RNA–Protein interactions for RNA: ENST00000435451.1

ABCA13-203, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 3

Gene ABCA13, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-203ENST00000435451 AEBP2Q6ZN18 517 aaPredicted RBP26.56■■□□□ 1.84
ABCA13-203ENST00000435451 CHIC1Q5VXU3 224 aa25.62■■□□□ 1.69
ABCA13-203ENST00000435451 SENP3Q9H4L4 574 aaPredicted RBP22.57■■□□□ 1.2
ABCA13-203ENST00000435451 PHF23Q9BUL5 403 aaPredicted RBP22.51■■□□□ 1.19
ABCA13-203ENST00000435451 FOXD1Q16676 465 aa21■□□□□ 0.95
ABCA13-203ENST00000435451 PLPPR3Q6T4P5 718 aa20.65■□□□□ 0.9
ABCA13-203ENST00000435451 PPP6R1Q9UPN7 881 aa19.97■□□□□ 0.79
ABCA13-203ENST00000435451 ADRA2BP18089 450 aa19.9■□□□□ 0.78
ABCA13-203ENST00000435451 PIAS4Q8N2W9 510 aaPredicted RBP19.68■□□□□ 0.74
ABCA13-203ENST00000435451 MSH5O43196 834 aa19.48■□□□□ 0.71
ABCA13-203ENST00000435451 POTEDQ86YR6 584 aa18.32■□□□□ 0.52
ABCA13-203ENST00000435451 SCAF1Q9H7N4 1312 aaKnown RBP18.22■□□□□ 0.51
ABCA13-203ENST00000435451 MAPK8IP2Q13387 824 aaPredicted RBP18.16■□□□□ 0.5
ABCA13-203ENST00000435451 PPP4R3CPQ6ZMV5 832 aa18.16■□□□□ 0.5
ABCA13-203ENST00000435451 DMRT2Q9Y5R5 561 aa17.98■□□□□ 0.47
ABCA13-203ENST00000435451 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
ABCA13-203ENST00000435451 NCBP3Q53F19 620 aaKnown RBP17.56■□□□□ 0.4
ABCA13-203ENST00000435451 HOXD11P31277 338 aaPredicted RBP17.51■□□□□ 0.39
ABCA13-203ENST00000435451 RNF216Q9NWF9 866 aaPredicted RBP17.47■□□□□ 0.39
ABCA13-203ENST00000435451 KCNA4P22459 653 aa17.35■□□□□ 0.37
ABCA13-203ENST00000435451 NPM3O75607 178 aaKnown RBP17.33■□□□□ 0.36
ABCA13-203ENST00000435451 DCAF8L1A6NGE4 600 aa17.13■□□□□ 0.33
ABCA13-203ENST00000435451 DNAJC5BQ9UF47 199 aa16.95■□□□□ 0.3
ABCA13-203ENST00000435451 RNF39Q9H2S5 420 aa16.67■□□□□ 0.26
ABCA13-203ENST00000435451 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.61■□□□□ 0.25
ABCA13-203ENST00000435451 SLC4A2P04920 1241 aa16.46■□□□□ 0.23
ABCA13-203ENST00000435451 C1QBPQ07021 282 aaKnown RBP16.46■□□□□ 0.23
ABCA13-203ENST00000435451 CACNB1Q02641 598 aaPredicted RBP16.44■□□□□ 0.22
ABCA13-203ENST00000435451 SLC4A1APQ9BWU0 796 aaKnown RBP16.44■□□□□ 0.22
ABCA13-203ENST00000435451 U3KPZ7 1027 aaPredicted RBP16.34■□□□□ 0.21
ABCA13-203ENST00000435451 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
ABCA13-203ENST00000435451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.01■□□□□ 0.15
ABCA13-203ENST00000435451 MYCNP04198 464 aaPredicted RBP16.01■□□□□ 0.15
ABCA13-203ENST00000435451 HNRNPUL2Q1KMD3 747 aaKnown RBP16.01■□□□□ 0.15
ABCA13-203ENST00000435451 SPINK5Q9NQ38 1064 aaPredicted RBP15.97■□□□□ 0.15
ABCA13-203ENST00000435451 ZBTB22O15209 634 aa15.96■□□□□ 0.15
ABCA13-203ENST00000435451 SAMD1Q6SPF0 538 aaPredicted RBP15.94■□□□□ 0.14
ABCA13-203ENST00000435451 APLP2Q06481 763 aa15.91■□□□□ 0.14
ABCA13-203ENST00000435451 CAPN15O75808 1086 aa15.89■□□□□ 0.13
ABCA13-203ENST00000435451 DSG3P32926 999 aa15.76■□□□□ 0.11
ABCA13-203ENST00000435451 ZNF219Q9P2Y4 722 aaPredicted RBP15.75■□□□□ 0.11
ABCA13-203ENST00000435451 TRHP20396 242 aaPredicted RBP15.74■□□□□ 0.11
ABCA13-203ENST00000435451 CSRNP3Q8WYN3 585 aa15.63■□□□□ 0.09
ABCA13-203ENST00000435451 ATF5Q9Y2D1 282 aaPredicted RBP15.61■□□□□ 0.09
ABCA13-203ENST00000435451 ATXN8OSP0DMR3 200 aa15.56■□□□□ 0.08
ABCA13-203ENST00000435451 ABCB7O75027 752 aa15.55■□□□□ 0.08
ABCA13-203ENST00000435451 EHMT2Q96KQ7 1210 aa15.55■□□□□ 0.08
ABCA13-203ENST00000435451 POLA2Q14181 598 aa15.44■□□□□ 0.06
ABCA13-203ENST00000435451 ZBTB12Q9Y330 459 aaPredicted RBP15.15■□□□□ 0.02
ABCA13-203ENST00000435451 RBM42Q9BTD8 480 aaKnown RBP15□□□□□ -0.01
ABCA13-203ENST00000435451 FBLN2P98095 1184 aa14.94□□□□□ -0.02
ABCA13-203ENST00000435451 MKRN4PQ13434 485 aaPredicted RBP14.93□□□□□ -0.02
ABCA13-203ENST00000435451 OSCARQ8IYS5 282 aa14.9□□□□□ -0.02
ABCA13-203ENST00000435451 AKT1S1Q96B36 256 aa14.76□□□□□ -0.05
ABCA13-203ENST00000435451 SPDYE2BA6NHP3 402 aa14.74□□□□□ -0.05
ABCA13-203ENST00000435451 SPDYE6P0CI01 402 aa14.74□□□□□ -0.05
ABCA13-203ENST00000435451 SPDYE2Q495Y8 402 aa14.74□□□□□ -0.05
ABCA13-203ENST00000435451 REM2Q8IYK8 340 aaPredicted RBP14.61□□□□□ -0.07
ABCA13-203ENST00000435451 ZNF692Q9BU19 519 aaPredicted RBP14.61□□□□□ -0.07
ABCA13-203ENST00000435451 SSUH2Q9Y2M2 353 aa14.6□□□□□ -0.07
ABCA13-203ENST00000435451 CHRDL2Q6WN34 429 aa14.5□□□□□ -0.09
ABCA13-203ENST00000435451 PITPNM1O00562 1244 aa14.43□□□□□ -0.1
ABCA13-203ENST00000435451 POTEHQ6S545 545 aa14.43□□□□□ -0.1
ABCA13-203ENST00000435451 PABPN1Q86U42 306 aaKnown RBP eCLIP14.41□□□□□ -0.1
ABCA13-203ENST00000435451 SPDYE4A6NLX3 237 aa14.4□□□□□ -0.1
ABCA13-203ENST00000435451 SPDYE1Q8NFV5 336 aaPredicted RBP14.36□□□□□ -0.11
ABCA13-203ENST00000435451 CLEC11AQ9Y240 323 aa14.29□□□□□ -0.12
ABCA13-203ENST00000435451 FXR2P51116 673 aaKnown RBP eCLIP14.27□□□□□ -0.13
ABCA13-203ENST00000435451 PIP4P2Q8N4L2 257 aa14.26□□□□□ -0.13
ABCA13-203ENST00000435451 PROM2Q8N271 834 aa14.18□□□□□ -0.14
ABCA13-203ENST00000435451 PRR29P0C7W0 189 aa14.14□□□□□ -0.15
ABCA13-203ENST00000435451 STAG3Q9UJ98 1225 aa14.12□□□□□ -0.15
ABCA13-203ENST00000435451 FKBP8Q14318 412 aa14.09□□□□□ -0.15
ABCA13-203ENST00000435451 PRKAR2AP13861 404 aaKnown RBP14.07□□□□□ -0.16
ABCA13-203ENST00000435451 CHADLQ6NUI6 762 aa13.99□□□□□ -0.17
ABCA13-203ENST00000435451 CREBZFQ9NS37 354 aa13.9□□□□□ -0.18
ABCA13-203ENST00000435451 HAX1O00165 279 aa13.86□□□□□ -0.19
ABCA13-203ENST00000435451 FARP1Q9Y4F1 1045 aaPredicted RBP13.85□□□□□ -0.19
ABCA13-203ENST00000435451 C19orf67A6NJJ6 358 aa13.79□□□□□ -0.2
ABCA13-203ENST00000435451 EVX2Q03828 476 aa13.77□□□□□ -0.21
ABCA13-203ENST00000435451 MNX1P50219 401 aaPredicted RBP13.75□□□□□ -0.21
ABCA13-203ENST00000435451 SP7Q8TDD2 431 aaPredicted RBP13.72□□□□□ -0.21
ABCA13-203ENST00000435451 FBXO3Q9UK99 471 aa13.7□□□□□ -0.22
ABCA13-203ENST00000435451 MIER1Q8N108 512 aa13.69□□□□□ -0.22
ABCA13-203ENST00000435451 NPM1P06748 294 aaKnown RBP eCLIP13.64□□□□□ -0.23
ABCA13-203ENST00000435451 CD44P16070 742 aaKnown RBP13.64□□□□□ -0.23
ABCA13-203ENST00000435451 PLEKHG5O94827 1062 aa13.62□□□□□ -0.23
ABCA13-203ENST00000435451 PLCD3Q8N3E9 789 aa13.61□□□□□ -0.23
ABCA13-203ENST00000435451 VASPP50552 380 aaPredicted RBP13.51□□□□□ -0.25
ABCA13-203ENST00000435451 ZRANB1Q9UGI0 708 aa13.51□□□□□ -0.25
ABCA13-203ENST00000435451 ZBTB47Q9UFB7 747 aaPredicted RBP13.5□□□□□ -0.25
ABCA13-203ENST00000435451 GABBR2O75899 941 aa13.47□□□□□ -0.25
ABCA13-203ENST00000435451 PAK3O75914 559 aaPredicted RBP13.47□□□□□ -0.25
ABCA13-203ENST00000435451 ZNF579Q8NAF0 562 aaKnown RBP13.47□□□□□ -0.25
ABCA13-203ENST00000435451 CLCN6P51797 869 aa13.44□□□□□ -0.26
ABCA13-203ENST00000435451 NUBP1P53384 320 aa13.41□□□□□ -0.26
ABCA13-203ENST00000435451 RASEFQ8IZ41 740 aa13.4□□□□□ -0.26
ABCA13-203ENST00000435451 TSPYL2Q9H2G4 693 aaPredicted RBP13.39□□□□□ -0.27
ABCA13-203ENST00000435451 CCDC61Q9Y6R9 512 aa13.36□□□□□ -0.27
ABCA13-203ENST00000435451 IFNLR1Q8IU57 520 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms