RNA–Protein interactions for RNA: ENST00000436112.1

LINC01013-202, Transcript of long intergenic non-protein coding RNA 1013, humanhuman

TSL 3

Gene LINC01013, Length 512 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01013-202ENST00000436112 AEBP2Q6ZN18 517 aaPredicted RBP16.75■□□□□ 0.27
LINC01013-202ENST00000436112 CHIC1Q5VXU3 224 aa15.75■□□□□ 0.11
LINC01013-202ENST00000436112 SENP3Q9H4L4 574 aaPredicted RBP14.38□□□□□ -0.11
LINC01013-202ENST00000436112 PHF23Q9BUL5 403 aaPredicted RBP14.08□□□□□ -0.16
LINC01013-202ENST00000436112 FOXD1Q16676 465 aa13.37□□□□□ -0.27
LINC01013-202ENST00000436112 MSH5O43196 834 aa12.67□□□□□ -0.38
LINC01013-202ENST00000436112 POTEDQ86YR6 584 aa12.66□□□□□ -0.38
LINC01013-202ENST00000436112 PLPPR3Q6T4P5 718 aa12.48□□□□□ -0.41
LINC01013-202ENST00000436112 PIAS4Q8N2W9 510 aaPredicted RBP12.38□□□□□ -0.43
LINC01013-202ENST00000436112 PPP6R1Q9UPN7 881 aa12.28□□□□□ -0.44
LINC01013-202ENST00000436112 ADRA2BP18089 450 aa12.17□□□□□ -0.46
LINC01013-202ENST00000436112 DMRT2Q9Y5R5 561 aa11.39□□□□□ -0.59
LINC01013-202ENST00000436112 SCAF1Q9H7N4 1312 aaKnown RBP11.27□□□□□ -0.61
LINC01013-202ENST00000436112 MAPK8IP2Q13387 824 aaPredicted RBP11.23□□□□□ -0.61
LINC01013-202ENST00000436112 HOXD11P31277 338 aaPredicted RBP10.92□□□□□ -0.66
LINC01013-202ENST00000436112 CACNB1Q02641 598 aaPredicted RBP10.85□□□□□ -0.67
LINC01013-202ENST00000436112 PPP4R3CPQ6ZMV5 832 aa10.84□□□□□ -0.67
LINC01013-202ENST00000436112 RNF39Q9H2S5 420 aa10.79□□□□□ -0.68
LINC01013-202ENST00000436112 CNKSR2Q8WXI2 1034 aa10.76□□□□□ -0.69
LINC01013-202ENST00000436112 DNAJC5BQ9UF47 199 aa10.76□□□□□ -0.69
LINC01013-202ENST00000436112 RNF216Q9NWF9 866 aaPredicted RBP10.75□□□□□ -0.69
LINC01013-202ENST00000436112 DCAF8L1A6NGE4 600 aa10.64□□□□□ -0.71
LINC01013-202ENST00000436112 C1QBPQ07021 282 aaKnown RBP10.64□□□□□ -0.71
LINC01013-202ENST00000436112 NCBP3Q53F19 620 aaKnown RBP10.39□□□□□ -0.75
LINC01013-202ENST00000436112 NPM3O75607 178 aaKnown RBP10.23□□□□□ -0.77
LINC01013-202ENST00000436112 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.21□□□□□ -0.77
LINC01013-202ENST00000436112 U3KPZ7 1027 aaPredicted RBP10.08□□□□□ -0.8
LINC01013-202ENST00000436112 DSG3P32926 999 aa9.99□□□□□ -0.81
LINC01013-202ENST00000436112 SPINK5Q9NQ38 1064 aaPredicted RBP9.9□□□□□ -0.82
LINC01013-202ENST00000436112 POTEHQ6S545 545 aa9.87□□□□□ -0.83
LINC01013-202ENST00000436112 CAPN15O75808 1086 aa9.85□□□□□ -0.83
LINC01013-202ENST00000436112 SLC4A2P04920 1241 aa9.84□□□□□ -0.83
LINC01013-202ENST00000436112 APLP2Q06481 763 aa9.82□□□□□ -0.84
LINC01013-202ENST00000436112 KCNA4P22459 653 aa9.78□□□□□ -0.84
LINC01013-202ENST00000436112 ZNF219Q9P2Y4 722 aaPredicted RBP9.78□□□□□ -0.84
LINC01013-202ENST00000436112 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.77□□□□□ -0.85
LINC01013-202ENST00000436112 HNRNPUL2Q1KMD3 747 aaKnown RBP9.77□□□□□ -0.85
LINC01013-202ENST00000436112 SAMD1Q6SPF0 538 aaPredicted RBP9.69□□□□□ -0.86
LINC01013-202ENST00000436112 TRHP20396 242 aaPredicted RBP9.62□□□□□ -0.87
LINC01013-202ENST00000436112 RBM42Q9BTD8 480 aaKnown RBP9.58□□□□□ -0.88
LINC01013-202ENST00000436112 ABCB7O75027 752 aa9.57□□□□□ -0.88
LINC01013-202ENST00000436112 MYCNP04198 464 aaPredicted RBP9.5□□□□□ -0.89
LINC01013-202ENST00000436112 CHRDL2Q6WN34 429 aa9.39□□□□□ -0.91
LINC01013-202ENST00000436112 POLA2Q14181 598 aa9.38□□□□□ -0.91
LINC01013-202ENST00000436112 ZBTB12Q9Y330 459 aaPredicted RBP9.32□□□□□ -0.92
LINC01013-202ENST00000436112 AKT1S1Q96B36 256 aa9.3□□□□□ -0.92
LINC01013-202ENST00000436112 FOXD4L1Q9NU39 408 aa9.27□□□□□ -0.93
LINC01013-202ENST00000436112 ATF5Q9Y2D1 282 aaPredicted RBP9.2□□□□□ -0.94
LINC01013-202ENST00000436112 SLC4A1APQ9BWU0 796 aaKnown RBP9.18□□□□□ -0.94
LINC01013-202ENST00000436112 SP7Q8TDD2 431 aaPredicted RBP9.17□□□□□ -0.94
LINC01013-202ENST00000436112 REM2Q8IYK8 340 aaPredicted RBP9.15□□□□□ -0.94
LINC01013-202ENST00000436112 ATXN8OSP0DMR3 200 aa9.12□□□□□ -0.95
LINC01013-202ENST00000436112 PIP4P2Q8N4L2 257 aa9.11□□□□□ -0.95
LINC01013-202ENST00000436112 FXR2P51116 673 aaKnown RBP eCLIP9.1□□□□□ -0.95
LINC01013-202ENST00000436112 OSCARQ8IYS5 282 aa9.1□□□□□ -0.95
LINC01013-202ENST00000436112 PITPNM1O00562 1244 aa9.05□□□□□ -0.96
LINC01013-202ENST00000436112 ZBTB22O15209 634 aa9.01□□□□□ -0.97
LINC01013-202ENST00000436112 SPDYE2BA6NHP3 402 aa8.99□□□□□ -0.97
LINC01013-202ENST00000436112 SPDYE6P0CI01 402 aa8.99□□□□□ -0.97
LINC01013-202ENST00000436112 SPDYE2Q495Y8 402 aa8.99□□□□□ -0.97
LINC01013-202ENST00000436112 HAX1O00165 279 aa8.91□□□□□ -0.98
LINC01013-202ENST00000436112 FBLN2P98095 1184 aa8.89□□□□□ -0.99
LINC01013-202ENST00000436112 SSUH2Q9Y2M2 353 aa8.88□□□□□ -0.99
LINC01013-202ENST00000436112 SPDYE1Q8NFV5 336 aaPredicted RBP8.84□□□□□ -0.99
LINC01013-202ENST00000436112 MKRN4PQ13434 485 aaPredicted RBP8.83□□□□□ -1
LINC01013-202ENST00000436112 EVX2Q03828 476 aa8.81□□□□□ -1
LINC01013-202ENST00000436112 C19orf67A6NJJ6 358 aa8.8□□□□□ -1
LINC01013-202ENST00000436112 PRKAR2AP13861 404 aaKnown RBP8.77□□□□□ -1.01
LINC01013-202ENST00000436112 ZNF692Q9BU19 519 aaPredicted RBP8.72□□□□□ -1.01
LINC01013-202ENST00000436112 CLEC11AQ9Y240 323 aa8.67□□□□□ -1.02
LINC01013-202ENST00000436112 GABBR2O75899 941 aa8.65□□□□□ -1.02
LINC01013-202ENST00000436112 CLCN6P51797 869 aa8.64□□□□□ -1.03
LINC01013-202ENST00000436112 PABPN1Q86U42 306 aaKnown RBP eCLIP8.59□□□□□ -1.03
LINC01013-202ENST00000436112 PRR29P0C7W0 189 aa8.58□□□□□ -1.04
LINC01013-202ENST00000436112 LHX8Q68G74 356 aa8.55□□□□□ -1.04
LINC01013-202ENST00000436112 CHADLQ6NUI6 762 aa8.55□□□□□ -1.04
LINC01013-202ENST00000436112 FARP1Q9Y4F1 1045 aaPredicted RBP8.52□□□□□ -1.05
LINC01013-202ENST00000436112 CD44P16070 742 aaKnown RBP8.49□□□□□ -1.05
LINC01013-202ENST00000436112 POTEIP0CG38 1075 aa8.48□□□□□ -1.05
LINC01013-202ENST00000436112 ZNF579Q8NAF0 562 aaKnown RBP8.46□□□□□ -1.06
LINC01013-202ENST00000436112 STAG3Q9UJ98 1225 aa8.41□□□□□ -1.06
LINC01013-202ENST00000436112 CSRNP3Q8WYN3 585 aa8.39□□□□□ -1.07
LINC01013-202ENST00000436112 CREBZFQ9NS37 354 aa8.38□□□□□ -1.07
LINC01013-202ENST00000436112 DCBLD2Q96PD2 775 aa8.31□□□□□ -1.08
LINC01013-202ENST00000436112 ZRANB1Q9UGI0 708 aa8.29□□□□□ -1.08
LINC01013-202ENST00000436112 MNX1P50219 401 aaPredicted RBP8.27□□□□□ -1.09
LINC01013-202ENST00000436112 SPDYE4A6NLX3 237 aa8.25□□□□□ -1.09
LINC01013-202ENST00000436112 GALR2O43603 387 aaPredicted RBP8.25□□□□□ -1.09
LINC01013-202ENST00000436112 PAK3O75914 559 aaPredicted RBP8.22□□□□□ -1.09
LINC01013-202ENST00000436112 NPM1P06748 294 aaKnown RBP eCLIP8.22□□□□□ -1.09
LINC01013-202ENST00000436112 PROM2Q8N271 834 aa8.22□□□□□ -1.09
LINC01013-202ENST00000436112 OTUD5Q96G74 571 aa8.21□□□□□ -1.1
LINC01013-202ENST00000436112 ASTLQ6HA08 431 aaPredicted RBP8.19□□□□□ -1.1
LINC01013-202ENST00000436112 POTEB2H3BUK9 544 aa8.17□□□□□ -1.1
LINC01013-202ENST00000436112 PHF12Q96QT6 1004 aa8.16□□□□□ -1.1
LINC01013-202ENST00000436112 PELP1Q8IZL8 1130 aaKnown RBP8.12□□□□□ -1.11
LINC01013-202ENST00000436112 C7P10643 843 aa8.11□□□□□ -1.11
LINC01013-202ENST00000436112 SLC39A7Q92504 469 aa8.11□□□□□ -1.11
LINC01013-202ENST00000436112 ATMINO43313 823 aaPredicted RBP8.1□□□□□ -1.11
LINC01013-202ENST00000436112 MS4A3Q96HJ5 214 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms