RNA–Protein interactions for RNA: ENST00000436570.2

CCDC196-205, Transcript of coiled-coil domain containing 196, humanhuman

TSL 2

Gene CCDC196, Length 445 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-205ENST00000436570 AEBP2Q6ZN18 517 aaPredicted RBP20.13■□□□□ 0.81
CCDC196-205ENST00000436570 CHIC1Q5VXU3 224 aa18.75■□□□□ 0.59
CCDC196-205ENST00000436570 SENP3Q9H4L4 574 aaPredicted RBP17.01■□□□□ 0.31
CCDC196-205ENST00000436570 PHF23Q9BUL5 403 aaPredicted RBP16.86■□□□□ 0.29
CCDC196-205ENST00000436570 FOXD1Q16676 465 aa16.03■□□□□ 0.16
CCDC196-205ENST00000436570 POTEDQ86YR6 584 aa15.14■□□□□ 0.01
CCDC196-205ENST00000436570 MSH5O43196 834 aa14.92□□□□□ -0.02
CCDC196-205ENST00000436570 PPP6R1Q9UPN7 881 aa14.88□□□□□ -0.03
CCDC196-205ENST00000436570 PIAS4Q8N2W9 510 aaPredicted RBP14.86□□□□□ -0.03
CCDC196-205ENST00000436570 PLPPR3Q6T4P5 718 aa14.8□□□□□ -0.04
CCDC196-205ENST00000436570 ADRA2BP18089 450 aa14.79□□□□□ -0.04
CCDC196-205ENST00000436570 MAPK8IP2Q13387 824 aaPredicted RBP13.71□□□□□ -0.21
CCDC196-205ENST00000436570 DMRT2Q9Y5R5 561 aa13.5□□□□□ -0.25
CCDC196-205ENST00000436570 SCAF1Q9H7N4 1312 aaKnown RBP13.29□□□□□ -0.28
CCDC196-205ENST00000436570 CACNB1Q02641 598 aaPredicted RBP13.04□□□□□ -0.32
CCDC196-205ENST00000436570 PPP4R3CPQ6ZMV5 832 aa13.03□□□□□ -0.32
CCDC196-205ENST00000436570 DCAF8L1A6NGE4 600 aa13.01□□□□□ -0.33
CCDC196-205ENST00000436570 HOXD11P31277 338 aaPredicted RBP12.9□□□□□ -0.34
CCDC196-205ENST00000436570 RNF39Q9H2S5 420 aa12.8□□□□□ -0.36
CCDC196-205ENST00000436570 CNKSR2Q8WXI2 1034 aa12.76□□□□□ -0.37
CCDC196-205ENST00000436570 RNF216Q9NWF9 866 aaPredicted RBP12.7□□□□□ -0.38
CCDC196-205ENST00000436570 C1QBPQ07021 282 aaKnown RBP12.52□□□□□ -0.41
CCDC196-205ENST00000436570 DNAJC5BQ9UF47 199 aa12.36□□□□□ -0.43
CCDC196-205ENST00000436570 NCBP3Q53F19 620 aaKnown RBP12.31□□□□□ -0.44
CCDC196-205ENST00000436570 NPM3O75607 178 aaKnown RBP12.29□□□□□ -0.44
CCDC196-205ENST00000436570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCDC196-205ENST00000436570 U3KPZ7 1027 aaPredicted RBP12.07□□□□□ -0.48
CCDC196-205ENST00000436570 SPINK5Q9NQ38 1064 aaPredicted RBP12.02□□□□□ -0.49
CCDC196-205ENST00000436570 DSG3P32926 999 aa11.93□□□□□ -0.5
CCDC196-205ENST00000436570 CAPN15O75808 1086 aa11.92□□□□□ -0.5
CCDC196-205ENST00000436570 KCNA4P22459 653 aa11.89□□□□□ -0.51
CCDC196-205ENST00000436570 SLC4A2P04920 1241 aa11.85□□□□□ -0.51
CCDC196-205ENST00000436570 POTEHQ6S545 545 aa11.77□□□□□ -0.53
CCDC196-205ENST00000436570 ABCB7O75027 752 aa11.7□□□□□ -0.54
CCDC196-205ENST00000436570 TRHP20396 242 aaPredicted RBP11.7□□□□□ -0.54
CCDC196-205ENST00000436570 ZNF219Q9P2Y4 722 aaPredicted RBP11.53□□□□□ -0.56
CCDC196-205ENST00000436570 APLP2Q06481 763 aa11.44□□□□□ -0.58
CCDC196-205ENST00000436570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.43□□□□□ -0.58
CCDC196-205ENST00000436570 HNRNPUL2Q1KMD3 747 aaKnown RBP11.43□□□□□ -0.58
CCDC196-205ENST00000436570 SAMD1Q6SPF0 538 aaPredicted RBP11.41□□□□□ -0.58
CCDC196-205ENST00000436570 POLA2Q14181 598 aa11.33□□□□□ -0.6
CCDC196-205ENST00000436570 MYCNP04198 464 aaPredicted RBP11.27□□□□□ -0.61
CCDC196-205ENST00000436570 RBM42Q9BTD8 480 aaKnown RBP11.23□□□□□ -0.61
CCDC196-205ENST00000436570 ATF5Q9Y2D1 282 aaPredicted RBP11.23□□□□□ -0.61
CCDC196-205ENST00000436570 CHRDL2Q6WN34 429 aa11.2□□□□□ -0.62
CCDC196-205ENST00000436570 SLC4A1APQ9BWU0 796 aaKnown RBP11.09□□□□□ -0.63
CCDC196-205ENST00000436570 FOXD4L1Q9NU39 408 aa11.05□□□□□ -0.64
CCDC196-205ENST00000436570 OSCARQ8IYS5 282 aa10.99□□□□□ -0.65
CCDC196-205ENST00000436570 ZBTB22O15209 634 aa10.98□□□□□ -0.65
CCDC196-205ENST00000436570 AKT1S1Q96B36 256 aa10.98□□□□□ -0.65
CCDC196-205ENST00000436570 REM2Q8IYK8 340 aaPredicted RBP10.97□□□□□ -0.65
CCDC196-205ENST00000436570 PIP4P2Q8N4L2 257 aa10.93□□□□□ -0.66
CCDC196-205ENST00000436570 SP7Q8TDD2 431 aaPredicted RBP10.9□□□□□ -0.66
CCDC196-205ENST00000436570 ZBTB12Q9Y330 459 aaPredicted RBP10.89□□□□□ -0.67
CCDC196-205ENST00000436570 PITPNM1O00562 1244 aa10.87□□□□□ -0.67
CCDC196-205ENST00000436570 FXR2P51116 673 aaKnown RBP eCLIP10.79□□□□□ -0.68
CCDC196-205ENST00000436570 HAX1O00165 279 aa10.77□□□□□ -0.69
CCDC196-205ENST00000436570 EVX2Q03828 476 aa10.77□□□□□ -0.69
CCDC196-205ENST00000436570 MKRN4PQ13434 485 aaPredicted RBP10.66□□□□□ -0.7
CCDC196-205ENST00000436570 ATXN8OSP0DMR3 200 aa10.65□□□□□ -0.7
CCDC196-205ENST00000436570 SPDYE2BA6NHP3 402 aa10.61□□□□□ -0.71
CCDC196-205ENST00000436570 SPDYE6P0CI01 402 aa10.61□□□□□ -0.71
CCDC196-205ENST00000436570 SPDYE2Q495Y8 402 aa10.61□□□□□ -0.71
CCDC196-205ENST00000436570 FBLN2P98095 1184 aa10.58□□□□□ -0.72
CCDC196-205ENST00000436570 CLEC11AQ9Y240 323 aa10.58□□□□□ -0.72
CCDC196-205ENST00000436570 PRKAR2AP13861 404 aaKnown RBP10.57□□□□□ -0.72
CCDC196-205ENST00000436570 ZNF692Q9BU19 519 aaPredicted RBP10.5□□□□□ -0.73
CCDC196-205ENST00000436570 SSUH2Q9Y2M2 353 aa10.5□□□□□ -0.73
CCDC196-205ENST00000436570 SPDYE1Q8NFV5 336 aaPredicted RBP10.49□□□□□ -0.73
CCDC196-205ENST00000436570 CHADLQ6NUI6 762 aa10.47□□□□□ -0.73
CCDC196-205ENST00000436570 C19orf67A6NJJ6 358 aa10.45□□□□□ -0.74
CCDC196-205ENST00000436570 GABBR2O75899 941 aa10.39□□□□□ -0.75
CCDC196-205ENST00000436570 PABPN1Q86U42 306 aaKnown RBP eCLIP10.37□□□□□ -0.75
CCDC196-205ENST00000436570 PRR29P0C7W0 189 aa10.31□□□□□ -0.76
CCDC196-205ENST00000436570 POTEIP0CG38 1075 aa10.25□□□□□ -0.77
CCDC196-205ENST00000436570 LHX8Q68G74 356 aa10.25□□□□□ -0.77
CCDC196-205ENST00000436570 CSRNP3Q8WYN3 585 aa10.21□□□□□ -0.77
CCDC196-205ENST00000436570 CD44P16070 742 aaKnown RBP10.2□□□□□ -0.78
CCDC196-205ENST00000436570 FARP1Q9Y4F1 1045 aaPredicted RBP10.2□□□□□ -0.78
CCDC196-205ENST00000436570 CREBZFQ9NS37 354 aa10.07□□□□□ -0.8
CCDC196-205ENST00000436570 ZRANB1Q9UGI0 708 aa10.04□□□□□ -0.8
CCDC196-205ENST00000436570 GALR2O43603 387 aaPredicted RBP10□□□□□ -0.81
CCDC196-205ENST00000436570 ZNF579Q8NAF0 562 aaKnown RBP10□□□□□ -0.81
CCDC196-205ENST00000436570 DCBLD2Q96PD2 775 aa9.98□□□□□ -0.81
CCDC196-205ENST00000436570 SPDYE4A6NLX3 237 aa9.94□□□□□ -0.82
CCDC196-205ENST00000436570 EHMT2Q96KQ7 1210 aa9.94□□□□□ -0.82
CCDC196-205ENST00000436570 PHF12Q96QT6 1004 aa9.94□□□□□ -0.82
CCDC196-205ENST00000436570 POTEB2H3BUK9 544 aa9.93□□□□□ -0.82
CCDC196-205ENST00000436570 CLCN6P51797 869 aa9.9□□□□□ -0.82
CCDC196-205ENST00000436570 STAG3Q9UJ98 1225 aa9.89□□□□□ -0.83
CCDC196-205ENST00000436570 MNX1P50219 401 aaPredicted RBP9.88□□□□□ -0.83
CCDC196-205ENST00000436570 PELP1Q8IZL8 1130 aaKnown RBP9.87□□□□□ -0.83
CCDC196-205ENST00000436570 OTUD5Q96G74 571 aa9.87□□□□□ -0.83
CCDC196-205ENST00000436570 PLSCR2Q9NRY7 297 aa9.82□□□□□ -0.84
CCDC196-205ENST00000436570 PAK3O75914 559 aaPredicted RBP9.76□□□□□ -0.85
CCDC196-205ENST00000436570 MS4A3Q96HJ5 214 aa9.76□□□□□ -0.85
CCDC196-205ENST00000436570 POTEJP0CG39 1038 aa9.75□□□□□ -0.85
CCDC196-205ENST00000436570 NPM1P06748 294 aaKnown RBP eCLIP9.73□□□□□ -0.85
CCDC196-205ENST00000436570 ATMINO43313 823 aaPredicted RBP9.7□□□□□ -0.86
CCDC196-205ENST00000436570 TSPYL2Q9H2G4 693 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms