RNA–Protein interactions for RNA: ENST00000442858.1

BBS9-209, Transcript of Bardet-Biedl syndrome 9, humanhuman

TSL 4

Gene BBS9, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS9-209ENST00000442858 AEBP2Q6ZN18 517 aaPredicted RBP19.7■□□□□ 0.74
BBS9-209ENST00000442858 CHIC1Q5VXU3 224 aa19.66■□□□□ 0.74
BBS9-209ENST00000442858 PHF23Q9BUL5 403 aaPredicted RBP17.44■□□□□ 0.38
BBS9-209ENST00000442858 SENP3Q9H4L4 574 aaPredicted RBP16.48■□□□□ 0.23
BBS9-209ENST00000442858 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
BBS9-209ENST00000442858 FOXD1Q16676 465 aa15.34■□□□□ 0.05
BBS9-209ENST00000442858 ADRA2BP18089 450 aa15.26■□□□□ 0.03
BBS9-209ENST00000442858 PPP6R1Q9UPN7 881 aa15.24■□□□□ 0.03
BBS9-209ENST00000442858 KCNA4P22459 653 aa14.66□□□□□ -0.06
BBS9-209ENST00000442858 PIAS4Q8N2W9 510 aaPredicted RBP14.54□□□□□ -0.08
BBS9-209ENST00000442858 PPP4R3CPQ6ZMV5 832 aa14.36□□□□□ -0.11
BBS9-209ENST00000442858 EHMT2Q96KQ7 1210 aa14.25□□□□□ -0.13
BBS9-209ENST00000442858 NCBP3Q53F19 620 aaKnown RBP14.04□□□□□ -0.16
BBS9-209ENST00000442858 SLC4A1APQ9BWU0 796 aaKnown RBP14□□□□□ -0.17
BBS9-209ENST00000442858 NPM3O75607 178 aaKnown RBP13.93□□□□□ -0.18
BBS9-209ENST00000442858 CSRNP3Q8WYN3 585 aa13.86□□□□□ -0.19
BBS9-209ENST00000442858 MSH5O43196 834 aa13.81□□□□□ -0.2
BBS9-209ENST00000442858 CNKSR2Q8WXI2 1034 aa13.79□□□□□ -0.2
BBS9-209ENST00000442858 SCAF1Q9H7N4 1312 aaKnown RBP13.78□□□□□ -0.2
BBS9-209ENST00000442858 MAPK8IP2Q13387 824 aaPredicted RBP13.7□□□□□ -0.22
BBS9-209ENST00000442858 ZBTB22O15209 634 aa13.53□□□□□ -0.24
BBS9-209ENST00000442858 RNF216Q9NWF9 866 aaPredicted RBP13.39□□□□□ -0.27
BBS9-209ENST00000442858 DNAJC5BQ9UF47 199 aa13.37□□□□□ -0.27
BBS9-209ENST00000442858 DMRT2Q9Y5R5 561 aa13.27□□□□□ -0.29
BBS9-209ENST00000442858 FOXD4L1Q9NU39 408 aa13.25□□□□□ -0.29
BBS9-209ENST00000442858 HOXD11P31277 338 aaPredicted RBP13.21□□□□□ -0.29
BBS9-209ENST00000442858 SLC4A2P04920 1241 aa13.07□□□□□ -0.32
BBS9-209ENST00000442858 MYCNP04198 464 aaPredicted RBP12.79□□□□□ -0.36
BBS9-209ENST00000442858 ATXN8OSP0DMR3 200 aa12.71□□□□□ -0.37
BBS9-209ENST00000442858 DCAF8L1A6NGE4 600 aa12.69□□□□□ -0.38
BBS9-209ENST00000442858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.59□□□□□ -0.39
BBS9-209ENST00000442858 ATF5Q9Y2D1 282 aaPredicted RBP12.55□□□□□ -0.4
BBS9-209ENST00000442858 U3KPZ7 1027 aaPredicted RBP12.48□□□□□ -0.41
BBS9-209ENST00000442858 FKBP8Q14318 412 aa12.46□□□□□ -0.41
BBS9-209ENST00000442858 SAMD1Q6SPF0 538 aaPredicted RBP12.38□□□□□ -0.43
BBS9-209ENST00000442858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.37□□□□□ -0.43
BBS9-209ENST00000442858 HNRNPUL2Q1KMD3 747 aaKnown RBP12.37□□□□□ -0.43
BBS9-209ENST00000442858 RTN4Q9NQC3 1192 aaKnown RBP12.3□□□□□ -0.44
BBS9-209ENST00000442858 AMER1Q5JTC6 1135 aaPredicted RBP12.2□□□□□ -0.46
BBS9-209ENST00000442858 ZNF219Q9P2Y4 722 aaPredicted RBP12.2□□□□□ -0.46
BBS9-209ENST00000442858 APLP2Q06481 763 aa12.08□□□□□ -0.48
BBS9-209ENST00000442858 SPINK5Q9NQ38 1064 aaPredicted RBP12.01□□□□□ -0.49
BBS9-209ENST00000442858 MKRN4PQ13434 485 aaPredicted RBP12□□□□□ -0.49
BBS9-209ENST00000442858 TRHP20396 242 aaPredicted RBP11.98□□□□□ -0.49
BBS9-209ENST00000442858 RNF39Q9H2S5 420 aa11.96□□□□□ -0.49
BBS9-209ENST00000442858 SPDYE4A6NLX3 237 aa11.92□□□□□ -0.5
BBS9-209ENST00000442858 POLA2Q14181 598 aa11.91□□□□□ -0.5
BBS9-209ENST00000442858 SLC24A1O60721 1099 aa11.89□□□□□ -0.51
BBS9-209ENST00000442858 CAPN15O75808 1086 aa11.88□□□□□ -0.51
BBS9-209ENST00000442858 FBLN2P98095 1184 aa11.83□□□□□ -0.52
BBS9-209ENST00000442858 PROM2Q8N271 834 aa11.8□□□□□ -0.52
BBS9-209ENST00000442858 C1QBPQ07021 282 aaKnown RBP11.79□□□□□ -0.52
BBS9-209ENST00000442858 FBXO3Q9UK99 471 aa11.78□□□□□ -0.52
BBS9-209ENST00000442858 POTEDQ86YR6 584 aa11.76□□□□□ -0.53
BBS9-209ENST00000442858 ABCB7O75027 752 aa11.75□□□□□ -0.53
BBS9-209ENST00000442858 VASPP50552 380 aaPredicted RBP11.66□□□□□ -0.54
BBS9-209ENST00000442858 ZBTB12Q9Y330 459 aaPredicted RBP11.61□□□□□ -0.55
BBS9-209ENST00000442858 IFNLR1Q8IU57 520 aaPredicted RBP11.6□□□□□ -0.55
BBS9-209ENST00000442858 DSG3P32926 999 aa11.58□□□□□ -0.56
BBS9-209ENST00000442858 ZNF692Q9BU19 519 aaPredicted RBP11.49□□□□□ -0.57
BBS9-209ENST00000442858 OSCARQ8IYS5 282 aa11.46□□□□□ -0.57
BBS9-209ENST00000442858 PKD2Q13563 968 aa11.42□□□□□ -0.58
BBS9-209ENST00000442858 SPDYE2BA6NHP3 402 aa11.4□□□□□ -0.58
BBS9-209ENST00000442858 SPDYE6P0CI01 402 aa11.4□□□□□ -0.58
BBS9-209ENST00000442858 SPDYE2Q495Y8 402 aa11.4□□□□□ -0.58
BBS9-209ENST00000442858 SSUH2Q9Y2M2 353 aa11.4□□□□□ -0.58
BBS9-209ENST00000442858 PABPN1Q86U42 306 aaKnown RBP eCLIP11.36□□□□□ -0.59
BBS9-209ENST00000442858 KLHL34Q8N239 644 aa11.35□□□□□ -0.59
BBS9-209ENST00000442858 DCAF8L2P0C7V8 631 aa11.33□□□□□ -0.6
BBS9-209ENST00000442858 STAG3Q9UJ98 1225 aa11.33□□□□□ -0.6
BBS9-209ENST00000442858 PLCB2Q00722 1185 aa11.31□□□□□ -0.6
BBS9-209ENST00000442858 SPOCK2Q92563 424 aa11.31□□□□□ -0.6
BBS9-209ENST00000442858 PLCD3Q8N3E9 789 aa11.28□□□□□ -0.6
BBS9-209ENST00000442858 MIER1Q8N108 512 aa11.27□□□□□ -0.61
BBS9-209ENST00000442858 CACNB1Q02641 598 aaPredicted RBP11.26□□□□□ -0.61
BBS9-209ENST00000442858 ECM2O94769 699 aaPredicted RBP11.21□□□□□ -0.61
BBS9-209ENST00000442858 HAP1P54257 671 aaPredicted RBP11.16□□□□□ -0.62
BBS9-209ENST00000442858 NPM1P06748 294 aaKnown RBP eCLIP11.15□□□□□ -0.62
BBS9-209ENST00000442858 RGL2O15211 777 aa11.13□□□□□ -0.63
BBS9-209ENST00000442858 BBXQ8WY36 941 aaPredicted RBP11.07□□□□□ -0.64
BBS9-209ENST00000442858 CIZ1Q9ULV3 898 aaPredicted RBP11.07□□□□□ -0.64
BBS9-209ENST00000442858 PLEKHG5O94827 1062 aa11.04□□□□□ -0.64
BBS9-209ENST00000442858 ZBTB47Q9UFB7 747 aaPredicted RBP11.03□□□□□ -0.64
BBS9-209ENST00000442858 PAXIP1Q6ZW49 1069 aaPredicted RBP11.01□□□□□ -0.65
BBS9-209ENST00000442858 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.01□□□□□ -0.65
BBS9-209ENST00000442858 CFAP44Q96MT7 982 aa10.99□□□□□ -0.65
BBS9-209ENST00000442858 VSIG10Q8N0Z9 540 aa10.98□□□□□ -0.65
BBS9-209ENST00000442858 KDM2AQ9Y2K7 1162 aa10.95□□□□□ -0.66
BBS9-209ENST00000442858 CHGAP10645 457 aaKnown RBP10.94□□□□□ -0.66
BBS9-209ENST00000442858 NUBP1P53384 320 aa10.94□□□□□ -0.66
BBS9-209ENST00000442858 AKT1S1Q96B36 256 aa10.94□□□□□ -0.66
BBS9-209ENST00000442858 SPDYE1Q8NFV5 336 aaPredicted RBP10.93□□□□□ -0.66
BBS9-209ENST00000442858 CLEC11AQ9Y240 323 aa10.92□□□□□ -0.66
BBS9-209ENST00000442858 SPRYD3Q8NCJ5 442 aa10.9□□□□□ -0.66
BBS9-209ENST00000442858 RBM42Q9BTD8 480 aaKnown RBP10.9□□□□□ -0.66
BBS9-209ENST00000442858 CREBZFQ9NS37 354 aa10.9□□□□□ -0.66
BBS9-209ENST00000442858 RNF25Q96BH1 459 aaPredicted RBP10.89□□□□□ -0.67
BBS9-209ENST00000442858 REM2Q8IYK8 340 aaPredicted RBP10.88□□□□□ -0.67
BBS9-209ENST00000442858 TRIM41Q8WV44 630 aa10.88□□□□□ -0.67
BBS9-209ENST00000442858 PRR29P0C7W0 189 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms