RNA–Protein interactions for RNA: ENST00000436377.1

LINC01641-201, Transcript of long intergenic non-protein coding RNA 1641, humanhuman

TSL 2

Gene LINC01641, Length 422 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01641-201ENST00000436377 AEBP2Q6ZN18 517 aaPredicted RBP37.06■■■■□ 3.52
LINC01641-201ENST00000436377 CHIC1Q5VXU3 224 aa35.06■■■■□ 3.2
LINC01641-201ENST00000436377 SENP3Q9H4L4 574 aaPredicted RBP31.6■■■□□ 2.65
LINC01641-201ENST00000436377 PHF23Q9BUL5 403 aaPredicted RBP31.16■■■□□ 2.58
LINC01641-201ENST00000436377 FOXD1Q16676 465 aa29.48■■■□□ 2.31
LINC01641-201ENST00000436377 PLPPR3Q6T4P5 718 aa27.92■■■□□ 2.06
LINC01641-201ENST00000436377 MSH5O43196 834 aa27.63■■■□□ 2.01
LINC01641-201ENST00000436377 PIAS4Q8N2W9 510 aaPredicted RBP27.47■■□□□ 1.99
LINC01641-201ENST00000436377 PPP6R1Q9UPN7 881 aa27.46■■□□□ 1.99
LINC01641-201ENST00000436377 ADRA2BP18089 450 aa27.34■■□□□ 1.97
LINC01641-201ENST00000436377 POTEDQ86YR6 584 aa27.19■■□□□ 1.94
LINC01641-201ENST00000436377 MAPK8IP2Q13387 824 aaPredicted RBP25.15■■□□□ 1.62
LINC01641-201ENST00000436377 DMRT2Q9Y5R5 561 aa25.06■■□□□ 1.6
LINC01641-201ENST00000436377 SCAF1Q9H7N4 1312 aaKnown RBP24.99■■□□□ 1.59
LINC01641-201ENST00000436377 PPP4R3CPQ6ZMV5 832 aa24.45■■□□□ 1.5
LINC01641-201ENST00000436377 HOXD11P31277 338 aaPredicted RBP24.11■■□□□ 1.45
LINC01641-201ENST00000436377 CNKSR2Q8WXI2 1034 aa24.03■■□□□ 1.44
LINC01641-201ENST00000436377 DCAF8L1A6NGE4 600 aa23.91■■□□□ 1.42
LINC01641-201ENST00000436377 RNF216Q9NWF9 866 aaPredicted RBP23.87■■□□□ 1.41
LINC01641-201ENST00000436377 CACNB1Q02641 598 aaPredicted RBP23.73■■□□□ 1.39
LINC01641-201ENST00000436377 RNF39Q9H2S5 420 aa23.59■■□□□ 1.37
LINC01641-201ENST00000436377 NCBP3Q53F19 620 aaKnown RBP23.45■■□□□ 1.34
LINC01641-201ENST00000436377 DNAJC5BQ9UF47 199 aa23.34■■□□□ 1.33
LINC01641-201ENST00000436377 C1QBPQ07021 282 aaKnown RBP23.22■■□□□ 1.31
LINC01641-201ENST00000436377 NPM3O75607 178 aaKnown RBP23.16■■□□□ 1.3
LINC01641-201ENST00000436377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.87■■□□□ 1.25
LINC01641-201ENST00000436377 KCNA4P22459 653 aa22.59■■□□□ 1.21
LINC01641-201ENST00000436377 U3KPZ7 1027 aaPredicted RBP22.46■■□□□ 1.19
LINC01641-201ENST00000436377 SLC4A2P04920 1241 aa22.18■■□□□ 1.14
LINC01641-201ENST00000436377 SPINK5Q9NQ38 1064 aaPredicted RBP22.14■■□□□ 1.13
LINC01641-201ENST00000436377 CAPN15O75808 1086 aa22.06■■□□□ 1.12
LINC01641-201ENST00000436377 DSG3P32926 999 aa22.03■■□□□ 1.12
LINC01641-201ENST00000436377 APLP2Q06481 763 aa21.76■■□□□ 1.07
LINC01641-201ENST00000436377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.72■■□□□ 1.07
LINC01641-201ENST00000436377 HNRNPUL2Q1KMD3 747 aaKnown RBP21.72■■□□□ 1.07
LINC01641-201ENST00000436377 ZNF219Q9P2Y4 722 aaPredicted RBP21.67■■□□□ 1.06
LINC01641-201ENST00000436377 TRHP20396 242 aaPredicted RBP21.66■■□□□ 1.06
LINC01641-201ENST00000436377 SAMD1Q6SPF0 538 aaPredicted RBP21.61■■□□□ 1.05
LINC01641-201ENST00000436377 ABCB7O75027 752 aa21.54■■□□□ 1.04
LINC01641-201ENST00000436377 MYCNP04198 464 aaPredicted RBP21.41■■□□□ 1.02
LINC01641-201ENST00000436377 SLC4A1APQ9BWU0 796 aaKnown RBP21.27■■□□□ 1
LINC01641-201ENST00000436377 POTEHQ6S545 545 aa21.26■□□□□ 0.99
LINC01641-201ENST00000436377 FOXD4L1Q9NU39 408 aa21.12■□□□□ 0.97
LINC01641-201ENST00000436377 POLA2Q14181 598 aa21.08■□□□□ 0.97
LINC01641-201ENST00000436377 RBM42Q9BTD8 480 aaKnown RBP21■□□□□ 0.95
LINC01641-201ENST00000436377 ATF5Q9Y2D1 282 aaPredicted RBP20.93■□□□□ 0.94
LINC01641-201ENST00000436377 ZBTB22O15209 634 aa20.8■□□□□ 0.92
LINC01641-201ENST00000436377 ZBTB12Q9Y330 459 aaPredicted RBP20.67■□□□□ 0.9
LINC01641-201ENST00000436377 CHRDL2Q6WN34 429 aa20.6■□□□□ 0.89
LINC01641-201ENST00000436377 ATXN8OSP0DMR3 200 aa20.51■□□□□ 0.87
LINC01641-201ENST00000436377 AKT1S1Q96B36 256 aa20.51■□□□□ 0.87
LINC01641-201ENST00000436377 OSCARQ8IYS5 282 aa20.44■□□□□ 0.86
LINC01641-201ENST00000436377 REM2Q8IYK8 340 aaPredicted RBP20.31■□□□□ 0.84
LINC01641-201ENST00000436377 PITPNM1O00562 1244 aa20.1■□□□□ 0.81
LINC01641-201ENST00000436377 PIP4P2Q8N4L2 257 aa20.09■□□□□ 0.81
LINC01641-201ENST00000436377 FBLN2P98095 1184 aa20.08■□□□□ 0.81
LINC01641-201ENST00000436377 SPDYE2BA6NHP3 402 aa20.04■□□□□ 0.8
LINC01641-201ENST00000436377 SPDYE6P0CI01 402 aa20.04■□□□□ 0.8
LINC01641-201ENST00000436377 SPDYE2Q495Y8 402 aa20.04■□□□□ 0.8
LINC01641-201ENST00000436377 MKRN4PQ13434 485 aaPredicted RBP19.99■□□□□ 0.79
LINC01641-201ENST00000436377 FXR2P51116 673 aaKnown RBP eCLIP19.97■□□□□ 0.79
LINC01641-201ENST00000436377 SP7Q8TDD2 431 aaPredicted RBP19.87■□□□□ 0.77
LINC01641-201ENST00000436377 SSUH2Q9Y2M2 353 aa19.79■□□□□ 0.76
LINC01641-201ENST00000436377 ZNF692Q9BU19 519 aaPredicted RBP19.72■□□□□ 0.75
LINC01641-201ENST00000436377 SPDYE1Q8NFV5 336 aaPredicted RBP19.7■□□□□ 0.74
LINC01641-201ENST00000436377 CSRNP3Q8WYN3 585 aa19.7■□□□□ 0.74
LINC01641-201ENST00000436377 HAX1O00165 279 aa19.69■□□□□ 0.74
LINC01641-201ENST00000436377 CLEC11AQ9Y240 323 aa19.6■□□□□ 0.73
LINC01641-201ENST00000436377 PRKAR2AP13861 404 aaKnown RBP19.54■□□□□ 0.72
LINC01641-201ENST00000436377 EVX2Q03828 476 aa19.51■□□□□ 0.71
LINC01641-201ENST00000436377 PABPN1Q86U42 306 aaKnown RBP eCLIP19.44■□□□□ 0.7
LINC01641-201ENST00000436377 C19orf67A6NJJ6 358 aa19.34■□□□□ 0.69
LINC01641-201ENST00000436377 PRR29P0C7W0 189 aa19.29■□□□□ 0.68
LINC01641-201ENST00000436377 EHMT2Q96KQ7 1210 aa19.29■□□□□ 0.68
LINC01641-201ENST00000436377 CHADLQ6NUI6 762 aa19.28■□□□□ 0.68
LINC01641-201ENST00000436377 GABBR2O75899 941 aa19.05■□□□□ 0.64
LINC01641-201ENST00000436377 FARP1Q9Y4F1 1045 aaPredicted RBP19.02■□□□□ 0.64
LINC01641-201ENST00000436377 SPDYE4A6NLX3 237 aa18.92■□□□□ 0.62
LINC01641-201ENST00000436377 CD44P16070 742 aaKnown RBP18.92■□□□□ 0.62
LINC01641-201ENST00000436377 STAG3Q9UJ98 1225 aa18.89■□□□□ 0.61
LINC01641-201ENST00000436377 CREBZFQ9NS37 354 aa18.84■□□□□ 0.61
LINC01641-201ENST00000436377 CLCN6P51797 869 aa18.72■□□□□ 0.59
LINC01641-201ENST00000436377 POTEIP0CG38 1075 aa18.68■□□□□ 0.58
LINC01641-201ENST00000436377 ZNF579Q8NAF0 562 aaKnown RBP18.68■□□□□ 0.58
LINC01641-201ENST00000436377 LHX8Q68G74 356 aa18.62■□□□□ 0.57
LINC01641-201ENST00000436377 ZRANB1Q9UGI0 708 aa18.61■□□□□ 0.57
LINC01641-201ENST00000436377 PROM2Q8N271 834 aa18.56■□□□□ 0.56
LINC01641-201ENST00000436377 MNX1P50219 401 aaPredicted RBP18.54■□□□□ 0.56
LINC01641-201ENST00000436377 DCBLD2Q96PD2 775 aa18.45■□□□□ 0.54
LINC01641-201ENST00000436377 NPM1P06748 294 aaKnown RBP eCLIP18.44■□□□□ 0.54
LINC01641-201ENST00000436377 GALR2O43603 387 aaPredicted RBP18.42■□□□□ 0.54
LINC01641-201ENST00000436377 PAK3O75914 559 aaPredicted RBP18.41■□□□□ 0.54
LINC01641-201ENST00000436377 PHF12Q96QT6 1004 aa18.38■□□□□ 0.53
LINC01641-201ENST00000436377 MS4A3Q96HJ5 214 aa18.14■□□□□ 0.49
LINC01641-201ENST00000436377 PELP1Q8IZL8 1130 aaKnown RBP18.1■□□□□ 0.49
LINC01641-201ENST00000436377 CCDC61Q9Y6R9 512 aa18.09■□□□□ 0.49
LINC01641-201ENST00000436377 TSPYL2Q9H2G4 693 aaPredicted RBP18.08■□□□□ 0.48
LINC01641-201ENST00000436377 ASTLQ6HA08 431 aaPredicted RBP18.07■□□□□ 0.48
LINC01641-201ENST00000436377 POTEB2H3BUK9 544 aa18.05■□□□□ 0.48
LINC01641-201ENST00000436377 MIER1Q8N108 512 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms