RNA–Protein interactions for RNA: ENST00000437952.1

UFM1-203, Transcript of ubiquitin fold modifier 1, humanhuman

TSL 3

Gene UFM1, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-203ENST00000437952 AEBP2Q6ZN18 517 aaPredicted RBP24.66■■□□□ 1.54
UFM1-203ENST00000437952 CHIC1Q5VXU3 224 aa24.2■■□□□ 1.46
UFM1-203ENST00000437952 PHF23Q9BUL5 403 aaPredicted RBP21.35■■□□□ 1.01
UFM1-203ENST00000437952 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
UFM1-203ENST00000437952 PLPPR3Q6T4P5 718 aa19.69■□□□□ 0.74
UFM1-203ENST00000437952 FOXD1Q16676 465 aa19.37■□□□□ 0.69
UFM1-203ENST00000437952 PPP6R1Q9UPN7 881 aa18.79■□□□□ 0.6
UFM1-203ENST00000437952 ADRA2BP18089 450 aa18.77■□□□□ 0.6
UFM1-203ENST00000437952 PIAS4Q8N2W9 510 aaPredicted RBP18.27■□□□□ 0.52
UFM1-203ENST00000437952 POTEDQ86YR6 584 aa18.24■□□□□ 0.51
UFM1-203ENST00000437952 MSH5O43196 834 aa17.74■□□□□ 0.43
UFM1-203ENST00000437952 PPP4R3CPQ6ZMV5 832 aa17.4■□□□□ 0.38
UFM1-203ENST00000437952 KCNA4P22459 653 aa17.2■□□□□ 0.34
UFM1-203ENST00000437952 SCAF1Q9H7N4 1312 aaKnown RBP17.09■□□□□ 0.33
UFM1-203ENST00000437952 MAPK8IP2Q13387 824 aaPredicted RBP16.99■□□□□ 0.31
UFM1-203ENST00000437952 NCBP3Q53F19 620 aaKnown RBP16.95■□□□□ 0.3
UFM1-203ENST00000437952 CNKSR2Q8WXI2 1034 aa16.86■□□□□ 0.29
UFM1-203ENST00000437952 NPM3O75607 178 aaKnown RBP16.76■□□□□ 0.27
UFM1-203ENST00000437952 DMRT2Q9Y5R5 561 aa16.68■□□□□ 0.26
UFM1-203ENST00000437952 RNF216Q9NWF9 866 aaPredicted RBP16.49■□□□□ 0.23
UFM1-203ENST00000437952 HOXD11P31277 338 aaPredicted RBP16.4■□□□□ 0.22
UFM1-203ENST00000437952 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
UFM1-203ENST00000437952 DNAJC5BQ9UF47 199 aa16.23■□□□□ 0.19
UFM1-203ENST00000437952 EHMT2Q96KQ7 1210 aa16.09■□□□□ 0.17
UFM1-203ENST00000437952 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
UFM1-203ENST00000437952 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
UFM1-203ENST00000437952 ZBTB22O15209 634 aa15.85■□□□□ 0.13
UFM1-203ENST00000437952 SLC4A2P04920 1241 aa15.81■□□□□ 0.12
UFM1-203ENST00000437952 FOXD4L1Q9NU39 408 aa15.74■□□□□ 0.11
UFM1-203ENST00000437952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.6■□□□□ 0.095e-10■□□□□ 10.2
UFM1-203ENST00000437952 MYCNP04198 464 aaPredicted RBP15.44■□□□□ 0.06
UFM1-203ENST00000437952 U3KPZ7 1027 aaPredicted RBP15.4■□□□□ 0.06
UFM1-203ENST00000437952 RNF39Q9H2S5 420 aa15.25■□□□□ 0.03
UFM1-203ENST00000437952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
UFM1-203ENST00000437952 HNRNPUL2Q1KMD3 747 aaKnown RBP15.19■□□□□ 0.02
UFM1-203ENST00000437952 ATXN8OSP0DMR3 200 aa15.17■□□□□ 0.02
UFM1-203ENST00000437952 SAMD1Q6SPF0 538 aaPredicted RBP15.16■□□□□ 0.02
UFM1-203ENST00000437952 ATF5Q9Y2D1 282 aaPredicted RBP15.08■□□□□ 0
UFM1-203ENST00000437952 C1QBPQ07021 282 aaKnown RBP15.06■□□□□ 0
UFM1-203ENST00000437952 APLP2Q06481 763 aa14.98□□□□□ -0.01
UFM1-203ENST00000437952 SPINK5Q9NQ38 1064 aaPredicted RBP14.94□□□□□ -0.02
UFM1-203ENST00000437952 CACNB1Q02641 598 aaPredicted RBP14.93□□□□□ -0.02
UFM1-203ENST00000437952 CAPN15O75808 1086 aa14.83□□□□□ -0.04
UFM1-203ENST00000437952 TRHP20396 242 aaPredicted RBP14.81□□□□□ -0.04
UFM1-203ENST00000437952 ZNF219Q9P2Y4 722 aaPredicted RBP14.8□□□□□ -0.04
UFM1-203ENST00000437952 POLA2Q14181 598 aa14.63□□□□□ -0.07
UFM1-203ENST00000437952 ABCB7O75027 752 aa14.59□□□□□ -0.07
UFM1-203ENST00000437952 DSG3P32926 999 aa14.57□□□□□ -0.08
UFM1-203ENST00000437952 MKRN4PQ13434 485 aaPredicted RBP14.43□□□□□ -0.1
UFM1-203ENST00000437952 FBLN2P98095 1184 aa14.36□□□□□ -0.11
UFM1-203ENST00000437952 ZBTB12Q9Y330 459 aaPredicted RBP14.33□□□□□ -0.12
UFM1-203ENST00000437952 FKBP8Q14318 412 aa14.31□□□□□ -0.12
UFM1-203ENST00000437952 SPDYE4A6NLX3 237 aa14.14□□□□□ -0.15
UFM1-203ENST00000437952 OSCARQ8IYS5 282 aa14.11□□□□□ -0.15
UFM1-203ENST00000437952 POTEHQ6S545 545 aa14.03□□□□□ -0.16
UFM1-203ENST00000437952 SPDYE2BA6NHP3 402 aa13.98□□□□□ -0.17
UFM1-203ENST00000437952 SPDYE6P0CI01 402 aa13.98□□□□□ -0.17
UFM1-203ENST00000437952 SPDYE2Q495Y8 402 aa13.98□□□□□ -0.17
UFM1-203ENST00000437952 ZNF692Q9BU19 519 aaPredicted RBP13.97□□□□□ -0.17
UFM1-203ENST00000437952 PROM2Q8N271 834 aa13.95□□□□□ -0.18
UFM1-203ENST00000437952 SSUH2Q9Y2M2 353 aa13.92□□□□□ -0.18
UFM1-203ENST00000437952 RBM42Q9BTD8 480 aaKnown RBP13.82□□□□□ -0.2
UFM1-203ENST00000437952 PABPN1Q86U42 306 aaKnown RBP eCLIP13.8□□□□□ -0.2
UFM1-203ENST00000437952 AKT1S1Q96B36 256 aa13.72□□□□□ -0.21
UFM1-203ENST00000437952 FBXO3Q9UK99 471 aa13.72□□□□□ -0.21
UFM1-203ENST00000437952 REM2Q8IYK8 340 aaPredicted RBP13.61□□□□□ -0.23
UFM1-203ENST00000437952 VASPP50552 380 aaPredicted RBP13.56□□□□□ -0.24
UFM1-203ENST00000437952 STAG3Q9UJ98 1225 aa13.56□□□□□ -0.24
UFM1-203ENST00000437952 SPDYE1Q8NFV5 336 aaPredicted RBP13.53□□□□□ -0.24
UFM1-203ENST00000437952 CLEC11AQ9Y240 323 aa13.47□□□□□ -0.25
UFM1-203ENST00000437952 PITPNM1O00562 1244 aa13.46□□□□□ -0.25
UFM1-203ENST00000437952 IFNLR1Q8IU57 520 aaPredicted RBP13.42□□□□□ -0.26
UFM1-203ENST00000437952 MIER1Q8N108 512 aa13.39□□□□□ -0.27
UFM1-203ENST00000437952 PRR29P0C7W0 189 aa13.37□□□□□ -0.27
UFM1-203ENST00000437952 PLCD3Q8N3E9 789 aa13.37□□□□□ -0.27
UFM1-203ENST00000437952 RTN4Q9NQC3 1192 aaKnown RBP13.3□□□□□ -0.28
UFM1-203ENST00000437952 AMER1Q5JTC6 1135 aaPredicted RBP13.28□□□□□ -0.28
UFM1-203ENST00000437952 KLHL34Q8N239 644 aa13.27□□□□□ -0.29
UFM1-203ENST00000437952 CREBZFQ9NS37 354 aa13.27□□□□□ -0.29
UFM1-203ENST00000437952 PLEKHG5O94827 1062 aa13.24□□□□□ -0.29
UFM1-203ENST00000437952 CHRDL2Q6WN34 429 aa13.23□□□□□ -0.29
UFM1-203ENST00000437952 SPOCK2Q92563 424 aa13.19□□□□□ -0.3
UFM1-203ENST00000437952 ZBTB47Q9UFB7 747 aaPredicted RBP13.18□□□□□ -0.3
UFM1-203ENST00000437952 MNX1P50219 401 aaPredicted RBP13.17□□□□□ -0.3
UFM1-203ENST00000437952 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.3
UFM1-203ENST00000437952 CHADLQ6NUI6 762 aa13.16□□□□□ -0.3
UFM1-203ENST00000437952 PRKAR2AP13861 404 aaKnown RBP13.11□□□□□ -0.31
UFM1-203ENST00000437952 PIP4P2Q8N4L2 257 aa13.11□□□□□ -0.31
UFM1-203ENST00000437952 NUBP1P53384 320 aa13.06□□□□□ -0.32
UFM1-203ENST00000437952 FARP1Q9Y4F1 1045 aaPredicted RBP13.04□□□□□ -0.32
UFM1-203ENST00000437952 PKD2Q13563 968 aa13.03□□□□□ -0.32
UFM1-203ENST00000437952 NPM1P06748 294 aaKnown RBP eCLIP13□□□□□ -0.33
UFM1-203ENST00000437952 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
UFM1-203ENST00000437952 CIZ1Q9ULV3 898 aaPredicted RBP12.96□□□□□ -0.33
UFM1-203ENST00000437952 DCAF8Q5TAQ9 597 aa12.91□□□□□ -0.34
UFM1-203ENST00000437952 GSE1Q14687 1217 aa12.9□□□□□ -0.34
UFM1-203ENST00000437952 FAM212AQ96EL1 285 aa12.9□□□□□ -0.34
UFM1-203ENST00000437952 ECM2O94769 699 aaPredicted RBP12.89□□□□□ -0.35
UFM1-203ENST00000437952 TSPYL2Q9H2G4 693 aaPredicted RBP12.84□□□□□ -0.35
UFM1-203ENST00000437952 TRIM41Q8WV44 630 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 727.2 ms