RNA–Protein interactions for RNA: ENST00000441084.1

YIPF4-203, Transcript of Yip1 domain family member 4, humanhuman

TSL 3

Gene YIPF4, Length 312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-203ENST00000441084 AEBP2Q6ZN18 517 aaPredicted RBP22.72■■□□□ 1.23
YIPF4-203ENST00000441084 CHIC1Q5VXU3 224 aa21.21■□□□□ 0.99
YIPF4-203ENST00000441084 SENP3Q9H4L4 574 aaPredicted RBP19.34■□□□□ 0.69
YIPF4-203ENST00000441084 PHF23Q9BUL5 403 aaPredicted RBP19.04■□□□□ 0.64
YIPF4-203ENST00000441084 FOXD1Q16676 465 aa18.12■□□□□ 0.49
YIPF4-203ENST00000441084 POTEDQ86YR6 584 aa17.22■□□□□ 0.35
YIPF4-203ENST00000441084 MSH5O43196 834 aa17.01■□□□□ 0.31
YIPF4-203ENST00000441084 PIAS4Q8N2W9 510 aaPredicted RBP16.81■□□□□ 0.28
YIPF4-203ENST00000441084 PLPPR3Q6T4P5 718 aa16.74■□□□□ 0.27
YIPF4-203ENST00000441084 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
YIPF4-203ENST00000441084 ADRA2BP18089 450 aa16.6■□□□□ 0.25
YIPF4-203ENST00000441084 MAPK8IP2Q13387 824 aaPredicted RBP15.35■□□□□ 0.05
YIPF4-203ENST00000441084 DMRT2Q9Y5R5 561 aa15.32■□□□□ 0.04
YIPF4-203ENST00000441084 SCAF1Q9H7N4 1312 aaKnown RBP15.07■□□□□ 0
YIPF4-203ENST00000441084 CACNB1Q02641 598 aaPredicted RBP14.77□□□□□ -0.05
YIPF4-203ENST00000441084 PPP4R3CPQ6ZMV5 832 aa14.65□□□□□ -0.06
YIPF4-203ENST00000441084 HOXD11P31277 338 aaPredicted RBP14.64□□□□□ -0.07
YIPF4-203ENST00000441084 DCAF8L1A6NGE4 600 aa14.61□□□□□ -0.07
YIPF4-203ENST00000441084 RNF39Q9H2S5 420 aa14.54□□□□□ -0.08
YIPF4-203ENST00000441084 CNKSR2Q8WXI2 1034 aa14.44□□□□□ -0.1
YIPF4-203ENST00000441084 RNF216Q9NWF9 866 aaPredicted RBP14.4□□□□□ -0.1
YIPF4-203ENST00000441084 C1QBPQ07021 282 aaKnown RBP14.26□□□□□ -0.13
YIPF4-203ENST00000441084 DNAJC5BQ9UF47 199 aa14.18□□□□□ -0.14
YIPF4-203ENST00000441084 NCBP3Q53F19 620 aaKnown RBP13.91□□□□□ -0.18
YIPF4-203ENST00000441084 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.85□□□□□ -0.19
YIPF4-203ENST00000441084 NPM3O75607 178 aaKnown RBP13.83□□□□□ -0.2
YIPF4-203ENST00000441084 U3KPZ7 1027 aaPredicted RBP13.63□□□□□ -0.23
YIPF4-203ENST00000441084 SPINK5Q9NQ38 1064 aaPredicted RBP13.52□□□□□ -0.25
YIPF4-203ENST00000441084 DSG3P32926 999 aa13.51□□□□□ -0.25
YIPF4-203ENST00000441084 CAPN15O75808 1086 aa13.43□□□□□ -0.26
YIPF4-203ENST00000441084 POTEHQ6S545 545 aa13.41□□□□□ -0.26
YIPF4-203ENST00000441084 SLC4A2P04920 1241 aa13.32□□□□□ -0.28
YIPF4-203ENST00000441084 KCNA4P22459 653 aa13.28□□□□□ -0.28
YIPF4-203ENST00000441084 ABCB7O75027 752 aa13.14□□□□□ -0.31
YIPF4-203ENST00000441084 TRHP20396 242 aaPredicted RBP13.14□□□□□ -0.31
YIPF4-203ENST00000441084 ZNF219Q9P2Y4 722 aaPredicted RBP13.11□□□□□ -0.31
YIPF4-203ENST00000441084 APLP2Q06481 763 aa13.07□□□□□ -0.32
YIPF4-203ENST00000441084 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13□□□□□ -0.33
YIPF4-203ENST00000441084 HNRNPUL2Q1KMD3 747 aaKnown RBP13□□□□□ -0.33
YIPF4-203ENST00000441084 SAMD1Q6SPF0 538 aaPredicted RBP12.94□□□□□ -0.34
YIPF4-203ENST00000441084 RBM42Q9BTD8 480 aaKnown RBP12.82□□□□□ -0.36
YIPF4-203ENST00000441084 MYCNP04198 464 aaPredicted RBP12.76□□□□□ -0.37
YIPF4-203ENST00000441084 POLA2Q14181 598 aa12.73□□□□□ -0.37
YIPF4-203ENST00000441084 CHRDL2Q6WN34 429 aa12.71□□□□□ -0.37
YIPF4-203ENST00000441084 ATF5Q9Y2D1 282 aaPredicted RBP12.56□□□□□ -0.4
YIPF4-203ENST00000441084 AKT1S1Q96B36 256 aa12.48□□□□□ -0.41
YIPF4-203ENST00000441084 FOXD4L1Q9NU39 408 aa12.45□□□□□ -0.42
YIPF4-203ENST00000441084 SP7Q8TDD2 431 aaPredicted RBP12.41□□□□□ -0.42
YIPF4-203ENST00000441084 SLC4A1APQ9BWU0 796 aaKnown RBP12.41□□□□□ -0.42
YIPF4-203ENST00000441084 ZBTB12Q9Y330 459 aaPredicted RBP12.41□□□□□ -0.42
YIPF4-203ENST00000441084 OSCARQ8IYS5 282 aa12.39□□□□□ -0.43
YIPF4-203ENST00000441084 REM2Q8IYK8 340 aaPredicted RBP12.38□□□□□ -0.43
YIPF4-203ENST00000441084 PIP4P2Q8N4L2 257 aa12.36□□□□□ -0.43
YIPF4-203ENST00000441084 PITPNM1O00562 1244 aa12.29□□□□□ -0.44
YIPF4-203ENST00000441084 ZBTB22O15209 634 aa12.26□□□□□ -0.45
YIPF4-203ENST00000441084 FXR2P51116 673 aaKnown RBP eCLIP12.23□□□□□ -0.45
YIPF4-203ENST00000441084 HAX1O00165 279 aa12.14□□□□□ -0.47
YIPF4-203ENST00000441084 EVX2Q03828 476 aa12.09□□□□□ -0.47
YIPF4-203ENST00000441084 ATXN8OSP0DMR3 200 aa12.08□□□□□ -0.48
YIPF4-203ENST00000441084 SPDYE2BA6NHP3 402 aa12.04□□□□□ -0.48
YIPF4-203ENST00000441084 SPDYE6P0CI01 402 aa12.04□□□□□ -0.48
YIPF4-203ENST00000441084 SPDYE2Q495Y8 402 aa12.04□□□□□ -0.48
YIPF4-203ENST00000441084 MKRN4PQ13434 485 aaPredicted RBP11.97□□□□□ -0.49
YIPF4-203ENST00000441084 FBLN2P98095 1184 aa11.96□□□□□ -0.49
YIPF4-203ENST00000441084 PRKAR2AP13861 404 aaKnown RBP11.92□□□□□ -0.5
YIPF4-203ENST00000441084 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
YIPF4-203ENST00000441084 SPDYE1Q8NFV5 336 aaPredicted RBP11.89□□□□□ -0.51
YIPF4-203ENST00000441084 CLEC11AQ9Y240 323 aa11.87□□□□□ -0.51
YIPF4-203ENST00000441084 C19orf67A6NJJ6 358 aa11.86□□□□□ -0.51
YIPF4-203ENST00000441084 ZNF692Q9BU19 519 aaPredicted RBP11.81□□□□□ -0.52
YIPF4-203ENST00000441084 GABBR2O75899 941 aa11.74□□□□□ -0.53
YIPF4-203ENST00000441084 CHADLQ6NUI6 762 aa11.74□□□□□ -0.53
YIPF4-203ENST00000441084 PABPN1Q86U42 306 aaKnown RBP eCLIP11.66□□□□□ -0.54
YIPF4-203ENST00000441084 PRR29P0C7W0 189 aa11.61□□□□□ -0.55
YIPF4-203ENST00000441084 LHX8Q68G74 356 aa11.61□□□□□ -0.55
YIPF4-203ENST00000441084 POTEIP0CG38 1075 aa11.55□□□□□ -0.56
YIPF4-203ENST00000441084 CD44P16070 742 aaKnown RBP11.52□□□□□ -0.57
YIPF4-203ENST00000441084 FARP1Q9Y4F1 1045 aaPredicted RBP11.51□□□□□ -0.57
YIPF4-203ENST00000441084 EHMT2Q96KQ7 1210 aa11.47□□□□□ -0.57
YIPF4-203ENST00000441084 CSRNP3Q8WYN3 585 aa11.38□□□□□ -0.59
YIPF4-203ENST00000441084 CLCN6P51797 869 aa11.37□□□□□ -0.59
YIPF4-203ENST00000441084 ZNF579Q8NAF0 562 aaKnown RBP11.37□□□□□ -0.59
YIPF4-203ENST00000441084 CREBZFQ9NS37 354 aa11.34□□□□□ -0.59
YIPF4-203ENST00000441084 DCBLD2Q96PD2 775 aa11.29□□□□□ -0.6
YIPF4-203ENST00000441084 ZRANB1Q9UGI0 708 aa11.29□□□□□ -0.6
YIPF4-203ENST00000441084 GALR2O43603 387 aaPredicted RBP11.26□□□□□ -0.61
YIPF4-203ENST00000441084 STAG3Q9UJ98 1225 aa11.21□□□□□ -0.61
YIPF4-203ENST00000441084 POTEB2H3BUK9 544 aa11.17□□□□□ -0.62
YIPF4-203ENST00000441084 OTUD5Q96G74 571 aa11.16□□□□□ -0.62
YIPF4-203ENST00000441084 SPDYE4A6NLX3 237 aa11.15□□□□□ -0.62
YIPF4-203ENST00000441084 MNX1P50219 401 aaPredicted RBP11.15□□□□□ -0.62
YIPF4-203ENST00000441084 PHF12Q96QT6 1004 aa11.15□□□□□ -0.62
YIPF4-203ENST00000441084 PLSCR2Q9NRY7 297 aa11.09□□□□□ -0.63
YIPF4-203ENST00000441084 PELP1Q8IZL8 1130 aaKnown RBP11.08□□□□□ -0.64
YIPF4-203ENST00000441084 PAK3O75914 559 aaPredicted RBP11.07□□□□□ -0.64
YIPF4-203ENST00000441084 NPM1P06748 294 aaKnown RBP eCLIP11.02□□□□□ -0.65
YIPF4-203ENST00000441084 ASTLQ6HA08 431 aaPredicted RBP11□□□□□ -0.65
YIPF4-203ENST00000441084 MS4A3Q96HJ5 214 aa11□□□□□ -0.65
YIPF4-203ENST00000441084 POTEJP0CG39 1038 aa10.97□□□□□ -0.65
YIPF4-203ENST00000441084 POTEMA6NI47 508 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms