RNA–Protein interactions for RNA: ENST00000434288.1

RAD50-204, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 2

Gene RAD50, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-204ENST00000434288 AEBP2Q6ZN18 517 aaPredicted RBP25.89■■□□□ 1.74
RAD50-204ENST00000434288 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
RAD50-204ENST00000434288 PHF23Q9BUL5 403 aaPredicted RBP22.13■■□□□ 1.13
RAD50-204ENST00000434288 SENP3Q9H4L4 574 aaPredicted RBP22.12■■□□□ 1.13
RAD50-204ENST00000434288 FOXD1Q16676 465 aa20.59■□□□□ 0.89
RAD50-204ENST00000434288 PLPPR3Q6T4P5 718 aa20.58■□□□□ 0.89
RAD50-204ENST00000434288 ADRA2BP18089 450 aa19.48■□□□□ 0.71
RAD50-204ENST00000434288 PPP6R1Q9UPN7 881 aa19.46■□□□□ 0.71
RAD50-204ENST00000434288 PIAS4Q8N2W9 510 aaPredicted RBP19.29■□□□□ 0.68
RAD50-204ENST00000434288 MSH5O43196 834 aa19.28■□□□□ 0.68
RAD50-204ENST00000434288 POTEDQ86YR6 584 aa18.72■□□□□ 0.59
RAD50-204ENST00000434288 PPP4R3CPQ6ZMV5 832 aa18.12■□□□□ 0.49
RAD50-204ENST00000434288 SCAF1Q9H7N4 1312 aaKnown RBP17.97■□□□□ 0.47
RAD50-204ENST00000434288 KCNA4P22459 653 aa17.8■□□□□ 0.44
RAD50-204ENST00000434288 NCBP3Q53F19 620 aaKnown RBP17.76■□□□□ 0.43
RAD50-204ENST00000434288 MAPK8IP2Q13387 824 aaPredicted RBP17.67■□□□□ 0.42
RAD50-204ENST00000434288 CNKSR2Q8WXI2 1034 aa17.61■□□□□ 0.41
RAD50-204ENST00000434288 DMRT2Q9Y5R5 561 aa17.53■□□□□ 0.4
RAD50-204ENST00000434288 NPM3O75607 178 aaKnown RBP17.4■□□□□ 0.38
RAD50-204ENST00000434288 RNF216Q9NWF9 866 aaPredicted RBP17.22■□□□□ 0.35
RAD50-204ENST00000434288 HOXD11P31277 338 aaPredicted RBP17.1■□□□□ 0.33
RAD50-204ENST00000434288 SLC4A1APQ9BWU0 796 aaKnown RBP17.04■□□□□ 0.32
RAD50-204ENST00000434288 DCAF8L1A6NGE4 600 aa16.9■□□□□ 0.3
RAD50-204ENST00000434288 DNAJC5BQ9UF47 199 aa16.9■□□□□ 0.3
RAD50-204ENST00000434288 EHMT2Q96KQ7 1210 aa16.67■□□□□ 0.26
RAD50-204ENST00000434288 CACNB1Q02641 598 aaPredicted RBP16.55■□□□□ 0.24
RAD50-204ENST00000434288 RNF39Q9H2S5 420 aa16.43■□□□□ 0.22
RAD50-204ENST00000434288 FOXD4L1Q9NU39 408 aa16.41■□□□□ 0.22
RAD50-204ENST00000434288 CSRNP3Q8WYN3 585 aa16.4■□□□□ 0.22
RAD50-204ENST00000434288 SLC4A2P04920 1241 aa16.36■□□□□ 0.21
RAD50-204ENST00000434288 ZBTB22O15209 634 aa16.34■□□□□ 0.21
RAD50-204ENST00000434288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.34■□□□□ 0.21
RAD50-204ENST00000434288 C1QBPQ07021 282 aaKnown RBP16.21■□□□□ 0.19
RAD50-204ENST00000434288 MYCNP04198 464 aaPredicted RBP16.13■□□□□ 0.17
RAD50-204ENST00000434288 U3KPZ7 1027 aaPredicted RBP16.02■□□□□ 0.16
RAD50-204ENST00000434288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.98■□□□□ 0.15
RAD50-204ENST00000434288 HNRNPUL2Q1KMD3 747 aaKnown RBP15.98■□□□□ 0.15
RAD50-204ENST00000434288 SAMD1Q6SPF0 538 aaPredicted RBP15.9■□□□□ 0.14
RAD50-204ENST00000434288 ATXN8OSP0DMR3 200 aa15.86■□□□□ 0.13
RAD50-204ENST00000434288 APLP2Q06481 763 aa15.82■□□□□ 0.12
RAD50-204ENST00000434288 ATF5Q9Y2D1 282 aaPredicted RBP15.59■□□□□ 0.09
RAD50-204ENST00000434288 CAPN15O75808 1086 aa15.57■□□□□ 0.08
RAD50-204ENST00000434288 SPINK5Q9NQ38 1064 aaPredicted RBP15.55■□□□□ 0.08
RAD50-204ENST00000434288 ZNF219Q9P2Y4 722 aaPredicted RBP15.51■□□□□ 0.07
RAD50-204ENST00000434288 TRHP20396 242 aaPredicted RBP15.46■□□□□ 0.07
RAD50-204ENST00000434288 DSG3P32926 999 aa15.4■□□□□ 0.06
RAD50-204ENST00000434288 POLA2Q14181 598 aa15.24■□□□□ 0.03
RAD50-204ENST00000434288 ABCB7O75027 752 aa15.2■□□□□ 0.02
RAD50-204ENST00000434288 ZBTB12Q9Y330 459 aaPredicted RBP15.07■□□□□ 0
RAD50-204ENST00000434288 FBLN2P98095 1184 aa15.05■□□□□ -0
RAD50-204ENST00000434288 MKRN4PQ13434 485 aaPredicted RBP14.92□□□□□ -0.02
RAD50-204ENST00000434288 FKBP8Q14318 412 aa14.86□□□□□ -0.03
RAD50-204ENST00000434288 SPDYE4A6NLX3 237 aa14.73□□□□□ -0.05
RAD50-204ENST00000434288 RBM42Q9BTD8 480 aaKnown RBP14.73□□□□□ -0.05
RAD50-204ENST00000434288 POTEHQ6S545 545 aa14.69□□□□□ -0.06
RAD50-204ENST00000434288 OSCARQ8IYS5 282 aa14.68□□□□□ -0.06
RAD50-204ENST00000434288 SPDYE2BA6NHP3 402 aa14.64□□□□□ -0.07
RAD50-204ENST00000434288 SPDYE6P0CI01 402 aa14.64□□□□□ -0.07
RAD50-204ENST00000434288 SPDYE2Q495Y8 402 aa14.64□□□□□ -0.07
RAD50-204ENST00000434288 ZNF692Q9BU19 519 aaPredicted RBP14.6□□□□□ -0.07
RAD50-204ENST00000434288 SSUH2Q9Y2M2 353 aa14.49□□□□□ -0.09
RAD50-204ENST00000434288 PROM2Q8N271 834 aa14.46□□□□□ -0.09
RAD50-204ENST00000434288 AKT1S1Q96B36 256 aa14.39□□□□□ -0.11
RAD50-204ENST00000434288 CHRDL2Q6WN34 429 aa14.38□□□□□ -0.11
RAD50-204ENST00000434288 PABPN1Q86U42 306 aaKnown RBP eCLIP14.38□□□□□ -0.11
RAD50-204ENST00000434288 FBXO3Q9UK99 471 aa14.38□□□□□ -0.11
RAD50-204ENST00000434288 REM2Q8IYK8 340 aaPredicted RBP14.26□□□□□ -0.13
RAD50-204ENST00000434288 STAG3Q9UJ98 1225 aa14.26□□□□□ -0.13
RAD50-204ENST00000434288 SPDYE1Q8NFV5 336 aaPredicted RBP14.18□□□□□ -0.14
RAD50-204ENST00000434288 PITPNM1O00562 1244 aa14.1□□□□□ -0.15
RAD50-204ENST00000434288 VASPP50552 380 aaPredicted RBP14.1□□□□□ -0.15
RAD50-204ENST00000434288 CLEC11AQ9Y240 323 aa14.1□□□□□ -0.15
RAD50-204ENST00000434288 PIP4P2Q8N4L2 257 aa14.04□□□□□ -0.16
RAD50-204ENST00000434288 PRR29P0C7W0 189 aa14.01□□□□□ -0.17
RAD50-204ENST00000434288 MIER1Q8N108 512 aa13.99□□□□□ -0.17
RAD50-204ENST00000434288 PLCD3Q8N3E9 789 aa13.99□□□□□ -0.17
RAD50-204ENST00000434288 PLEKHG5O94827 1062 aa13.98□□□□□ -0.17
RAD50-204ENST00000434288 FXR2P51116 673 aaKnown RBP eCLIP13.95□□□□□ -0.18
RAD50-204ENST00000434288 IFNLR1Q8IU57 520 aaPredicted RBP13.89□□□□□ -0.19
RAD50-204ENST00000434288 KLHL34Q8N239 644 aa13.88□□□□□ -0.19
RAD50-204ENST00000434288 ZBTB47Q9UFB7 747 aaPredicted RBP13.87□□□□□ -0.19
RAD50-204ENST00000434288 AMER1Q5JTC6 1135 aaPredicted RBP13.83□□□□□ -0.2
RAD50-204ENST00000434288 HAX1O00165 279 aa13.82□□□□□ -0.2
RAD50-204ENST00000434288 SP7Q8TDD2 431 aaPredicted RBP13.8□□□□□ -0.2
RAD50-204ENST00000434288 CREBZFQ9NS37 354 aa13.8□□□□□ -0.2
RAD50-204ENST00000434288 PRKAR2AP13861 404 aaKnown RBP13.76□□□□□ -0.21
RAD50-204ENST00000434288 SPOCK2Q92563 424 aa13.76□□□□□ -0.21
RAD50-204ENST00000434288 CHADLQ6NUI6 762 aa13.69□□□□□ -0.22
RAD50-204ENST00000434288 RTN4Q9NQC3 1192 aaKnown RBP13.69□□□□□ -0.22
RAD50-204ENST00000434288 NPM1P06748 294 aaKnown RBP eCLIP13.67□□□□□ -0.22
RAD50-204ENST00000434288 MNX1P50219 401 aaPredicted RBP13.64□□□□□ -0.23
RAD50-204ENST00000434288 FARP1Q9Y4F1 1045 aaPredicted RBP13.61□□□□□ -0.23
RAD50-204ENST00000434288 EVX2Q03828 476 aa13.59□□□□□ -0.23
RAD50-204ENST00000434288 NUBP1P53384 320 aa13.56□□□□□ -0.24
RAD50-204ENST00000434288 GSE1Q14687 1217 aa13.53□□□□□ -0.24
RAD50-204ENST00000434288 CIZ1Q9ULV3 898 aaPredicted RBP13.53□□□□□ -0.24
RAD50-204ENST00000434288 C19orf67A6NJJ6 358 aa13.51□□□□□ -0.25
RAD50-204ENST00000434288 DCAF8Q5TAQ9 597 aa13.5□□□□□ -0.25
RAD50-204ENST00000434288 FAM212AQ96EL1 285 aa13.5□□□□□ -0.25
RAD50-204ENST00000434288 PKD2Q13563 968 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms