RNA–Protein interactions for RNA: ENST00000443253.1

BBX-212, Transcript of BBX, HMG-box containing, humanhuman

TSL 5

Gene BBX, Length 238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-212ENST00000443253 AEBP2Q6ZN18 517 aaPredicted RBP23.47■■□□□ 1.35
BBX-212ENST00000443253 CHIC1Q5VXU3 224 aa21.95■■□□□ 1.1
BBX-212ENST00000443253 SENP3Q9H4L4 574 aaPredicted RBP20.11■□□□□ 0.81
BBX-212ENST00000443253 PHF23Q9BUL5 403 aaPredicted RBP19.77■□□□□ 0.76
BBX-212ENST00000443253 FOXD1Q16676 465 aa18.79■□□□□ 0.6
BBX-212ENST00000443253 POTEDQ86YR6 584 aa18.16■□□□□ 0.5
BBX-212ENST00000443253 MSH5O43196 834 aa17.78■□□□□ 0.44
BBX-212ENST00000443253 PIAS4Q8N2W9 510 aaPredicted RBP17.47■□□□□ 0.39
BBX-212ENST00000443253 PLPPR3Q6T4P5 718 aa17.24■□□□□ 0.35
BBX-212ENST00000443253 PPP6R1Q9UPN7 881 aa17.2■□□□□ 0.34
BBX-212ENST00000443253 ADRA2BP18089 450 aa17.13■□□□□ 0.33
BBX-212ENST00000443253 MAPK8IP2Q13387 824 aaPredicted RBP15.87■□□□□ 0.13
BBX-212ENST00000443253 DMRT2Q9Y5R5 561 aa15.86■□□□□ 0.13
BBX-212ENST00000443253 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
BBX-212ENST00000443253 CACNB1Q02641 598 aaPredicted RBP15.56■□□□□ 0.08
BBX-212ENST00000443253 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
BBX-212ENST00000443253 RNF39Q9H2S5 420 aa15.11■□□□□ 0.01
BBX-212ENST00000443253 HOXD11P31277 338 aaPredicted RBP15.09■□□□□ 0.01
BBX-212ENST00000443253 PPP4R3CPQ6ZMV5 832 aa15.05■□□□□ -0
BBX-212ENST00000443253 C1QBPQ07021 282 aaKnown RBP14.87□□□□□ -0.03
BBX-212ENST00000443253 CNKSR2Q8WXI2 1034 aa14.87□□□□□ -0.03
BBX-212ENST00000443253 RNF216Q9NWF9 866 aaPredicted RBP14.85□□□□□ -0.03
BBX-212ENST00000443253 DNAJC5BQ9UF47 199 aa14.64□□□□□ -0.07
BBX-212ENST00000443253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.4□□□□□ -0.11e-7■□□□□ 8.1
BBX-212ENST00000443253 NCBP3Q53F19 620 aaKnown RBP14.33□□□□□ -0.12
BBX-212ENST00000443253 POTEHQ6S545 545 aa14.15□□□□□ -0.14
BBX-212ENST00000443253 NPM3O75607 178 aaKnown RBP14.12□□□□□ -0.15
BBX-212ENST00000443253 U3KPZ7 1027 aaPredicted RBP14.03□□□□□ -0.16
BBX-212ENST00000443253 CAPN15O75808 1086 aa14□□□□□ -0.17
BBX-212ENST00000443253 DSG3P32926 999 aa14□□□□□ -0.17
BBX-212ENST00000443253 SPINK5Q9NQ38 1064 aaPredicted RBP13.98□□□□□ -0.17
BBX-212ENST00000443253 TRHP20396 242 aaPredicted RBP13.66□□□□□ -0.22
BBX-212ENST00000443253 ABCB7O75027 752 aa13.63□□□□□ -0.23
BBX-212ENST00000443253 APLP2Q06481 763 aa13.6□□□□□ -0.23
BBX-212ENST00000443253 ZNF219Q9P2Y4 722 aaPredicted RBP13.6□□□□□ -0.23
BBX-212ENST00000443253 SLC4A2P04920 1241 aa13.59□□□□□ -0.23
BBX-212ENST00000443253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.47□□□□□ -0.25
BBX-212ENST00000443253 HNRNPUL2Q1KMD3 747 aaKnown RBP13.47□□□□□ -0.25
BBX-212ENST00000443253 KCNA4P22459 653 aa13.42□□□□□ -0.26
BBX-212ENST00000443253 RBM42Q9BTD8 480 aaKnown RBP13.38□□□□□ -0.27
BBX-212ENST00000443253 SAMD1Q6SPF0 538 aaPredicted RBP13.37□□□□□ -0.27
BBX-212ENST00000443253 CHRDL2Q6WN34 429 aa13.27□□□□□ -0.29
BBX-212ENST00000443253 POLA2Q14181 598 aa13.16□□□□□ -0.3
BBX-212ENST00000443253 MYCNP04198 464 aaPredicted RBP13.07□□□□□ -0.32
BBX-212ENST00000443253 SP7Q8TDD2 431 aaPredicted RBP13.04□□□□□ -0.32
BBX-212ENST00000443253 AKT1S1Q96B36 256 aa12.97□□□□□ -0.33
BBX-212ENST00000443253 PIP4P2Q8N4L2 257 aa12.86□□□□□ -0.35
BBX-212ENST00000443253 ZBTB12Q9Y330 459 aaPredicted RBP12.86□□□□□ -0.35
BBX-212ENST00000443253 REM2Q8IYK8 340 aaPredicted RBP12.84□□□□□ -0.35
BBX-212ENST00000443253 ATF5Q9Y2D1 282 aaPredicted RBP12.8□□□□□ -0.36
BBX-212ENST00000443253 OSCARQ8IYS5 282 aa12.77□□□□□ -0.37
BBX-212ENST00000443253 HAX1O00165 279 aa12.76□□□□□ -0.37
BBX-212ENST00000443253 PITPNM1O00562 1244 aa12.72□□□□□ -0.37
BBX-212ENST00000443253 FXR2P51116 673 aaKnown RBP eCLIP12.7□□□□□ -0.38
BBX-212ENST00000443253 FOXD4L1Q9NU39 408 aa12.68□□□□□ -0.38
BBX-212ENST00000443253 SLC4A1APQ9BWU0 796 aaKnown RBP12.58□□□□□ -0.4
BBX-212ENST00000443253 EVX2Q03828 476 aa12.55□□□□□ -0.4
BBX-212ENST00000443253 SPDYE2BA6NHP3 402 aa12.42□□□□□ -0.42
BBX-212ENST00000443253 SPDYE6P0CI01 402 aa12.42□□□□□ -0.42
BBX-212ENST00000443253 SPDYE2Q495Y8 402 aa12.42□□□□□ -0.42
BBX-212ENST00000443253 PRKAR2AP13861 404 aaKnown RBP12.4□□□□□ -0.42
BBX-212ENST00000443253 CLEC11AQ9Y240 323 aa12.36□□□□□ -0.43
BBX-212ENST00000443253 FBLN2P98095 1184 aa12.35□□□□□ -0.43
BBX-212ENST00000443253 SPDYE1Q8NFV5 336 aaPredicted RBP12.33□□□□□ -0.44
BBX-212ENST00000443253 ZBTB22O15209 634 aa12.32□□□□□ -0.44
BBX-212ENST00000443253 ATXN8OSP0DMR3 200 aa12.31□□□□□ -0.44
BBX-212ENST00000443253 C19orf67A6NJJ6 358 aa12.3□□□□□ -0.44
BBX-212ENST00000443253 GABBR2O75899 941 aa12.25□□□□□ -0.45
BBX-212ENST00000443253 LHX8Q68G74 356 aa12.22□□□□□ -0.45
BBX-212ENST00000443253 ZNF692Q9BU19 519 aaPredicted RBP12.2□□□□□ -0.46
BBX-212ENST00000443253 SSUH2Q9Y2M2 353 aa12.19□□□□□ -0.46
BBX-212ENST00000443253 MKRN4PQ13434 485 aaPredicted RBP12.18□□□□□ -0.46
BBX-212ENST00000443253 CHADLQ6NUI6 762 aa12.16□□□□□ -0.46
BBX-212ENST00000443253 PRR29P0C7W0 189 aa12.07□□□□□ -0.48
BBX-212ENST00000443253 PABPN1Q86U42 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
BBX-212ENST00000443253 POTEIP0CG38 1075 aa11.98□□□□□ -0.49
BBX-212ENST00000443253 CD44P16070 742 aaKnown RBP11.98□□□□□ -0.49
BBX-212ENST00000443253 FARP1Q9Y4F1 1045 aaPredicted RBP11.91□□□□□ -0.5
BBX-212ENST00000443253 CLCN6P51797 869 aa11.88□□□□□ -0.51
BBX-212ENST00000443253 PLSCR2Q9NRY7 297 aa11.86□□□□□ -0.51
BBX-212ENST00000443253 DCBLD2Q96PD2 775 aa11.83□□□□□ -0.52
BBX-212ENST00000443253 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
BBX-212ENST00000443253 ZRANB1Q9UGI0 708 aa11.74□□□□□ -0.53
BBX-212ENST00000443253 GALR2O43603 387 aaPredicted RBP11.65□□□□□ -0.54
BBX-212ENST00000443253 CREBZFQ9NS37 354 aa11.64□□□□□ -0.55
BBX-212ENST00000443253 OTUD5Q96G74 571 aa11.63□□□□□ -0.55
BBX-212ENST00000443253 POTEB2H3BUK9 544 aa11.58□□□□□ -0.56
BBX-212ENST00000443253 STAG3Q9UJ98 1225 aa11.58□□□□□ -0.56
BBX-212ENST00000443253 PAK3O75914 559 aaPredicted RBP11.55□□□□□ -0.56
BBX-212ENST00000443253 POTEMA6NI47 508 aa11.54□□□□□ -0.56
BBX-212ENST00000443253 PHF12Q96QT6 1004 aa11.53□□□□□ -0.56
BBX-212ENST00000443253 POTEGQ6S5H5 508 aa11.49□□□□□ -0.57
BBX-212ENST00000443253 PELP1Q8IZL8 1130 aaKnown RBP11.46□□□□□ -0.57
BBX-212ENST00000443253 NPM1P06748 294 aaKnown RBP eCLIP11.43□□□□□ -0.58
BBX-212ENST00000443253 METRNQ9UJH8 293 aa11.39□□□□□ -0.59
BBX-212ENST00000443253 SPDYE4A6NLX3 237 aa11.38□□□□□ -0.59
BBX-212ENST00000443253 MNX1P50219 401 aaPredicted RBP11.37□□□□□ -0.59
BBX-212ENST00000443253 ASTLQ6HA08 431 aaPredicted RBP11.36□□□□□ -0.59
BBX-212ENST00000443253 MS4A3Q96HJ5 214 aa11.36□□□□□ -0.59
BBX-212ENST00000443253 PCDH10Q9P2E7 1040 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms