-204ENST00000443977 SENP3Q9H4L4 574 aaPredicted RBP16.67■□□□□ 0.26
PRKD3-204ENST00000443977 PHF23Q9BUL5 403 aaPredicted RBP16.34■□□□□ 0.21
PRKD3-204ENST00000443977 FOXD1Q16676 465 aa15.46■□□□□ 0.07
PRKD3-204ENST00000443977 MSH5O43196 834 aa14.69□□□□□ -0.06
PRKD3-204ENST00000443977 POTEDQ86YR6 584 aa14.66□□□□□ -0.06
PRKD3-204ENST00000443977 PLPPR3Q6T4P5 718 aa14.48□□□□□ -0.09
PRKD3-204ENST00000443977 PIAS4Q8N2W9 510 aaPredicted RBP14.47□□□□□ -0.09
PRKD3-204ENST00000443977 PPP6R1Q9UPN7 881 aa14.2□□□□□ -0.14
PRKD3-204ENST00000443977 ADRA2BP18089 450 aa14.19□□□□□ -0.14
PRKD3-204ENST00000443977 SCAF1Q9H7N4 1312 aaKnown RBP13.14□□□□□ -0.31
PRKD3-204ENST00000443977 DMRT2Q9Y5R5 561 aa13.13□□□□□ -0.31
PRKD3-204ENST00000443977 MAPK8IP2Q13387 824 aaPredicted RBP13.07□□□□□ -0.32
PRKD3-204ENST00000443977 CACNB1Q02641 598 aaPredicted RBP12.74□□□□□ -0.37
PRKD3-204ENST00000443977 DCAF8L1A6NGE4 600 aa12.67□□□□□ -0.38
PRKD3-204ENST00000443977 PPP4R3CPQ6ZMV5 832 aa12.61□□□□□ -0.39
PRKD3-204ENST00000443977 HOXD11P31277 338 aaPredicted RBP12.53□□□□□ -0.4
PRKD3-204ENST00000443977 CNKSR2Q8WXI2 1034 aa12.47□□□□□ -0.41
PRKD3-204ENST00000443977 RNF39Q9H2S5 420 aa12.43□□□□□ -0.42
PRKD3-204ENST00000443977 RNF216Q9NWF9 866 aaPredicted RBP12.41□□□□□ -0.42
PRKD3-204ENST00000443977 C1QBPQ07021 282 aaKnown RBP12.29□□□□□ -0.44
PRKD3-204ENST00000443977 DNAJC5BQ9UF47 199 aa12.21□□□□□ -0.45
PRKD3-204ENST00000443977 NCBP3Q53F19 620 aaKnown RBP12.16□□□□□ -0.46
PRKD3-204ENST00000443977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.02□□□□□ -0.494e-6■□□□□ 8.4
PRKD3-204ENST00000443977 NPM3O75607 178 aaKnown RBP11.86□□□□□ -0.51
PRKD3-204ENST00000443977 U3KPZ7 1027 aaPredicted RBP11.65□□□□□ -0.54
PRKD3-204ENST00000443977 CAPN15O75808 1086 aa11.63□□□□□ -0.55
PRKD3-204ENST00000443977 DSG3P32926 999 aa11.55□□□□□ -0.56
PRKD3-204ENST00000443977 SPINK5Q9NQ38 1064 aaPredicted RBP11.54□□□□□ -0.56
PRKD3-204ENST00000443977 APLP2Q06481 763 aa11.5□□□□□ -0.57
PRKD3-204ENST00000443977 POTEHQ6S545 545 aa11.48□□□□□ -0.57
PRKD3-204ENST00000443977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.39□□□□□ -0.59
PRKD3-204ENST00000443977 HNRNPUL2Q1KMD3 747 aaKnown RBP11.39□□□□□ -0.59
PRKD3-204ENST00000443977 ZNF219Q9P2Y4 722 aaPredicted RBP11.39□□□□□ -0.59
PRKD3-204ENST00000443977 KCNA4P22459 653 aa11.38□□□□□ -0.59
PRKD3-204ENST00000443977 TRHP20396 242 aaPredicted RBP11.37□□□□□ -0.59
PRKD3-204ENST00000443977 SLC4A2P04920 1241 aa11.34□□□□□ -0.59
PRKD3-204ENST00000443977 ABCB7O75027 752 aa11.29□□□□□ -0.6
PRKD3-204ENST00000443977 SAMD1Q6SPF0 538 aaPredicted RBP11.27□□□□□ -0.61
PRKD3-204ENST00000443977 RBM42Q9BTD8 480 aaKnown RBP11.16□□□□□ -0.62
PRKD3-204ENST00000443977 MYCNP04198 464 aaPredicted RBP11.06□□□□□ -0.64
PRKD3-204ENST00000443977 POLA2Q14181 598 aa10.97□□□□□ -0.65
PRKD3-204ENST00000443977 CHRDL2Q6WN34 429 aa10.93□□□□□ -0.66
PRKD3-204ENST00000443977 ZBTB12Q9Y330 459 aaPredicted RBP10.86□□□□□ -0.67
PRKD3-204ENST00000443977 AKT1S1Q96B36 256 aa10.79□□□□□ -0.68
PRKD3-204ENST00000443977 FOXD4L1Q9NU39 408 aa10.78□□□□□ -0.68
PRKD3-204ENST00000443977 SLC4A1APQ9BWU0 796 aaKnown RBP10.77□□□□□ -0.69
PRKD3-204ENST00000443977 ATF5Q9Y2D1 282 aaPredicted RBP10.67□□□□□ -0.7
PRKD3-204ENST00000443977 SP7Q8TDD2 431 aaPredicted RBP10.65□□□□□ -0.7
PRKD3-204ENST00000443977 REM2Q8IYK8 340 aaPredicted RBP10.64□□□□□ -0.71
PRKD3-204ENST00000443977 OSCARQ8IYS5 282 aa10.64□□□□□ -0.71
PRKD3-204ENST00000443977 PIP4P2Q8N4L2 257 aa10.59□□□□□ -0.71
PRKD3-204ENST00000443977 PITPNM1O00562 1244 aa10.53□□□□□ -0.72
PRKD3-204ENST00000443977 HAX1O00165 279 aa10.51□□□□□ -0.73
PRKD3-204ENST00000443977 ATXN8OSP0DMR3 200 aa10.5□□□□□ -0.73
PRKD3-204ENST00000443977 FXR2P51116 673 aaKnown RBP eCLIP10.48□□□□□ -0.73
PRKD3-204ENST00000443977 FBLN2P98095 1184 aa10.47□□□□□ -0.73
PRKD3-204ENST00000443977 SPDYE2BA6NHP3 402 aa10.44□□□□□ -0.74
PRKD3-204ENST00000443977 SPDYE6P0CI01 402 aa10.44□□□□□ -0.74
PRKD3-204ENST00000443977 SPDYE2Q495Y8 402 aa10.44□□□□□ -0.74
PRKD3-204ENST00000443977 ZBTB22O15209 634 aa10.41□□□□□ -0.74
PRKD3-204ENST00000443977 SPDYE1Q8NFV5 336 aaPredicted RBP10.34□□□□□ -0.75
PRKD3-204ENST00000443977 CLEC11AQ9Y240 323 aa10.3□□□□□ -0.76
PRKD3-204ENST00000443977 PRKAR2AP13861 404 aaKnown RBP10.28□□□□□ -0.76
PRKD3-204ENST00000443977 ZNF692Q9BU19 519 aaPredicted RBP10.25□□□□□ -0.77
PRKD3-204ENST00000443977 SSUH2Q9Y2M2 353 aa10.22□□□□□ -0.77
PRKD3-204ENST00000443977 EVX2Q03828 476 aa10.21□□□□□ -0.77
PRKD3-204ENST00000443977 MKRN4PQ13434 485 aaPredicted RBP10.18□□□□□ -0.78
PRKD3-204ENST00000443977 C19orf67A6NJJ6 358 aa10.16□□□□□ -0.78
PRKD3-204ENST00000443977 PRR29P0C7W0 189 aa10.1□□□□□ -0.79
PRKD3-204ENST00000443977 PABPN1Q86U42 306 aaKnown RBP eCLIP10.07□□□□□ -0.8
PRKD3-204ENST00000443977 GABBR2O75899 941 aa10.06□□□□□ -0.8
PRKD3-204ENST00000443977 CHADLQ6NUI6 762 aa10.06□□□□□ -0.8
PRKD3-204ENST00000443977 LHX8Q68G74 356 aa9.98□□□□□ -0.81
PRKD3-204ENST00000443977 CD44P16070 742 aaKnown RBP9.96□□□□□ -0.82
PRKD3-204ENST00000443977 CLCN6P51797 869 aa9.94□□□□□ -0.82
PRKD3-204ENST00000443977 FARP1Q9Y4F1 1045 aaPredicted RBP9.93□□□□□ -0.82
PRKD3-204ENST00000443977 DCBLD2Q96PD2 775 aa9.83□□□□□ -0.84
PRKD3-204ENST00000443977 STAG3Q9UJ98 1225 aa9.83□□□□□ -0.84
PRKD3-204ENST00000443977 POTEIP0CG38 1075 aa9.78□□□□□ -0.84
PRKD3-204ENST00000443977 ZNF579Q8NAF0 562 aaKnown RBP9.78□□□□□ -0.84
PRKD3-204ENST00000443977 ZRANB1Q9UGI0 708 aa9.77□□□□□ -0.85
PRKD3-204ENST00000443977 PAK3O75914 559 aaPredicted RBP9.75□□□□□ -0.85
PRKD3-204ENST00000443977 CSRNP3Q8WYN3 585 aa9.72□□□□□ -0.85
PRKD3-204ENST00000443977 CREBZFQ9NS37 354 aa9.72□□□□□ -0.85
PRKD3-204ENST00000443977 SPDYE4A6NLX3 237 aa9.67□□□□□ -0.86
PRKD3-204ENST00000443977 NPM1P06748 294 aaKnown RBP eCLIP9.66□□□□□ -0.86
PRKD3-204ENST00000443977 GALR2O43603 387 aaPredicted RBP9.63□□□□□ -0.87
PRKD3-204ENST00000443977 EHMT2Q96KQ7 1210 aa9.63□□□□□ -0.87
PRKD3-204ENST00000443977 PHF12Q96QT6 1004 aa9.58□□□□□ -0.88
PRKD3-204ENST00000443977 PLSCR2Q9NRY7 297 aa9.58□□□□□ -0.88
PRKD3-204ENST00000443977 OTUD5Q96G74 571 aa9.51□□□□□ -0.89
PRKD3-204ENST00000443977 MNX1P50219 401 aaPredicted RBP9.48□□□□□ -0.89
PRKD3-204ENST00000443977 SLC39A7Q92504 469 aa9.46□□□□□ -0.9
PRKD3-204ENST00000443977 MS4A3Q96HJ5 214 aa9.45□□□□□ -0.9
PRKD3-204ENST00000443977 METRNQ9UJH8 293 aa9.45□□□□□ -0.9
PRKD3-204ENST00000443977 POTEB2H3BUK9 544 aa9.44□□□□□ -0.9
PRKD3-204ENST00000443977 C7P10643 843 aa9.44□□□□□ -0.9
PRKD3-204ENST00000443977 ASTLQ6HA08 431 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms