RNA–Protein interactions for RNA: ENST00000443238.5

CHN1-208, Transcript of chimerin 1, humanhuman

TSL 4

Gene CHN1, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHN1-208ENST00000443238 AEBP2Q6ZN18 517 aaPredicted RBP33.05■■■□□ 2.88
CHN1-208ENST00000443238 CHIC1Q5VXU3 224 aa31.56■■■□□ 2.64
CHN1-208ENST00000443238 SENP3Q9H4L4 574 aaPredicted RBP28.04■■■□□ 2.08
CHN1-208ENST00000443238 PHF23Q9BUL5 403 aaPredicted RBP27.78■■■□□ 2.04
CHN1-208ENST00000443238 FOXD1Q16676 465 aa26.19■■□□□ 1.78
CHN1-208ENST00000443238 PLPPR3Q6T4P5 718 aa25.29■■□□□ 1.64
CHN1-208ENST00000443238 PPP6R1Q9UPN7 881 aa24.73■■□□□ 1.55
CHN1-208ENST00000443238 ADRA2BP18089 450 aa24.65■■□□□ 1.54
CHN1-208ENST00000443238 PIAS4Q8N2W9 510 aaPredicted RBP24.5■■□□□ 1.51
CHN1-208ENST00000443238 MSH5O43196 834 aa24.32■■□□□ 1.48
CHN1-208ENST00000443238 POTEDQ86YR6 584 aa23.39■■□□□ 1.33
CHN1-208ENST00000443238 MAPK8IP2Q13387 824 aaPredicted RBP22.6■■□□□ 1.21
CHN1-208ENST00000443238 SCAF1Q9H7N4 1312 aaKnown RBP22.42■■□□□ 1.18
CHN1-208ENST00000443238 DMRT2Q9Y5R5 561 aa22.3■■□□□ 1.16
CHN1-208ENST00000443238 PPP4R3CPQ6ZMV5 832 aa22.25■■□□□ 1.15
CHN1-208ENST00000443238 CNKSR2Q8WXI2 1034 aa21.73■■□□□ 1.07
CHN1-208ENST00000443238 HOXD11P31277 338 aaPredicted RBP21.58■■□□□ 1.05
CHN1-208ENST00000443238 RNF216Q9NWF9 866 aaPredicted RBP21.47■■□□□ 1.03
CHN1-208ENST00000443238 DCAF8L1A6NGE4 600 aa21.4■■□□□ 1.02
CHN1-208ENST00000443238 NCBP3Q53F19 620 aaKnown RBP21.4■■□□□ 1.02
CHN1-208ENST00000443238 NPM3O75607 178 aaKnown RBP21.17■□□□□ 0.98
CHN1-208ENST00000443238 KCNA4P22459 653 aa21.01■□□□□ 0.95
CHN1-208ENST00000443238 RNF39Q9H2S5 420 aa20.83■□□□□ 0.93
CHN1-208ENST00000443238 CACNB1Q02641 598 aaPredicted RBP20.76■□□□□ 0.91
CHN1-208ENST00000443238 DNAJC5BQ9UF47 199 aa20.71■□□□□ 0.91
CHN1-208ENST00000443238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.57■□□□□ 0.88
CHN1-208ENST00000443238 C1QBPQ07021 282 aaKnown RBP20.49■□□□□ 0.87
CHN1-208ENST00000443238 SLC4A2P04920 1241 aa20.18■□□□□ 0.82
CHN1-208ENST00000443238 U3KPZ7 1027 aaPredicted RBP20.18■□□□□ 0.82
CHN1-208ENST00000443238 SPINK5Q9NQ38 1064 aaPredicted RBP19.86■□□□□ 0.77
CHN1-208ENST00000443238 SLC4A1APQ9BWU0 796 aaKnown RBP19.84■□□□□ 0.77
CHN1-208ENST00000443238 CAPN15O75808 1086 aa19.76■□□□□ 0.75
CHN1-208ENST00000443238 DSG3P32926 999 aa19.6■□□□□ 0.73
CHN1-208ENST00000443238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.59■□□□□ 0.73
CHN1-208ENST00000443238 HNRNPUL2Q1KMD3 747 aaKnown RBP19.59■□□□□ 0.73
CHN1-208ENST00000443238 SAMD1Q6SPF0 538 aaPredicted RBP19.53■□□□□ 0.72
CHN1-208ENST00000443238 TRHP20396 242 aaPredicted RBP19.52■□□□□ 0.72
CHN1-208ENST00000443238 MYCNP04198 464 aaPredicted RBP19.51■□□□□ 0.71
CHN1-208ENST00000443238 APLP2Q06481 763 aa19.51■□□□□ 0.71
CHN1-208ENST00000443238 FOXD4L1Q9NU39 408 aa19.46■□□□□ 0.71
CHN1-208ENST00000443238 ZNF219Q9P2Y4 722 aaPredicted RBP19.42■□□□□ 0.7
CHN1-208ENST00000443238 ABCB7O75027 752 aa19.37■□□□□ 0.69
CHN1-208ENST00000443238 ZBTB22O15209 634 aa19.36■□□□□ 0.69
CHN1-208ENST00000443238 ATF5Q9Y2D1 282 aaPredicted RBP19.17■□□□□ 0.66
CHN1-208ENST00000443238 POLA2Q14181 598 aa19.06■□□□□ 0.64
CHN1-208ENST00000443238 ATXN8OSP0DMR3 200 aa18.81■□□□□ 0.6
CHN1-208ENST00000443238 CSRNP3Q8WYN3 585 aa18.67■□□□□ 0.58
CHN1-208ENST00000443238 RBM42Q9BTD8 480 aaKnown RBP18.59■□□□□ 0.57
CHN1-208ENST00000443238 ZBTB12Q9Y330 459 aaPredicted RBP18.57■□□□□ 0.56
CHN1-208ENST00000443238 EHMT2Q96KQ7 1210 aa18.56■□□□□ 0.56
CHN1-208ENST00000443238 OSCARQ8IYS5 282 aa18.44■□□□□ 0.54
CHN1-208ENST00000443238 POTEHQ6S545 545 aa18.36■□□□□ 0.53
CHN1-208ENST00000443238 FBLN2P98095 1184 aa18.27■□□□□ 0.52
CHN1-208ENST00000443238 MKRN4PQ13434 485 aaPredicted RBP18.27■□□□□ 0.52
CHN1-208ENST00000443238 AKT1S1Q96B36 256 aa18.27■□□□□ 0.52
CHN1-208ENST00000443238 CHRDL2Q6WN34 429 aa18.17■□□□□ 0.5
CHN1-208ENST00000443238 REM2Q8IYK8 340 aaPredicted RBP18.14■□□□□ 0.49
CHN1-208ENST00000443238 SPDYE2BA6NHP3 402 aa18.07■□□□□ 0.48
CHN1-208ENST00000443238 SPDYE6P0CI01 402 aa18.07■□□□□ 0.48
CHN1-208ENST00000443238 SPDYE2Q495Y8 402 aa18.07■□□□□ 0.48
CHN1-208ENST00000443238 PITPNM1O00562 1244 aa17.95■□□□□ 0.46
CHN1-208ENST00000443238 ZNF692Q9BU19 519 aaPredicted RBP17.94■□□□□ 0.46
CHN1-208ENST00000443238 SSUH2Q9Y2M2 353 aa17.88■□□□□ 0.45
CHN1-208ENST00000443238 PIP4P2Q8N4L2 257 aa17.82■□□□□ 0.44
CHN1-208ENST00000443238 FXR2P51116 673 aaKnown RBP eCLIP17.73■□□□□ 0.43
CHN1-208ENST00000443238 CLEC11AQ9Y240 323 aa17.71■□□□□ 0.43
CHN1-208ENST00000443238 PABPN1Q86U42 306 aaKnown RBP eCLIP17.69■□□□□ 0.42
CHN1-208ENST00000443238 SPDYE1Q8NFV5 336 aaPredicted RBP17.69■□□□□ 0.42
CHN1-208ENST00000443238 SPDYE4A6NLX3 237 aa17.48■□□□□ 0.39
CHN1-208ENST00000443238 PRKAR2AP13861 404 aaKnown RBP17.48■□□□□ 0.39
CHN1-208ENST00000443238 PRR29P0C7W0 189 aa17.43■□□□□ 0.38
CHN1-208ENST00000443238 HAX1O00165 279 aa17.41■□□□□ 0.38
CHN1-208ENST00000443238 CHADLQ6NUI6 762 aa17.38■□□□□ 0.37
CHN1-208ENST00000443238 SP7Q8TDD2 431 aaPredicted RBP17.32■□□□□ 0.36
CHN1-208ENST00000443238 EVX2Q03828 476 aa17.3■□□□□ 0.36
CHN1-208ENST00000443238 STAG3Q9UJ98 1225 aa17.18■□□□□ 0.34
CHN1-208ENST00000443238 C19orf67A6NJJ6 358 aa17.15■□□□□ 0.34
CHN1-208ENST00000443238 FARP1Q9Y4F1 1045 aaPredicted RBP17.11■□□□□ 0.33
CHN1-208ENST00000443238 PROM2Q8N271 834 aa17.1■□□□□ 0.33
CHN1-208ENST00000443238 CREBZFQ9NS37 354 aa17.09■□□□□ 0.33
CHN1-208ENST00000443238 CD44P16070 742 aaKnown RBP16.93■□□□□ 0.3
CHN1-208ENST00000443238 FKBP8Q14318 412 aa16.89■□□□□ 0.29
CHN1-208ENST00000443238 GABBR2O75899 941 aa16.86■□□□□ 0.29
CHN1-208ENST00000443238 MNX1P50219 401 aaPredicted RBP16.84■□□□□ 0.29
CHN1-208ENST00000443238 ZRANB1Q9UGI0 708 aa16.75■□□□□ 0.27
CHN1-208ENST00000443238 NPM1P06748 294 aaKnown RBP eCLIP16.71■□□□□ 0.27
CHN1-208ENST00000443238 MIER1Q8N108 512 aa16.66■□□□□ 0.26
CHN1-208ENST00000443238 ZNF579Q8NAF0 562 aaKnown RBP16.66■□□□□ 0.26
CHN1-208ENST00000443238 PAK3O75914 559 aaPredicted RBP16.58■□□□□ 0.24
CHN1-208ENST00000443238 CLCN6P51797 869 aa16.56■□□□□ 0.24
CHN1-208ENST00000443238 PHF12Q96QT6 1004 aa16.56■□□□□ 0.24
CHN1-208ENST00000443238 POTEIP0CG38 1075 aa16.54■□□□□ 0.24
CHN1-208ENST00000443238 PLCD3Q8N3E9 789 aa16.54■□□□□ 0.24
CHN1-208ENST00000443238 PLEKHG5O94827 1062 aa16.53■□□□□ 0.24
CHN1-208ENST00000443238 GALR2O43603 387 aaPredicted RBP16.5■□□□□ 0.23
CHN1-208ENST00000443238 TSPYL2Q9H2G4 693 aaPredicted RBP16.49■□□□□ 0.23
CHN1-208ENST00000443238 RASEFQ8IZ41 740 aa16.42■□□□□ 0.22
CHN1-208ENST00000443238 DCBLD2Q96PD2 775 aa16.42■□□□□ 0.22
CHN1-208ENST00000443238 FBXO3Q9UK99 471 aa16.39■□□□□ 0.21
CHN1-208ENST00000443238 CCDC61Q9Y6R9 512 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms