RNA–Protein interactions for RNA: ENST00000431453.1

PMS2CL-203, Transcript of PMS2 C-terminal like pseudogene, humanhuman

TSL 3

Gene PMS2CL, Length 792 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2CL-203ENST00000431453 AEBP2Q6ZN18 517 aaPredicted RBP25.5■■□□□ 1.67
PMS2CL-203ENST00000431453 CHIC1Q5VXU3 224 aa24.78■■□□□ 1.56
PMS2CL-203ENST00000431453 PHF23Q9BUL5 403 aaPredicted RBP21.88■■□□□ 1.09
PMS2CL-203ENST00000431453 SENP3Q9H4L4 574 aaPredicted RBP21.48■■□□□ 1.03
PMS2CL-203ENST00000431453 FOXD1Q16676 465 aa20.04■□□□□ 0.8
PMS2CL-203ENST00000431453 PLPPR3Q6T4P5 718 aa20.04■□□□□ 0.8
PMS2CL-203ENST00000431453 PPP6R1Q9UPN7 881 aa19.3■□□□□ 0.68
PMS2CL-203ENST00000431453 ADRA2BP18089 450 aa19.25■□□□□ 0.67
PMS2CL-203ENST00000431453 PIAS4Q8N2W9 510 aaPredicted RBP18.83■□□□□ 0.6
PMS2CL-203ENST00000431453 MSH5O43196 834 aa18.36■□□□□ 0.53
PMS2CL-203ENST00000431453 PPP4R3CPQ6ZMV5 832 aa17.7■□□□□ 0.42
PMS2CL-203ENST00000431453 MAPK8IP2Q13387 824 aaPredicted RBP17.5■□□□□ 0.39
PMS2CL-203ENST00000431453 SCAF1Q9H7N4 1312 aaKnown RBP17.41■□□□□ 0.38
PMS2CL-203ENST00000431453 KCNA4P22459 653 aa17.32■□□□□ 0.36
PMS2CL-203ENST00000431453 DMRT2Q9Y5R5 561 aa17.19■□□□□ 0.34
PMS2CL-203ENST00000431453 CNKSR2Q8WXI2 1034 aa17.17■□□□□ 0.34
PMS2CL-203ENST00000431453 NCBP3Q53F19 620 aaKnown RBP17.1■□□□□ 0.33
PMS2CL-203ENST00000431453 NPM3O75607 178 aaKnown RBP17.02■□□□□ 0.32
PMS2CL-203ENST00000431453 POTEDQ86YR6 584 aa16.88■□□□□ 0.29
PMS2CL-203ENST00000431453 RNF216Q9NWF9 866 aaPredicted RBP16.85■□□□□ 0.29
PMS2CL-203ENST00000431453 HOXD11P31277 338 aaPredicted RBP16.83■□□□□ 0.28
PMS2CL-203ENST00000431453 DNAJC5BQ9UF47 199 aa16.49■□□□□ 0.23
PMS2CL-203ENST00000431453 SLC4A1APQ9BWU0 796 aaKnown RBP16.41■□□□□ 0.22
PMS2CL-203ENST00000431453 DCAF8L1A6NGE4 600 aa16.38■□□□□ 0.21
PMS2CL-203ENST00000431453 SLC4A2P04920 1241 aa16.12■□□□□ 0.17
PMS2CL-203ENST00000431453 ZBTB22O15209 634 aa16.02■□□□□ 0.16
PMS2CL-203ENST00000431453 EHMT2Q96KQ7 1210 aa15.97■□□□□ 0.15
PMS2CL-203ENST00000431453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.96■□□□□ 0.15
PMS2CL-203ENST00000431453 FOXD4L1Q9NU39 408 aa15.88■□□□□ 0.13
PMS2CL-203ENST00000431453 CSRNP3Q8WYN3 585 aa15.83■□□□□ 0.12
PMS2CL-203ENST00000431453 U3KPZ7 1027 aaPredicted RBP15.83■□□□□ 0.12
PMS2CL-203ENST00000431453 RNF39Q9H2S5 420 aa15.82■□□□□ 0.12
PMS2CL-203ENST00000431453 MYCNP04198 464 aaPredicted RBP15.65■□□□□ 0.1
PMS2CL-203ENST00000431453 C1QBPQ07021 282 aaKnown RBP15.54■□□□□ 0.08
PMS2CL-203ENST00000431453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.41■□□□□ 0.06
PMS2CL-203ENST00000431453 HNRNPUL2Q1KMD3 747 aaKnown RBP15.41■□□□□ 0.06
PMS2CL-203ENST00000431453 SAMD1Q6SPF0 538 aaPredicted RBP15.41■□□□□ 0.06
PMS2CL-203ENST00000431453 SPINK5Q9NQ38 1064 aaPredicted RBP15.39■□□□□ 0.05
PMS2CL-203ENST00000431453 ATF5Q9Y2D1 282 aaPredicted RBP15.37■□□□□ 0.05
PMS2CL-203ENST00000431453 CACNB1Q02641 598 aaPredicted RBP15.35■□□□□ 0.05
PMS2CL-203ENST00000431453 ATXN8OSP0DMR3 200 aa15.27■□□□□ 0.04
PMS2CL-203ENST00000431453 CAPN15O75808 1086 aa15.22■□□□□ 0.03
PMS2CL-203ENST00000431453 APLP2Q06481 763 aa15.22■□□□□ 0.03
PMS2CL-203ENST00000431453 TRHP20396 242 aaPredicted RBP15.17■□□□□ 0.02
PMS2CL-203ENST00000431453 ZNF219Q9P2Y4 722 aaPredicted RBP15.12■□□□□ 0.01
PMS2CL-203ENST00000431453 DSG3P32926 999 aa15.04■□□□□ -0
PMS2CL-203ENST00000431453 ABCB7O75027 752 aa15.01□□□□□ -0.01
PMS2CL-203ENST00000431453 POLA2Q14181 598 aa14.92□□□□□ -0.02
PMS2CL-203ENST00000431453 MKRN4PQ13434 485 aaPredicted RBP14.69□□□□□ -0.06
PMS2CL-203ENST00000431453 ZBTB12Q9Y330 459 aaPredicted RBP14.58□□□□□ -0.08
PMS2CL-203ENST00000431453 FBLN2P98095 1184 aa14.52□□□□□ -0.09
PMS2CL-203ENST00000431453 OSCARQ8IYS5 282 aa14.48□□□□□ -0.09
PMS2CL-203ENST00000431453 FKBP8Q14318 412 aa14.26□□□□□ -0.13
PMS2CL-203ENST00000431453 SPDYE2BA6NHP3 402 aa14.25□□□□□ -0.13
PMS2CL-203ENST00000431453 SPDYE6P0CI01 402 aa14.25□□□□□ -0.13
PMS2CL-203ENST00000431453 SPDYE2Q495Y8 402 aa14.25□□□□□ -0.13
PMS2CL-203ENST00000431453 SPDYE4A6NLX3 237 aa14.23□□□□□ -0.13
PMS2CL-203ENST00000431453 RBM42Q9BTD8 480 aaKnown RBP14.22□□□□□ -0.13
PMS2CL-203ENST00000431453 SSUH2Q9Y2M2 353 aa14.21□□□□□ -0.13
PMS2CL-203ENST00000431453 ZNF692Q9BU19 519 aaPredicted RBP14.18□□□□□ -0.14
PMS2CL-203ENST00000431453 PROM2Q8N271 834 aa14.08□□□□□ -0.16
PMS2CL-203ENST00000431453 AKT1S1Q96B36 256 aa14.08□□□□□ -0.16
PMS2CL-203ENST00000431453 PABPN1Q86U42 306 aaKnown RBP eCLIP14.03□□□□□ -0.16
PMS2CL-203ENST00000431453 REM2Q8IYK8 340 aaPredicted RBP13.99□□□□□ -0.17
PMS2CL-203ENST00000431453 PITPNM1O00562 1244 aa13.88□□□□□ -0.19
PMS2CL-203ENST00000431453 SPDYE1Q8NFV5 336 aaPredicted RBP13.81□□□□□ -0.2
PMS2CL-203ENST00000431453 CLEC11AQ9Y240 323 aa13.76□□□□□ -0.21
PMS2CL-203ENST00000431453 CHRDL2Q6WN34 429 aa13.71□□□□□ -0.21
PMS2CL-203ENST00000431453 STAG3Q9UJ98 1225 aa13.68□□□□□ -0.22
PMS2CL-203ENST00000431453 FBXO3Q9UK99 471 aa13.63□□□□□ -0.23
PMS2CL-203ENST00000431453 PRR29P0C7W0 189 aa13.61□□□□□ -0.23
PMS2CL-203ENST00000431453 FXR2P51116 673 aaKnown RBP eCLIP13.59□□□□□ -0.23
PMS2CL-203ENST00000431453 VASPP50552 380 aaPredicted RBP13.57□□□□□ -0.24
PMS2CL-203ENST00000431453 PIP4P2Q8N4L2 257 aa13.57□□□□□ -0.24
PMS2CL-203ENST00000431453 CREBZFQ9NS37 354 aa13.54□□□□□ -0.24
PMS2CL-203ENST00000431453 CHADLQ6NUI6 762 aa13.53□□□□□ -0.24
PMS2CL-203ENST00000431453 PRKAR2AP13861 404 aaKnown RBP13.47□□□□□ -0.25
PMS2CL-203ENST00000431453 MNX1P50219 401 aaPredicted RBP13.44□□□□□ -0.26
PMS2CL-203ENST00000431453 MIER1Q8N108 512 aa13.44□□□□□ -0.26
PMS2CL-203ENST00000431453 IFNLR1Q8IU57 520 aaPredicted RBP13.42□□□□□ -0.26
PMS2CL-203ENST00000431453 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
PMS2CL-203ENST00000431453 FARP1Q9Y4F1 1045 aaPredicted RBP13.34□□□□□ -0.27
PMS2CL-203ENST00000431453 POTEHQ6S545 545 aa13.32□□□□□ -0.28
PMS2CL-203ENST00000431453 PLEKHG5O94827 1062 aa13.27□□□□□ -0.29
PMS2CL-203ENST00000431453 KLHL34Q8N239 644 aa13.24□□□□□ -0.29
PMS2CL-203ENST00000431453 NUBP1P53384 320 aa13.21□□□□□ -0.29
PMS2CL-203ENST00000431453 ZBTB47Q9UFB7 747 aaPredicted RBP13.21□□□□□ -0.29
PMS2CL-203ENST00000431453 RASEFQ8IZ41 740 aa13.18□□□□□ -0.3
PMS2CL-203ENST00000431453 SPOCK2Q92563 424 aa13.18□□□□□ -0.3
PMS2CL-203ENST00000431453 NPM1P06748 294 aaKnown RBP eCLIP13.17□□□□□ -0.3
PMS2CL-203ENST00000431453 C19orf67A6NJJ6 358 aa13.14□□□□□ -0.31
PMS2CL-203ENST00000431453 EVX2Q03828 476 aa13.1□□□□□ -0.31
PMS2CL-203ENST00000431453 CD44P16070 742 aaKnown RBP13.08□□□□□ -0.32
PMS2CL-203ENST00000431453 HAX1O00165 279 aa13.05□□□□□ -0.32
PMS2CL-203ENST00000431453 TSPYL2Q9H2G4 693 aaPredicted RBP13.04□□□□□ -0.32
PMS2CL-203ENST00000431453 FAM212AQ96EL1 285 aa13.01□□□□□ -0.33
PMS2CL-203ENST00000431453 CCDC61Q9Y6R9 512 aa13□□□□□ -0.33
PMS2CL-203ENST00000431453 ZRANB1Q9UGI0 708 aa12.99□□□□□ -0.33
PMS2CL-203ENST00000431453 PKD2Q13563 968 aa12.98□□□□□ -0.33
PMS2CL-203ENST00000431453 DCAF8Q5TAQ9 597 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms