RNA–Protein interactions for RNA: ENST00000443601.1

PCCA-207, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-207ENST00000443601 AEBP2Q6ZN18 517 aaPredicted RBP21.83■■□□□ 1.09
PCCA-207ENST00000443601 CHIC1Q5VXU3 224 aa20.66■□□□□ 0.9
PCCA-207ENST00000443601 SENP3Q9H4L4 574 aaPredicted RBP18.76■□□□□ 0.59
PCCA-207ENST00000443601 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
PCCA-207ENST00000443601 FOXD1Q16676 465 aa17.43■□□□□ 0.38
PCCA-207ENST00000443601 PLPPR3Q6T4P5 718 aa16.51■□□□□ 0.23
PCCA-207ENST00000443601 MSH5O43196 834 aa16.46■□□□□ 0.23
PCCA-207ENST00000443601 PIAS4Q8N2W9 510 aaPredicted RBP16.34■□□□□ 0.21
PCCA-207ENST00000443601 POTEDQ86YR6 584 aa16.23■□□□□ 0.19
PCCA-207ENST00000443601 PPP6R1Q9UPN7 881 aa16.16■□□□□ 0.18
PCCA-207ENST00000443601 ADRA2BP18089 450 aa16.15■□□□□ 0.18
PCCA-207ENST00000443601 SCAF1Q9H7N4 1312 aaKnown RBP14.9□□□□□ -0.02
PCCA-207ENST00000443601 MAPK8IP2Q13387 824 aaPredicted RBP14.86□□□□□ -0.03
PCCA-207ENST00000443601 DMRT2Q9Y5R5 561 aa14.81□□□□□ -0.04
PCCA-207ENST00000443601 PPP4R3CPQ6ZMV5 832 aa14.42□□□□□ -0.1
PCCA-207ENST00000443601 DCAF8L1A6NGE4 600 aa14.35□□□□□ -0.11
PCCA-207ENST00000443601 CACNB1Q02641 598 aaPredicted RBP14.23□□□□□ -0.13
PCCA-207ENST00000443601 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
PCCA-207ENST00000443601 HOXD11P31277 338 aaPredicted RBP14.19□□□□□ -0.14
PCCA-207ENST00000443601 RNF216Q9NWF9 866 aaPredicted RBP14.1□□□□□ -0.15
PCCA-207ENST00000443601 KCNA4P22459 653 aa14.04□□□□□ -0.16
PCCA-207ENST00000443601 RNF39Q9H2S5 420 aa13.96□□□□□ -0.17
PCCA-207ENST00000443601 NCBP3Q53F19 620 aaKnown RBP13.9□□□□□ -0.18
PCCA-207ENST00000443601 C1QBPQ07021 282 aaKnown RBP13.8□□□□□ -0.2
PCCA-207ENST00000443601 DNAJC5BQ9UF47 199 aa13.74□□□□□ -0.21
PCCA-207ENST00000443601 NPM3O75607 178 aaKnown RBP13.64□□□□□ -0.23
PCCA-207ENST00000443601 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.64□□□□□ -0.23
PCCA-207ENST00000443601 SLC4A1APQ9BWU0 796 aaKnown RBP13.3□□□□□ -0.28
PCCA-207ENST00000443601 U3KPZ7 1027 aaPredicted RBP13.24□□□□□ -0.29
PCCA-207ENST00000443601 CAPN15O75808 1086 aa13.17□□□□□ -0.3
PCCA-207ENST00000443601 EHMT2Q96KQ7 1210 aa13.17□□□□□ -0.3
PCCA-207ENST00000443601 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
PCCA-207ENST00000443601 DSG3P32926 999 aa13.04□□□□□ -0.32
PCCA-207ENST00000443601 APLP2Q06481 763 aa13□□□□□ -0.33
PCCA-207ENST00000443601 ZBTB22O15209 634 aa12.98□□□□□ -0.33
PCCA-207ENST00000443601 SLC4A2P04920 1241 aa12.98□□□□□ -0.33
PCCA-207ENST00000443601 CSRNP3Q8WYN3 585 aa12.94□□□□□ -0.34
PCCA-207ENST00000443601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.93□□□□□ -0.34
PCCA-207ENST00000443601 HNRNPUL2Q1KMD3 747 aaKnown RBP12.93□□□□□ -0.34
PCCA-207ENST00000443601 TRHP20396 242 aaPredicted RBP12.92□□□□□ -0.34
PCCA-207ENST00000443601 ZNF219Q9P2Y4 722 aaPredicted RBP12.89□□□□□ -0.35
PCCA-207ENST00000443601 SAMD1Q6SPF0 538 aaPredicted RBP12.82□□□□□ -0.36
PCCA-207ENST00000443601 ABCB7O75027 752 aa12.81□□□□□ -0.36
PCCA-207ENST00000443601 FOXD4L1Q9NU39 408 aa12.76□□□□□ -0.37
PCCA-207ENST00000443601 POTEHQ6S545 545 aa12.73□□□□□ -0.37
PCCA-207ENST00000443601 MYCNP04198 464 aaPredicted RBP12.64□□□□□ -0.39
PCCA-207ENST00000443601 RBM42Q9BTD8 480 aaKnown RBP12.54□□□□□ -0.4
PCCA-207ENST00000443601 POLA2Q14181 598 aa12.5□□□□□ -0.41
PCCA-207ENST00000443601 ATF5Q9Y2D1 282 aaPredicted RBP12.38□□□□□ -0.43
PCCA-207ENST00000443601 ZBTB12Q9Y330 459 aaPredicted RBP12.29□□□□□ -0.44
PCCA-207ENST00000443601 CHRDL2Q6WN34 429 aa12.26□□□□□ -0.45
PCCA-207ENST00000443601 ATXN8OSP0DMR3 200 aa12.22□□□□□ -0.45
PCCA-207ENST00000443601 AKT1S1Q96B36 256 aa12.17□□□□□ -0.46
PCCA-207ENST00000443601 OSCARQ8IYS5 282 aa12.1□□□□□ -0.47
PCCA-207ENST00000443601 REM2Q8IYK8 340 aaPredicted RBP12.04□□□□□ -0.48
PCCA-207ENST00000443601 FBLN2P98095 1184 aa11.95□□□□□ -0.5
PCCA-207ENST00000443601 PIP4P2Q8N4L2 257 aa11.91□□□□□ -0.5
PCCA-207ENST00000443601 PITPNM1O00562 1244 aa11.9□□□□□ -0.5
PCCA-207ENST00000443601 SP7Q8TDD2 431 aaPredicted RBP11.87□□□□□ -0.51
PCCA-207ENST00000443601 SPDYE2BA6NHP3 402 aa11.86□□□□□ -0.51
PCCA-207ENST00000443601 SPDYE6P0CI01 402 aa11.86□□□□□ -0.51
PCCA-207ENST00000443601 SPDYE2Q495Y8 402 aa11.86□□□□□ -0.51
PCCA-207ENST00000443601 HAX1O00165 279 aa11.82□□□□□ -0.52
PCCA-207ENST00000443601 FXR2P51116 673 aaKnown RBP eCLIP11.81□□□□□ -0.52
PCCA-207ENST00000443601 MKRN4PQ13434 485 aaPredicted RBP11.79□□□□□ -0.52
PCCA-207ENST00000443601 CLEC11AQ9Y240 323 aa11.74□□□□□ -0.53
PCCA-207ENST00000443601 ZNF692Q9BU19 519 aaPredicted RBP11.73□□□□□ -0.53
PCCA-207ENST00000443601 SPDYE1Q8NFV5 336 aaPredicted RBP11.71□□□□□ -0.53
PCCA-207ENST00000443601 FKBP8Q14318 412 aa11.66□□□□□ -0.54
PCCA-207ENST00000443601 PRKAR2AP13861 404 aaKnown RBP11.64□□□□□ -0.55
PCCA-207ENST00000443601 SSUH2Q9Y2M2 353 aa11.62□□□□□ -0.55
PCCA-207ENST00000443601 PABPN1Q86U42 306 aaKnown RBP eCLIP11.53□□□□□ -0.56
PCCA-207ENST00000443601 EVX2Q03828 476 aa11.52□□□□□ -0.57
PCCA-207ENST00000443601 PRR29P0C7W0 189 aa11.51□□□□□ -0.57
PCCA-207ENST00000443601 SPDYE4A6NLX3 237 aa11.48□□□□□ -0.57
PCCA-207ENST00000443601 CHADLQ6NUI6 762 aa11.46□□□□□ -0.57
PCCA-207ENST00000443601 C19orf67A6NJJ6 358 aa11.44□□□□□ -0.58
PCCA-207ENST00000443601 GABBR2O75899 941 aa11.33□□□□□ -0.6
PCCA-207ENST00000443601 PROM2Q8N271 834 aa11.28□□□□□ -0.6
PCCA-207ENST00000443601 CD44P16070 742 aaKnown RBP11.27□□□□□ -0.61
PCCA-207ENST00000443601 FARP1Q9Y4F1 1045 aaPredicted RBP11.27□□□□□ -0.61
PCCA-207ENST00000443601 STAG3Q9UJ98 1225 aa11.23□□□□□ -0.61
PCCA-207ENST00000443601 CLCN6P51797 869 aa11.16□□□□□ -0.62
PCCA-207ENST00000443601 LHX8Q68G74 356 aa11.15□□□□□ -0.62
PCCA-207ENST00000443601 CREBZFQ9NS37 354 aa11.1□□□□□ -0.63
PCCA-207ENST00000443601 ZRANB1Q9UGI0 708 aa11.09□□□□□ -0.63
PCCA-207ENST00000443601 DCBLD2Q96PD2 775 aa11.08□□□□□ -0.64
PCCA-207ENST00000443601 PAK3O75914 559 aaPredicted RBP11.05□□□□□ -0.64
PCCA-207ENST00000443601 ZNF579Q8NAF0 562 aaKnown RBP11.04□□□□□ -0.64
PCCA-207ENST00000443601 FBXO3Q9UK99 471 aa11.04□□□□□ -0.64
PCCA-207ENST00000443601 POTEIP0CG38 1075 aa11.02□□□□□ -0.65
PCCA-207ENST00000443601 NPM1P06748 294 aaKnown RBP eCLIP11□□□□□ -0.65
PCCA-207ENST00000443601 VASPP50552 380 aaPredicted RBP11□□□□□ -0.65
PCCA-207ENST00000443601 IFNLR1Q8IU57 520 aaPredicted RBP10.94□□□□□ -0.66
PCCA-207ENST00000443601 GALR2O43603 387 aaPredicted RBP10.91□□□□□ -0.66
PCCA-207ENST00000443601 MIER1Q8N108 512 aa10.89□□□□□ -0.67
PCCA-207ENST00000443601 PHF12Q96QT6 1004 aa10.89□□□□□ -0.67
PCCA-207ENST00000443601 PLCD3Q8N3E9 789 aa10.86□□□□□ -0.67
PCCA-207ENST00000443601 RTN4Q9NQC3 1192 aaKnown RBP10.86□□□□□ -0.67
PCCA-207ENST00000443601 MNX1P50219 401 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms