RNA–Protein interactions for RNA: ENST00000442974.1

LRP1B-204, Transcript of LDL receptor related protein 1B, humanhuman

TSL 5

Gene LRP1B, Length 839 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1B-204ENST00000442974 AEBP2Q6ZN18 517 aaPredicted RBP31.31■■■□□ 2.6
LRP1B-204ENST00000442974 CHIC1Q5VXU3 224 aa30.05■■■□□ 2.4
LRP1B-204ENST00000442974 SENP3Q9H4L4 574 aaPredicted RBP26.69■■□□□ 1.86
LRP1B-204ENST00000442974 PHF23Q9BUL5 403 aaPredicted RBP26.38■■□□□ 1.81
LRP1B-204ENST00000442974 FOXD1Q16676 465 aa24.82■■□□□ 1.56
LRP1B-204ENST00000442974 PLPPR3Q6T4P5 718 aa24.16■■□□□ 1.46
LRP1B-204ENST00000442974 PPP6R1Q9UPN7 881 aa23.44■■□□□ 1.34
LRP1B-204ENST00000442974 ADRA2BP18089 450 aa23.37■■□□□ 1.33
LRP1B-204ENST00000442974 PIAS4Q8N2W9 510 aaPredicted RBP23.25■■□□□ 1.31
LRP1B-204ENST00000442974 MSH5O43196 834 aa23.14■■□□□ 1.29
LRP1B-204ENST00000442974 POTEDQ86YR6 584 aa22.03■■□□□ 1.12
LRP1B-204ENST00000442974 SCAF1Q9H7N4 1312 aaKnown RBP21.43■■□□□ 1.02
LRP1B-204ENST00000442974 MAPK8IP2Q13387 824 aaPredicted RBP21.38■■□□□ 1.01
LRP1B-204ENST00000442974 DMRT2Q9Y5R5 561 aa21.21■□□□□ 0.99
LRP1B-204ENST00000442974 PPP4R3CPQ6ZMV5 832 aa21.2■□□□□ 0.98
LRP1B-204ENST00000442974 CNKSR2Q8WXI2 1034 aa20.75■□□□□ 0.91
LRP1B-204ENST00000442974 HOXD11P31277 338 aaPredicted RBP20.56■□□□□ 0.88
LRP1B-204ENST00000442974 NCBP3Q53F19 620 aaKnown RBP20.51■□□□□ 0.87
LRP1B-204ENST00000442974 RNF216Q9NWF9 866 aaPredicted RBP20.5■□□□□ 0.87
LRP1B-204ENST00000442974 DCAF8L1A6NGE4 600 aa20.27■□□□□ 0.84
LRP1B-204ENST00000442974 NPM3O75607 178 aaKnown RBP20.18■□□□□ 0.82
LRP1B-204ENST00000442974 KCNA4P22459 653 aa20.05■□□□□ 0.8
LRP1B-204ENST00000442974 DNAJC5BQ9UF47 199 aa19.84■□□□□ 0.77
LRP1B-204ENST00000442974 RNF39Q9H2S5 420 aa19.76■□□□□ 0.75
LRP1B-204ENST00000442974 CACNB1Q02641 598 aaPredicted RBP19.64■□□□□ 0.73
LRP1B-204ENST00000442974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.57■□□□□ 0.72
LRP1B-204ENST00000442974 C1QBPQ07021 282 aaKnown RBP19.51■□□□□ 0.71
LRP1B-204ENST00000442974 SLC4A2P04920 1241 aa19.2■□□□□ 0.66
LRP1B-204ENST00000442974 U3KPZ7 1027 aaPredicted RBP19.19■□□□□ 0.66
LRP1B-204ENST00000442974 SLC4A1APQ9BWU0 796 aaKnown RBP19■□□□□ 0.63
LRP1B-204ENST00000442974 SPINK5Q9NQ38 1064 aaPredicted RBP18.81■□□□□ 0.6
LRP1B-204ENST00000442974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.79■□□□□ 0.6
LRP1B-204ENST00000442974 HNRNPUL2Q1KMD3 747 aaKnown RBP18.79■□□□□ 0.6
LRP1B-204ENST00000442974 CAPN15O75808 1086 aa18.76■□□□□ 0.59
LRP1B-204ENST00000442974 APLP2Q06481 763 aa18.72■□□□□ 0.59
LRP1B-204ENST00000442974 SAMD1Q6SPF0 538 aaPredicted RBP18.69■□□□□ 0.58
LRP1B-204ENST00000442974 MYCNP04198 464 aaPredicted RBP18.67■□□□□ 0.58
LRP1B-204ENST00000442974 FOXD4L1Q9NU39 408 aa18.64■□□□□ 0.57
LRP1B-204ENST00000442974 DSG3P32926 999 aa18.6■□□□□ 0.57
LRP1B-204ENST00000442974 ZNF219Q9P2Y4 722 aaPredicted RBP18.54■□□□□ 0.56
LRP1B-204ENST00000442974 TRHP20396 242 aaPredicted RBP18.53■□□□□ 0.56
LRP1B-204ENST00000442974 ZBTB22O15209 634 aa18.43■□□□□ 0.54
LRP1B-204ENST00000442974 ABCB7O75027 752 aa18.34■□□□□ 0.53
LRP1B-204ENST00000442974 ATF5Q9Y2D1 282 aaPredicted RBP18.18■□□□□ 0.5
LRP1B-204ENST00000442974 POLA2Q14181 598 aa18.12■□□□□ 0.49
LRP1B-204ENST00000442974 ATXN8OSP0DMR3 200 aa18.07■□□□□ 0.48
LRP1B-204ENST00000442974 CSRNP3Q8WYN3 585 aa17.88■□□□□ 0.45
LRP1B-204ENST00000442974 ZBTB12Q9Y330 459 aaPredicted RBP17.8■□□□□ 0.44
LRP1B-204ENST00000442974 EHMT2Q96KQ7 1210 aa17.77■□□□□ 0.44
LRP1B-204ENST00000442974 RBM42Q9BTD8 480 aaKnown RBP17.76■□□□□ 0.43
LRP1B-204ENST00000442974 OSCARQ8IYS5 282 aa17.51■□□□□ 0.39
LRP1B-204ENST00000442974 FBLN2P98095 1184 aa17.49■□□□□ 0.39
LRP1B-204ENST00000442974 AKT1S1Q96B36 256 aa17.42■□□□□ 0.38
LRP1B-204ENST00000442974 MKRN4PQ13434 485 aaPredicted RBP17.38■□□□□ 0.37
LRP1B-204ENST00000442974 POTEHQ6S545 545 aa17.33■□□□□ 0.36
LRP1B-204ENST00000442974 SPDYE2BA6NHP3 402 aa17.28■□□□□ 0.36
LRP1B-204ENST00000442974 SPDYE6P0CI01 402 aa17.28■□□□□ 0.36
LRP1B-204ENST00000442974 SPDYE2Q495Y8 402 aa17.28■□□□□ 0.36
LRP1B-204ENST00000442974 REM2Q8IYK8 340 aaPredicted RBP17.24■□□□□ 0.35
LRP1B-204ENST00000442974 CHRDL2Q6WN34 429 aa17.23■□□□□ 0.35
LRP1B-204ENST00000442974 ZNF692Q9BU19 519 aaPredicted RBP17.11■□□□□ 0.33
LRP1B-204ENST00000442974 SSUH2Q9Y2M2 353 aa17.08■□□□□ 0.32
LRP1B-204ENST00000442974 PITPNM1O00562 1244 aa17.03■□□□□ 0.32
LRP1B-204ENST00000442974 SPDYE1Q8NFV5 336 aaPredicted RBP16.9■□□□□ 0.3
LRP1B-204ENST00000442974 PIP4P2Q8N4L2 257 aa16.88■□□□□ 0.29
LRP1B-204ENST00000442974 FXR2P51116 673 aaKnown RBP eCLIP16.86■□□□□ 0.29
LRP1B-204ENST00000442974 PABPN1Q86U42 306 aaKnown RBP eCLIP16.85■□□□□ 0.29
LRP1B-204ENST00000442974 CLEC11AQ9Y240 323 aa16.82■□□□□ 0.28
LRP1B-204ENST00000442974 SPDYE4A6NLX3 237 aa16.72■□□□□ 0.27
LRP1B-204ENST00000442974 PRR29P0C7W0 189 aa16.61■□□□□ 0.25
LRP1B-204ENST00000442974 PRKAR2AP13861 404 aaKnown RBP16.6■□□□□ 0.25
LRP1B-204ENST00000442974 STAG3Q9UJ98 1225 aa16.5■□□□□ 0.23
LRP1B-204ENST00000442974 HAX1O00165 279 aa16.49■□□□□ 0.23
LRP1B-204ENST00000442974 CHADLQ6NUI6 762 aa16.46■□□□□ 0.23
LRP1B-204ENST00000442974 SP7Q8TDD2 431 aaPredicted RBP16.4■□□□□ 0.22
LRP1B-204ENST00000442974 PROM2Q8N271 834 aa16.39■□□□□ 0.21
LRP1B-204ENST00000442974 C19orf67A6NJJ6 358 aa16.3■□□□□ 0.2
LRP1B-204ENST00000442974 EVX2Q03828 476 aa16.3■□□□□ 0.2
LRP1B-204ENST00000442974 FARP1Q9Y4F1 1045 aaPredicted RBP16.28■□□□□ 0.2
LRP1B-204ENST00000442974 CREBZFQ9NS37 354 aa16.27■□□□□ 0.2
LRP1B-204ENST00000442974 FKBP8Q14318 412 aa16.18■□□□□ 0.18
LRP1B-204ENST00000442974 CD44P16070 742 aaKnown RBP16.09■□□□□ 0.17
LRP1B-204ENST00000442974 MNX1P50219 401 aaPredicted RBP16.04■□□□□ 0.16
LRP1B-204ENST00000442974 NPM1P06748 294 aaKnown RBP eCLIP16■□□□□ 0.15
LRP1B-204ENST00000442974 GABBR2O75899 941 aa15.97■□□□□ 0.15
LRP1B-204ENST00000442974 MIER1Q8N108 512 aa15.92■□□□□ 0.14
LRP1B-204ENST00000442974 ZRANB1Q9UGI0 708 aa15.91■□□□□ 0.14
LRP1B-204ENST00000442974 PLEKHG5O94827 1062 aa15.9■□□□□ 0.14
LRP1B-204ENST00000442974 CLCN6P51797 869 aa15.89■□□□□ 0.13
LRP1B-204ENST00000442974 ZNF579Q8NAF0 562 aaKnown RBP15.88■□□□□ 0.13
LRP1B-204ENST00000442974 PAK3O75914 559 aaPredicted RBP15.86■□□□□ 0.13
LRP1B-204ENST00000442974 PLCD3Q8N3E9 789 aa15.82■□□□□ 0.12
LRP1B-204ENST00000442974 FBXO3Q9UK99 471 aa15.81■□□□□ 0.12
LRP1B-204ENST00000442974 ZBTB47Q9UFB7 747 aaPredicted RBP15.72■□□□□ 0.11
LRP1B-204ENST00000442974 PHF12Q96QT6 1004 aa15.7■□□□□ 0.1
LRP1B-204ENST00000442974 TSPYL2Q9H2G4 693 aaPredicted RBP15.68■□□□□ 0.1
LRP1B-204ENST00000442974 GALR2O43603 387 aaPredicted RBP15.64■□□□□ 0.09
LRP1B-204ENST00000442974 RASEFQ8IZ41 740 aa15.63■□□□□ 0.09
LRP1B-204ENST00000442974 POTEIP0CG38 1075 aa15.62■□□□□ 0.09
LRP1B-204ENST00000442974 CCDC61Q9Y6R9 512 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms