RNA–Protein interactions for RNA: ENST00000435629.5

LINC00993-203, long intergenic non-protein coding RNA 993, humanhuman

TSL 3

Gene LINC00993, Length 425 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-203ENST00000435629 AEBP2Q6ZN18 517 aaPredicted RBP12.35□□□□□ -0.43
LINC00993-203ENST00000435629 CHIC1Q5VXU3 224 aa11.71□□□□□ -0.53
LINC00993-203ENST00000435629 SENP3Q9H4L4 574 aaPredicted RBP10.48□□□□□ -0.73
LINC00993-203ENST00000435629 PHF23Q9BUL5 403 aaPredicted RBP10.34□□□□□ -0.75
LINC00993-203ENST00000435629 POTEDQ86YR6 584 aa9.86□□□□□ -0.83
LINC00993-203ENST00000435629 FOXD1Q16676 465 aa9.8□□□□□ -0.84
LINC00993-203ENST00000435629 MSH5O43196 834 aa9.39□□□□□ -0.91
LINC00993-203ENST00000435629 PLPPR3Q6T4P5 718 aa9.33□□□□□ -0.92
LINC00993-203ENST00000435629 PPP6R1Q9UPN7 881 aa9.18□□□□□ -0.94
LINC00993-203ENST00000435629 PIAS4Q8N2W9 510 aaPredicted RBP9.14□□□□□ -0.95
LINC00993-203ENST00000435629 ADRA2BP18089 450 aa9.13□□□□□ -0.95
LINC00993-203ENST00000435629 MAPK8IP2Q13387 824 aaPredicted RBP8.39□□□□□ -1.07
LINC00993-203ENST00000435629 DMRT2Q9Y5R5 561 aa8.33□□□□□ -1.08
LINC00993-203ENST00000435629 SCAF1Q9H7N4 1312 aaKnown RBP8.29□□□□□ -1.08
LINC00993-203ENST00000435629 CACNB1Q02641 598 aaPredicted RBP8.28□□□□□ -1.08
LINC00993-203ENST00000435629 PPP4R3CPQ6ZMV5 832 aa8.2□□□□□ -1.1
LINC00993-203ENST00000435629 HOXD11P31277 338 aaPredicted RBP8.04□□□□□ -1.12
LINC00993-203ENST00000435629 CNKSR2Q8WXI2 1034 aa8.03□□□□□ -1.12
LINC00993-203ENST00000435629 RNF216Q9NWF9 866 aaPredicted RBP7.96□□□□□ -1.14
LINC00993-203ENST00000435629 DCAF8L1A6NGE4 600 aa7.94□□□□□ -1.14
LINC00993-203ENST00000435629 RNF39Q9H2S5 420 aa7.9□□□□□ -1.14
LINC00993-203ENST00000435629 NCBP3Q53F19 620 aaKnown RBP7.83□□□□□ -1.16
LINC00993-203ENST00000435629 C1QBPQ07021 282 aaKnown RBP7.81□□□□□ -1.16
LINC00993-203ENST00000435629 NPM3O75607 178 aaKnown RBP7.79□□□□□ -1.16
LINC00993-203ENST00000435629 DNAJC5BQ9UF47 199 aa7.73□□□□□ -1.17
LINC00993-203ENST00000435629 POTEHQ6S545 545 aa7.66□□□□□ -1.18
LINC00993-203ENST00000435629 KCNA4P22459 653 aa7.65□□□□□ -1.18
LINC00993-203ENST00000435629 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.6□□□□□ -1.19
LINC00993-203ENST00000435629 U3KPZ7 1027 aaPredicted RBP7.51□□□□□ -1.21
LINC00993-203ENST00000435629 SLC4A2P04920 1241 aa7.45□□□□□ -1.22
LINC00993-203ENST00000435629 SPINK5Q9NQ38 1064 aaPredicted RBP7.39□□□□□ -1.23
LINC00993-203ENST00000435629 CAPN15O75808 1086 aa7.33□□□□□ -1.24
LINC00993-203ENST00000435629 DSG3P32926 999 aa7.32□□□□□ -1.24
LINC00993-203ENST00000435629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.22□□□□□ -1.25
LINC00993-203ENST00000435629 TRHP20396 242 aaPredicted RBP7.22□□□□□ -1.25
LINC00993-203ENST00000435629 HNRNPUL2Q1KMD3 747 aaKnown RBP7.22□□□□□ -1.25
LINC00993-203ENST00000435629 APLP2Q06481 763 aa7.21□□□□□ -1.26
LINC00993-203ENST00000435629 ZNF219Q9P2Y4 722 aaPredicted RBP7.21□□□□□ -1.26
LINC00993-203ENST00000435629 SAMD1Q6SPF0 538 aaPredicted RBP7.2□□□□□ -1.26
LINC00993-203ENST00000435629 SLC4A1APQ9BWU0 796 aaKnown RBP7.2□□□□□ -1.26
LINC00993-203ENST00000435629 ABCB7O75027 752 aa7.19□□□□□ -1.26
LINC00993-203ENST00000435629 MYCNP04198 464 aaPredicted RBP7.19□□□□□ -1.26
LINC00993-203ENST00000435629 FOXD4L1Q9NU39 408 aa7.12□□□□□ -1.27
LINC00993-203ENST00000435629 ZBTB22O15209 634 aa7.07□□□□□ -1.28
LINC00993-203ENST00000435629 ATF5Q9Y2D1 282 aaPredicted RBP7.06□□□□□ -1.28
LINC00993-203ENST00000435629 POLA2Q14181 598 aa7.03□□□□□ -1.28
LINC00993-203ENST00000435629 RBM42Q9BTD8 480 aaKnown RBP7.01□□□□□ -1.29
LINC00993-203ENST00000435629 CHRDL2Q6WN34 429 aa6.97□□□□□ -1.29
LINC00993-203ENST00000435629 SP7Q8TDD2 431 aaPredicted RBP6.97□□□□□ -1.29
LINC00993-203ENST00000435629 ATXN8OSP0DMR3 200 aa6.87□□□□□ -1.31
LINC00993-203ENST00000435629 ZBTB12Q9Y330 459 aaPredicted RBP6.87□□□□□ -1.31
LINC00993-203ENST00000435629 OSCARQ8IYS5 282 aa6.84□□□□□ -1.31
LINC00993-203ENST00000435629 AKT1S1Q96B36 256 aa6.8□□□□□ -1.32
LINC00993-203ENST00000435629 REM2Q8IYK8 340 aaPredicted RBP6.75□□□□□ -1.33
LINC00993-203ENST00000435629 MKRN4PQ13434 485 aaPredicted RBP6.74□□□□□ -1.33
LINC00993-203ENST00000435629 CSRNP3Q8WYN3 585 aa6.72□□□□□ -1.33
LINC00993-203ENST00000435629 PITPNM1O00562 1244 aa6.7□□□□□ -1.34
LINC00993-203ENST00000435629 FBLN2P98095 1184 aa6.7□□□□□ -1.34
LINC00993-203ENST00000435629 HAX1O00165 279 aa6.69□□□□□ -1.34
LINC00993-203ENST00000435629 SPDYE2BA6NHP3 402 aa6.68□□□□□ -1.34
LINC00993-203ENST00000435629 SPDYE6P0CI01 402 aa6.68□□□□□ -1.34
LINC00993-203ENST00000435629 SPDYE2Q495Y8 402 aa6.68□□□□□ -1.34
LINC00993-203ENST00000435629 PIP4P2Q8N4L2 257 aa6.67□□□□□ -1.34
LINC00993-203ENST00000435629 FXR2P51116 673 aaKnown RBP eCLIP6.63□□□□□ -1.35
LINC00993-203ENST00000435629 EHMT2Q96KQ7 1210 aa6.63□□□□□ -1.35
LINC00993-203ENST00000435629 SSUH2Q9Y2M2 353 aa6.63□□□□□ -1.35
LINC00993-203ENST00000435629 ZNF692Q9BU19 519 aaPredicted RBP6.58□□□□□ -1.36
LINC00993-203ENST00000435629 SPDYE1Q8NFV5 336 aaPredicted RBP6.54□□□□□ -1.36
LINC00993-203ENST00000435629 CLEC11AQ9Y240 323 aa6.54□□□□□ -1.36
LINC00993-203ENST00000435629 LHX8Q68G74 356 aa6.52□□□□□ -1.37
LINC00993-203ENST00000435629 PABPN1Q86U42 306 aaKnown RBP eCLIP6.51□□□□□ -1.37
LINC00993-203ENST00000435629 PRKAR2AP13861 404 aaKnown RBP6.5□□□□□ -1.37
LINC00993-203ENST00000435629 EVX2Q03828 476 aa6.48□□□□□ -1.37
LINC00993-203ENST00000435629 PLSCR2Q9NRY7 297 aa6.48□□□□□ -1.37
LINC00993-203ENST00000435629 CHADLQ6NUI6 762 aa6.45□□□□□ -1.38
LINC00993-203ENST00000435629 C19orf67A6NJJ6 358 aa6.42□□□□□ -1.38
LINC00993-203ENST00000435629 PRR29P0C7W0 189 aa6.42□□□□□ -1.38
LINC00993-203ENST00000435629 SPDYE4A6NLX3 237 aa6.37□□□□□ -1.39
LINC00993-203ENST00000435629 GABBR2O75899 941 aa6.37□□□□□ -1.39
LINC00993-203ENST00000435629 FARP1Q9Y4F1 1045 aaPredicted RBP6.33□□□□□ -1.4
LINC00993-203ENST00000435629 CREBZFQ9NS37 354 aa6.31□□□□□ -1.4
LINC00993-203ENST00000435629 CD44P16070 742 aaKnown RBP6.29□□□□□ -1.4
LINC00993-203ENST00000435629 STAG3Q9UJ98 1225 aa6.29□□□□□ -1.4
LINC00993-203ENST00000435629 CLCN6P51797 869 aa6.28□□□□□ -1.4
LINC00993-203ENST00000435629 PROM2Q8N271 834 aa6.27□□□□□ -1.41
LINC00993-203ENST00000435629 MNX1P50219 401 aaPredicted RBP6.23□□□□□ -1.41
LINC00993-203ENST00000435629 POTEIP0CG38 1075 aa6.21□□□□□ -1.42
LINC00993-203ENST00000435629 ZNF579Q8NAF0 562 aaKnown RBP6.21□□□□□ -1.42
LINC00993-203ENST00000435629 ZRANB1Q9UGI0 708 aa6.2□□□□□ -1.42
LINC00993-203ENST00000435629 PCDH10Q9P2E7 1040 aa6.19□□□□□ -1.42
LINC00993-203ENST00000435629 POTEMA6NI47 508 aa6.16□□□□□ -1.42
LINC00993-203ENST00000435629 DCBLD2Q96PD2 775 aa6.16□□□□□ -1.42
LINC00993-203ENST00000435629 GALR2O43603 387 aaPredicted RBP6.15□□□□□ -1.42
LINC00993-203ENST00000435629 PHF12Q96QT6 1004 aa6.14□□□□□ -1.43
LINC00993-203ENST00000435629 NPM1P06748 294 aaKnown RBP eCLIP6.13□□□□□ -1.43
LINC00993-203ENST00000435629 POTEGQ6S5H5 508 aa6.12□□□□□ -1.43
LINC00993-203ENST00000435629 PAK3O75914 559 aaPredicted RBP6.11□□□□□ -1.43
LINC00993-203ENST00000435629 OTUD5Q96G74 571 aa6.08□□□□□ -1.44
LINC00993-203ENST00000435629 FKBP8Q14318 412 aa6.07□□□□□ -1.44
LINC00993-203ENST00000435629 MS4A3Q96HJ5 214 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms