RNA–Protein interactions for RNA: ENST00000437765.1

YIPF4-202, Transcript of Yip1 domain family member 4, humanhuman

TSL 5

Gene YIPF4, Length 728 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-202ENST00000437765 AEBP2Q6ZN18 517 aaPredicted RBP27.51■■□□□ 1.99
YIPF4-202ENST00000437765 CHIC1Q5VXU3 224 aa26.72■■□□□ 1.87
YIPF4-202ENST00000437765 PHF23Q9BUL5 403 aaPredicted RBP23.61■■□□□ 1.37
YIPF4-202ENST00000437765 SENP3Q9H4L4 574 aaPredicted RBP23.17■■□□□ 1.3
YIPF4-202ENST00000437765 FOXD1Q16676 465 aa21.62■■□□□ 1.05
YIPF4-202ENST00000437765 PLPPR3Q6T4P5 718 aa21.6■■□□□ 1.05
YIPF4-202ENST00000437765 PPP6R1Q9UPN7 881 aa20.83■□□□□ 0.93
YIPF4-202ENST00000437765 ADRA2BP18089 450 aa20.75■□□□□ 0.91
YIPF4-202ENST00000437765 PIAS4Q8N2W9 510 aaPredicted RBP20.28■□□□□ 0.84
YIPF4-202ENST00000437765 MSH5O43196 834 aa19.82■□□□□ 0.76
YIPF4-202ENST00000437765 PPP4R3CPQ6ZMV5 832 aa19.08■□□□□ 0.64
YIPF4-202ENST00000437765 MAPK8IP2Q13387 824 aaPredicted RBP18.87■□□□□ 0.61
YIPF4-202ENST00000437765 SCAF1Q9H7N4 1312 aaKnown RBP18.79■□□□□ 0.6
YIPF4-202ENST00000437765 KCNA4P22459 653 aa18.64■□□□□ 0.57
YIPF4-202ENST00000437765 DMRT2Q9Y5R5 561 aa18.55■□□□□ 0.56
YIPF4-202ENST00000437765 CNKSR2Q8WXI2 1034 aa18.52■□□□□ 0.56
YIPF4-202ENST00000437765 NCBP3Q53F19 620 aaKnown RBP18.44■□□□□ 0.54
YIPF4-202ENST00000437765 NPM3O75607 178 aaKnown RBP18.33■□□□□ 0.52
YIPF4-202ENST00000437765 POTEDQ86YR6 584 aa18.23■□□□□ 0.51
YIPF4-202ENST00000437765 RNF216Q9NWF9 866 aaPredicted RBP18.18■□□□□ 0.5
YIPF4-202ENST00000437765 HOXD11P31277 338 aaPredicted RBP18.17■□□□□ 0.5
YIPF4-202ENST00000437765 DNAJC5BQ9UF47 199 aa17.83■□□□□ 0.44
YIPF4-202ENST00000437765 SLC4A1APQ9BWU0 796 aaKnown RBP17.65■□□□□ 0.42
YIPF4-202ENST00000437765 DCAF8L1A6NGE4 600 aa17.62■□□□□ 0.41
YIPF4-202ENST00000437765 SLC4A2P04920 1241 aa17.38■□□□□ 0.37
YIPF4-202ENST00000437765 ZBTB22O15209 634 aa17.23■□□□□ 0.35
YIPF4-202ENST00000437765 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.349e-7■■■■□ 22.1
YIPF4-202ENST00000437765 EHMT2Q96KQ7 1210 aa17.11■□□□□ 0.33
YIPF4-202ENST00000437765 FOXD4L1Q9NU39 408 aa17.1■□□□□ 0.33
YIPF4-202ENST00000437765 RNF39Q9H2S5 420 aa17.07■□□□□ 0.32
YIPF4-202ENST00000437765 U3KPZ7 1027 aaPredicted RBP17.05■□□□□ 0.32
YIPF4-202ENST00000437765 CSRNP3Q8WYN3 585 aa17.04■□□□□ 0.32
YIPF4-202ENST00000437765 MYCNP04198 464 aaPredicted RBP16.85■□□□□ 0.29
YIPF4-202ENST00000437765 C1QBPQ07021 282 aaKnown RBP16.79■□□□□ 0.28
YIPF4-202ENST00000437765 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.62■□□□□ 0.25
YIPF4-202ENST00000437765 HNRNPUL2Q1KMD3 747 aaKnown RBP16.62■□□□□ 0.25
YIPF4-202ENST00000437765 SAMD1Q6SPF0 538 aaPredicted RBP16.61■□□□□ 0.25
YIPF4-202ENST00000437765 SPINK5Q9NQ38 1064 aaPredicted RBP16.58■□□□□ 0.24
YIPF4-202ENST00000437765 ATF5Q9Y2D1 282 aaPredicted RBP16.56■□□□□ 0.24
YIPF4-202ENST00000437765 CACNB1Q02641 598 aaPredicted RBP16.55■□□□□ 0.24
YIPF4-202ENST00000437765 ATXN8OSP0DMR3 200 aa16.48■□□□□ 0.23
YIPF4-202ENST00000437765 APLP2Q06481 763 aa16.41■□□□□ 0.22
YIPF4-202ENST00000437765 CAPN15O75808 1086 aa16.4■□□□□ 0.22
YIPF4-202ENST00000437765 TRHP20396 242 aaPredicted RBP16.32■□□□□ 0.2
YIPF4-202ENST00000437765 ZNF219Q9P2Y4 722 aaPredicted RBP16.29■□□□□ 0.2
YIPF4-202ENST00000437765 DSG3P32926 999 aa16.24■□□□□ 0.19
YIPF4-202ENST00000437765 ABCB7O75027 752 aa16.14■□□□□ 0.17
YIPF4-202ENST00000437765 POLA2Q14181 598 aa16.09■□□□□ 0.17
YIPF4-202ENST00000437765 MKRN4PQ13434 485 aaPredicted RBP15.83■□□□□ 0.12
YIPF4-202ENST00000437765 ZBTB12Q9Y330 459 aaPredicted RBP15.7■□□□□ 0.1
YIPF4-202ENST00000437765 FBLN2P98095 1184 aa15.63■□□□□ 0.09
YIPF4-202ENST00000437765 OSCARQ8IYS5 282 aa15.57■□□□□ 0.08
YIPF4-202ENST00000437765 SPDYE2BA6NHP3 402 aa15.36■□□□□ 0.05
YIPF4-202ENST00000437765 SPDYE6P0CI01 402 aa15.36■□□□□ 0.05
YIPF4-202ENST00000437765 SPDYE2Q495Y8 402 aa15.36■□□□□ 0.05
YIPF4-202ENST00000437765 SPDYE4A6NLX3 237 aa15.32■□□□□ 0.04
YIPF4-202ENST00000437765 RBM42Q9BTD8 480 aaKnown RBP15.32■□□□□ 0.04
YIPF4-202ENST00000437765 SSUH2Q9Y2M2 353 aa15.32■□□□□ 0.04
YIPF4-202ENST00000437765 FKBP8Q14318 412 aa15.31■□□□□ 0.04
YIPF4-202ENST00000437765 ZNF692Q9BU19 519 aaPredicted RBP15.28■□□□□ 0.04
YIPF4-202ENST00000437765 AKT1S1Q96B36 256 aa15.2■□□□□ 0.02
YIPF4-202ENST00000437765 PROM2Q8N271 834 aa15.18■□□□□ 0.02
YIPF4-202ENST00000437765 PABPN1Q86U42 306 aaKnown RBP eCLIP15.1■□□□□ 0.01
YIPF4-202ENST00000437765 REM2Q8IYK8 340 aaPredicted RBP15.09■□□□□ 0.01
YIPF4-202ENST00000437765 PITPNM1O00562 1244 aa14.94□□□□□ -0.02
YIPF4-202ENST00000437765 SPDYE1Q8NFV5 336 aaPredicted RBP14.88□□□□□ -0.03
YIPF4-202ENST00000437765 CLEC11AQ9Y240 323 aa14.81□□□□□ -0.04
YIPF4-202ENST00000437765 CHRDL2Q6WN34 429 aa14.78□□□□□ -0.04
YIPF4-202ENST00000437765 STAG3Q9UJ98 1225 aa14.76□□□□□ -0.05
YIPF4-202ENST00000437765 PRR29P0C7W0 189 aa14.68□□□□□ -0.06
YIPF4-202ENST00000437765 FXR2P51116 673 aaKnown RBP eCLIP14.68□□□□□ -0.06
YIPF4-202ENST00000437765 FBXO3Q9UK99 471 aa14.68□□□□□ -0.06
YIPF4-202ENST00000437765 PIP4P2Q8N4L2 257 aa14.64□□□□□ -0.07
YIPF4-202ENST00000437765 CREBZFQ9NS37 354 aa14.6□□□□□ -0.07
YIPF4-202ENST00000437765 VASPP50552 380 aaPredicted RBP14.58□□□□□ -0.08
YIPF4-202ENST00000437765 CHADLQ6NUI6 762 aa14.56□□□□□ -0.08
YIPF4-202ENST00000437765 PRKAR2AP13861 404 aaKnown RBP14.52□□□□□ -0.09
YIPF4-202ENST00000437765 MNX1P50219 401 aaPredicted RBP14.5□□□□□ -0.09
YIPF4-202ENST00000437765 MIER1Q8N108 512 aa14.48□□□□□ -0.09
YIPF4-202ENST00000437765 IFNLR1Q8IU57 520 aaPredicted RBP14.45□□□□□ -0.1
YIPF4-202ENST00000437765 PLCD3Q8N3E9 789 aa14.43□□□□□ -0.1
YIPF4-202ENST00000437765 POTEHQ6S545 545 aa14.38□□□□□ -0.11
YIPF4-202ENST00000437765 FARP1Q9Y4F1 1045 aaPredicted RBP14.38□□□□□ -0.11
YIPF4-202ENST00000437765 PLEKHG5O94827 1062 aa14.28□□□□□ -0.12
YIPF4-202ENST00000437765 NUBP1P53384 320 aa14.25□□□□□ -0.13
YIPF4-202ENST00000437765 KLHL34Q8N239 644 aa14.24□□□□□ -0.13
YIPF4-202ENST00000437765 ZBTB47Q9UFB7 747 aaPredicted RBP14.23□□□□□ -0.13
YIPF4-202ENST00000437765 NPM1P06748 294 aaKnown RBP eCLIP14.2□□□□□ -0.14
YIPF4-202ENST00000437765 RASEFQ8IZ41 740 aa14.19□□□□□ -0.14
YIPF4-202ENST00000437765 C19orf67A6NJJ6 358 aa14.18□□□□□ -0.14
YIPF4-202ENST00000437765 SPOCK2Q92563 424 aa14.18□□□□□ -0.14
YIPF4-202ENST00000437765 EVX2Q03828 476 aa14.15□□□□□ -0.14
YIPF4-202ENST00000437765 HAX1O00165 279 aa14.08□□□□□ -0.16
YIPF4-202ENST00000437765 CD44P16070 742 aaKnown RBP14.08□□□□□ -0.16
YIPF4-202ENST00000437765 TSPYL2Q9H2G4 693 aaPredicted RBP14.04□□□□□ -0.16
YIPF4-202ENST00000437765 CCDC61Q9Y6R9 512 aa14.01□□□□□ -0.17
YIPF4-202ENST00000437765 FAM212AQ96EL1 285 aa13.99□□□□□ -0.17
YIPF4-202ENST00000437765 ZRANB1Q9UGI0 708 aa13.99□□□□□ -0.17
YIPF4-202ENST00000437765 PKD2Q13563 968 aa13.97□□□□□ -0.17
YIPF4-202ENST00000437765 DCAF8Q5TAQ9 597 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms