RNA–Protein interactions for RNA: ENST00000432260.2

CUL3-205, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-205ENST00000432260 AEBP2Q6ZN18 517 aaPredicted RBP23.63■■□□□ 1.37
CUL3-205ENST00000432260 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
CUL3-205ENST00000432260 SENP3Q9H4L4 574 aaPredicted RBP20.01■□□□□ 0.79
CUL3-205ENST00000432260 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
CUL3-205ENST00000432260 FOXD1Q16676 465 aa18.71■□□□□ 0.59
CUL3-205ENST00000432260 PLPPR3Q6T4P5 718 aa18.1■□□□□ 0.49
CUL3-205ENST00000432260 PPP6R1Q9UPN7 881 aa17.63■□□□□ 0.41
CUL3-205ENST00000432260 ADRA2BP18089 450 aa17.6■□□□□ 0.41
CUL3-205ENST00000432260 PIAS4Q8N2W9 510 aaPredicted RBP17.5■□□□□ 0.39
CUL3-205ENST00000432260 MSH5O43196 834 aa17.34■□□□□ 0.37
CUL3-205ENST00000432260 POTEDQ86YR6 584 aa16.78■□□□□ 0.28
CUL3-205ENST00000432260 MAPK8IP2Q13387 824 aaPredicted RBP16.1■□□□□ 0.17
CUL3-205ENST00000432260 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
CUL3-205ENST00000432260 PPP4R3CPQ6ZMV5 832 aa15.93■□□□□ 0.14
CUL3-205ENST00000432260 DMRT2Q9Y5R5 561 aa15.92■□□□□ 0.14
CUL3-205ENST00000432260 CNKSR2Q8WXI2 1034 aa15.55■□□□□ 0.08
CUL3-205ENST00000432260 HOXD11P31277 338 aaPredicted RBP15.4■□□□□ 0.06
CUL3-205ENST00000432260 NCBP3Q53F19 620 aaKnown RBP15.35■□□□□ 0.05
CUL3-205ENST00000432260 RNF216Q9NWF9 866 aaPredicted RBP15.34■□□□□ 0.05
CUL3-205ENST00000432260 DCAF8L1A6NGE4 600 aa15.31■□□□□ 0.04
CUL3-205ENST00000432260 NPM3O75607 178 aaKnown RBP15.14■□□□□ 0.01
CUL3-205ENST00000432260 KCNA4P22459 653 aa15.06■□□□□ 0
CUL3-205ENST00000432260 RNF39Q9H2S5 420 aa14.88□□□□□ -0.03
CUL3-205ENST00000432260 CACNB1Q02641 598 aaPredicted RBP14.8□□□□□ -0.04
CUL3-205ENST00000432260 DNAJC5BQ9UF47 199 aa14.77□□□□□ -0.05
CUL3-205ENST00000432260 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.72□□□□□ -0.058e-7■■□□□ 12.5
CUL3-205ENST00000432260 C1QBPQ07021 282 aaKnown RBP14.61□□□□□ -0.07
CUL3-205ENST00000432260 U3KPZ7 1027 aaPredicted RBP14.42□□□□□ -0.1
CUL3-205ENST00000432260 SLC4A2P04920 1241 aa14.41□□□□□ -0.1
CUL3-205ENST00000432260 SLC4A1APQ9BWU0 796 aaKnown RBP14.27□□□□□ -0.13
CUL3-205ENST00000432260 SPINK5Q9NQ38 1064 aaPredicted RBP14.17□□□□□ -0.14
CUL3-205ENST00000432260 CAPN15O75808 1086 aa14.14□□□□□ -0.15
CUL3-205ENST00000432260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.03□□□□□ -0.16
CUL3-205ENST00000432260 HNRNPUL2Q1KMD3 747 aaKnown RBP14.03□□□□□ -0.16
CUL3-205ENST00000432260 APLP2Q06481 763 aa14□□□□□ -0.17
CUL3-205ENST00000432260 MYCNP04198 464 aaPredicted RBP13.99□□□□□ -0.17
CUL3-205ENST00000432260 DSG3P32926 999 aa13.99□□□□□ -0.17
CUL3-205ENST00000432260 SAMD1Q6SPF0 538 aaPredicted RBP13.98□□□□□ -0.17
CUL3-205ENST00000432260 TRHP20396 242 aaPredicted RBP13.97□□□□□ -0.17
CUL3-205ENST00000432260 FOXD4L1Q9NU39 408 aa13.97□□□□□ -0.17
CUL3-205ENST00000432260 ZNF219Q9P2Y4 722 aaPredicted RBP13.89□□□□□ -0.19
CUL3-205ENST00000432260 ZBTB22O15209 634 aa13.86□□□□□ -0.19
CUL3-205ENST00000432260 ABCB7O75027 752 aa13.85□□□□□ -0.19
CUL3-205ENST00000432260 ATF5Q9Y2D1 282 aaPredicted RBP13.69□□□□□ -0.22
CUL3-205ENST00000432260 POLA2Q14181 598 aa13.62□□□□□ -0.23
CUL3-205ENST00000432260 ATXN8OSP0DMR3 200 aa13.48□□□□□ -0.25
CUL3-205ENST00000432260 CSRNP3Q8WYN3 585 aa13.4□□□□□ -0.26
CUL3-205ENST00000432260 EHMT2Q96KQ7 1210 aa13.39□□□□□ -0.27
CUL3-205ENST00000432260 ZBTB12Q9Y330 459 aaPredicted RBP13.31□□□□□ -0.28
CUL3-205ENST00000432260 RBM42Q9BTD8 480 aaKnown RBP13.3□□□□□ -0.28
CUL3-205ENST00000432260 OSCARQ8IYS5 282 aa13.18□□□□□ -0.3
CUL3-205ENST00000432260 POTEHQ6S545 545 aa13.14□□□□□ -0.31
CUL3-205ENST00000432260 FBLN2P98095 1184 aa13.12□□□□□ -0.31
CUL3-205ENST00000432260 MKRN4PQ13434 485 aaPredicted RBP13.05□□□□□ -0.32
CUL3-205ENST00000432260 AKT1S1Q96B36 256 aa13.05□□□□□ -0.32
CUL3-205ENST00000432260 CHRDL2Q6WN34 429 aa12.97□□□□□ -0.33
CUL3-205ENST00000432260 REM2Q8IYK8 340 aaPredicted RBP12.95□□□□□ -0.34
CUL3-205ENST00000432260 SPDYE2BA6NHP3 402 aa12.94□□□□□ -0.34
CUL3-205ENST00000432260 SPDYE6P0CI01 402 aa12.94□□□□□ -0.34
CUL3-205ENST00000432260 SPDYE2Q495Y8 402 aa12.94□□□□□ -0.34
CUL3-205ENST00000432260 ZNF692Q9BU19 519 aaPredicted RBP12.84□□□□□ -0.35
CUL3-205ENST00000432260 PITPNM1O00562 1244 aa12.82□□□□□ -0.36
CUL3-205ENST00000432260 SSUH2Q9Y2M2 353 aa12.78□□□□□ -0.36
CUL3-205ENST00000432260 PIP4P2Q8N4L2 257 aa12.72□□□□□ -0.37
CUL3-205ENST00000432260 CLEC11AQ9Y240 323 aa12.68□□□□□ -0.38
CUL3-205ENST00000432260 PABPN1Q86U42 306 aaKnown RBP eCLIP12.67□□□□□ -0.38
CUL3-205ENST00000432260 SPDYE1Q8NFV5 336 aaPredicted RBP12.67□□□□□ -0.38
CUL3-205ENST00000432260 FXR2P51116 673 aaKnown RBP eCLIP12.65□□□□□ -0.38
CUL3-205ENST00000432260 SPDYE4A6NLX3 237 aa12.55□□□□□ -0.4
CUL3-205ENST00000432260 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
CUL3-205ENST00000432260 PRR29P0C7W0 189 aa12.48□□□□□ -0.41
CUL3-205ENST00000432260 CHADLQ6NUI6 762 aa12.43□□□□□ -0.42
CUL3-205ENST00000432260 HAX1O00165 279 aa12.42□□□□□ -0.42
CUL3-205ENST00000432260 SP7Q8TDD2 431 aaPredicted RBP12.38□□□□□ -0.43
CUL3-205ENST00000432260 EVX2Q03828 476 aa12.36□□□□□ -0.43
CUL3-205ENST00000432260 STAG3Q9UJ98 1225 aa12.33□□□□□ -0.44
CUL3-205ENST00000432260 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
CUL3-205ENST00000432260 PROM2Q8N271 834 aa12.23□□□□□ -0.45
CUL3-205ENST00000432260 FARP1Q9Y4F1 1045 aaPredicted RBP12.23□□□□□ -0.45
CUL3-205ENST00000432260 CREBZFQ9NS37 354 aa12.22□□□□□ -0.45
CUL3-205ENST00000432260 FKBP8Q14318 412 aa12.17□□□□□ -0.46
CUL3-205ENST00000432260 CD44P16070 742 aaKnown RBP12.11□□□□□ -0.47
CUL3-205ENST00000432260 MNX1P50219 401 aaPredicted RBP12.02□□□□□ -0.49
CUL3-205ENST00000432260 GABBR2O75899 941 aa12.01□□□□□ -0.49
CUL3-205ENST00000432260 NPM1P06748 294 aaKnown RBP eCLIP11.99□□□□□ -0.49
CUL3-205ENST00000432260 ZRANB1Q9UGI0 708 aa11.98□□□□□ -0.49
CUL3-205ENST00000432260 MIER1Q8N108 512 aa11.96□□□□□ -0.49
CUL3-205ENST00000432260 PAK3O75914 559 aaPredicted RBP11.9□□□□□ -0.5
CUL3-205ENST00000432260 PLEKHG5O94827 1062 aa11.9□□□□□ -0.5
CUL3-205ENST00000432260 PLCD3Q8N3E9 789 aa11.9□□□□□ -0.5
CUL3-205ENST00000432260 ZNF579Q8NAF0 562 aaKnown RBP11.9□□□□□ -0.5
CUL3-205ENST00000432260 PHF12Q96QT6 1004 aa11.85□□□□□ -0.51
CUL3-205ENST00000432260 POTEIP0CG38 1075 aa11.84□□□□□ -0.51
CUL3-205ENST00000432260 CLCN6P51797 869 aa11.82□□□□□ -0.52
CUL3-205ENST00000432260 TSPYL2Q9H2G4 693 aaPredicted RBP11.82□□□□□ -0.52
CUL3-205ENST00000432260 FBXO3Q9UK99 471 aa11.8□□□□□ -0.52
CUL3-205ENST00000432260 GALR2O43603 387 aaPredicted RBP11.78□□□□□ -0.52
CUL3-205ENST00000432260 RASEFQ8IZ41 740 aa11.75□□□□□ -0.53
CUL3-205ENST00000432260 DCBLD2Q96PD2 775 aa11.74□□□□□ -0.53
CUL3-205ENST00000432260 ZBTB47Q9UFB7 747 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms