RNA–Protein interactions for RNA: ENST00000428436.1

RPL13AP17-203, Transcript of ribosomal protein L13a pseudogene 17, humanhuman

TSL 4

Gene RPL13AP17, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP17-203ENST00000428436 AEBP2Q6ZN18 517 aaPredicted RBP17.25■□□□□ 0.35
RPL13AP17-203ENST00000428436 CHIC1Q5VXU3 224 aa16.11■□□□□ 0.17
RPL13AP17-203ENST00000428436 SENP3Q9H4L4 574 aaPredicted RBP14.74□□□□□ -0.05
RPL13AP17-203ENST00000428436 PHF23Q9BUL5 403 aaPredicted RBP14.53□□□□□ -0.08
RPL13AP17-203ENST00000428436 FOXD1Q16676 465 aa13.79□□□□□ -0.2
RPL13AP17-203ENST00000428436 POTEDQ86YR6 584 aa13.14□□□□□ -0.31
RPL13AP17-203ENST00000428436 MSH5O43196 834 aa12.98□□□□□ -0.33
RPL13AP17-203ENST00000428436 PIAS4Q8N2W9 510 aaPredicted RBP12.83□□□□□ -0.36
RPL13AP17-203ENST00000428436 PLPPR3Q6T4P5 718 aa12.75□□□□□ -0.37
RPL13AP17-203ENST00000428436 PPP6R1Q9UPN7 881 aa12.69□□□□□ -0.38
RPL13AP17-203ENST00000428436 ADRA2BP18089 450 aa12.65□□□□□ -0.38
RPL13AP17-203ENST00000428436 MAPK8IP2Q13387 824 aaPredicted RBP11.7□□□□□ -0.54
RPL13AP17-203ENST00000428436 DMRT2Q9Y5R5 561 aa11.65□□□□□ -0.54
RPL13AP17-203ENST00000428436 SCAF1Q9H7N4 1312 aaKnown RBP11.55□□□□□ -0.56
RPL13AP17-203ENST00000428436 CACNB1Q02641 598 aaPredicted RBP11.34□□□□□ -0.59
RPL13AP17-203ENST00000428436 DCAF8L1A6NGE4 600 aa11.24□□□□□ -0.61
RPL13AP17-203ENST00000428436 PPP4R3CPQ6ZMV5 832 aa11.16□□□□□ -0.62
RPL13AP17-203ENST00000428436 HOXD11P31277 338 aaPredicted RBP11.11□□□□□ -0.63
RPL13AP17-203ENST00000428436 RNF39Q9H2S5 420 aa11.05□□□□□ -0.64
RPL13AP17-203ENST00000428436 CNKSR2Q8WXI2 1034 aa11□□□□□ -0.65
RPL13AP17-203ENST00000428436 RNF216Q9NWF9 866 aaPredicted RBP10.96□□□□□ -0.65
RPL13AP17-203ENST00000428436 C1QBPQ07021 282 aaKnown RBP10.87□□□□□ -0.67
RPL13AP17-203ENST00000428436 DNAJC5BQ9UF47 199 aa10.73□□□□□ -0.69
RPL13AP17-203ENST00000428436 NCBP3Q53F19 620 aaKnown RBP10.64□□□□□ -0.71
RPL13AP17-203ENST00000428436 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.62□□□□□ -0.71
RPL13AP17-203ENST00000428436 NPM3O75607 178 aaKnown RBP10.49□□□□□ -0.73
RPL13AP17-203ENST00000428436 U3KPZ7 1027 aaPredicted RBP10.36□□□□□ -0.75
RPL13AP17-203ENST00000428436 CAPN15O75808 1086 aa10.3□□□□□ -0.76
RPL13AP17-203ENST00000428436 SPINK5Q9NQ38 1064 aaPredicted RBP10.29□□□□□ -0.76
RPL13AP17-203ENST00000428436 DSG3P32926 999 aa10.27□□□□□ -0.77
RPL13AP17-203ENST00000428436 POTEHQ6S545 545 aa10.24□□□□□ -0.77
RPL13AP17-203ENST00000428436 SLC4A2P04920 1241 aa10.09□□□□□ -0.79
RPL13AP17-203ENST00000428436 TRHP20396 242 aaPredicted RBP10.08□□□□□ -0.8
RPL13AP17-203ENST00000428436 KCNA4P22459 653 aa10.07□□□□□ -0.8
RPL13AP17-203ENST00000428436 ABCB7O75027 752 aa10.05□□□□□ -0.8
RPL13AP17-203ENST00000428436 APLP2Q06481 763 aa10.02□□□□□ -0.81
RPL13AP17-203ENST00000428436 ZNF219Q9P2Y4 722 aaPredicted RBP10.01□□□□□ -0.81
RPL13AP17-203ENST00000428436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.94□□□□□ -0.82
RPL13AP17-203ENST00000428436 HNRNPUL2Q1KMD3 747 aaKnown RBP9.94□□□□□ -0.82
RPL13AP17-203ENST00000428436 SAMD1Q6SPF0 538 aaPredicted RBP9.88□□□□□ -0.83
RPL13AP17-203ENST00000428436 RBM42Q9BTD8 480 aaKnown RBP9.8□□□□□ -0.84
RPL13AP17-203ENST00000428436 POLA2Q14181 598 aa9.73□□□□□ -0.85
RPL13AP17-203ENST00000428436 CHRDL2Q6WN34 429 aa9.71□□□□□ -0.86
RPL13AP17-203ENST00000428436 MYCNP04198 464 aaPredicted RBP9.7□□□□□ -0.86
RPL13AP17-203ENST00000428436 AKT1S1Q96B36 256 aa9.52□□□□□ -0.89
RPL13AP17-203ENST00000428436 ATF5Q9Y2D1 282 aaPredicted RBP9.52□□□□□ -0.89
RPL13AP17-203ENST00000428436 SP7Q8TDD2 431 aaPredicted RBP9.48□□□□□ -0.89
RPL13AP17-203ENST00000428436 ZBTB12Q9Y330 459 aaPredicted RBP9.48□□□□□ -0.89
RPL13AP17-203ENST00000428436 FOXD4L1Q9NU39 408 aa9.46□□□□□ -0.9
RPL13AP17-203ENST00000428436 REM2Q8IYK8 340 aaPredicted RBP9.45□□□□□ -0.9
RPL13AP17-203ENST00000428436 SLC4A1APQ9BWU0 796 aaKnown RBP9.45□□□□□ -0.9
RPL13AP17-203ENST00000428436 OSCARQ8IYS5 282 aa9.43□□□□□ -0.9
RPL13AP17-203ENST00000428436 PIP4P2Q8N4L2 257 aa9.43□□□□□ -0.9
RPL13AP17-203ENST00000428436 PITPNM1O00562 1244 aa9.36□□□□□ -0.91
RPL13AP17-203ENST00000428436 HAX1O00165 279 aa9.34□□□□□ -0.91
RPL13AP17-203ENST00000428436 FXR2P51116 673 aaKnown RBP eCLIP9.31□□□□□ -0.92
RPL13AP17-203ENST00000428436 ZBTB22O15209 634 aa9.24□□□□□ -0.93
RPL13AP17-203ENST00000428436 EVX2Q03828 476 aa9.2□□□□□ -0.94
RPL13AP17-203ENST00000428436 SPDYE2BA6NHP3 402 aa9.18□□□□□ -0.94
RPL13AP17-203ENST00000428436 SPDYE6P0CI01 402 aa9.18□□□□□ -0.94
RPL13AP17-203ENST00000428436 SPDYE2Q495Y8 402 aa9.18□□□□□ -0.94
RPL13AP17-203ENST00000428436 ATXN8OSP0DMR3 200 aa9.17□□□□□ -0.94
RPL13AP17-203ENST00000428436 FBLN2P98095 1184 aa9.17□□□□□ -0.94
RPL13AP17-203ENST00000428436 PRKAR2AP13861 404 aaKnown RBP9.12□□□□□ -0.95
RPL13AP17-203ENST00000428436 CLEC11AQ9Y240 323 aa9.12□□□□□ -0.95
RPL13AP17-203ENST00000428436 SPDYE1Q8NFV5 336 aaPredicted RBP9.09□□□□□ -0.95
RPL13AP17-203ENST00000428436 MKRN4PQ13434 485 aaPredicted RBP9.06□□□□□ -0.96
RPL13AP17-203ENST00000428436 ZNF692Q9BU19 519 aaPredicted RBP9.05□□□□□ -0.96
RPL13AP17-203ENST00000428436 C19orf67A6NJJ6 358 aa9.02□□□□□ -0.97
RPL13AP17-203ENST00000428436 SSUH2Q9Y2M2 353 aa9.02□□□□□ -0.97
RPL13AP17-203ENST00000428436 GABBR2O75899 941 aa8.97□□□□□ -0.97
RPL13AP17-203ENST00000428436 CHADLQ6NUI6 762 aa8.97□□□□□ -0.97
RPL13AP17-203ENST00000428436 PRR29P0C7W0 189 aa8.92□□□□□ -0.98
RPL13AP17-203ENST00000428436 PABPN1Q86U42 306 aaKnown RBP eCLIP8.91□□□□□ -0.98
RPL13AP17-203ENST00000428436 LHX8Q68G74 356 aa8.9□□□□□ -0.98
RPL13AP17-203ENST00000428436 EHMT2Q96KQ7 1210 aa8.88□□□□□ -0.99
RPL13AP17-203ENST00000428436 CSRNP3Q8WYN3 585 aa8.84□□□□□ -0.99
RPL13AP17-203ENST00000428436 CD44P16070 742 aaKnown RBP8.81□□□□□ -1
RPL13AP17-203ENST00000428436 FARP1Q9Y4F1 1045 aaPredicted RBP8.79□□□□□ -1
RPL13AP17-203ENST00000428436 POTEIP0CG38 1075 aa8.77□□□□□ -1.01
RPL13AP17-203ENST00000428436 CLCN6P51797 869 aa8.69□□□□□ -1.02
RPL13AP17-203ENST00000428436 DCBLD2Q96PD2 775 aa8.69□□□□□ -1.02
RPL13AP17-203ENST00000428436 ZRANB1Q9UGI0 708 aa8.66□□□□□ -1.02
RPL13AP17-203ENST00000428436 ZNF579Q8NAF0 562 aaKnown RBP8.64□□□□□ -1.03
RPL13AP17-203ENST00000428436 CREBZFQ9NS37 354 aa8.62□□□□□ -1.03
RPL13AP17-203ENST00000428436 GALR2O43603 387 aaPredicted RBP8.58□□□□□ -1.04
RPL13AP17-203ENST00000428436 PLSCR2Q9NRY7 297 aa8.58□□□□□ -1.04
RPL13AP17-203ENST00000428436 STAG3Q9UJ98 1225 aa8.58□□□□□ -1.04
RPL13AP17-203ENST00000428436 PAK3O75914 559 aaPredicted RBP8.52□□□□□ -1.05
RPL13AP17-203ENST00000428436 PHF12Q96QT6 1004 aa8.52□□□□□ -1.05
RPL13AP17-203ENST00000428436 SPDYE4A6NLX3 237 aa8.51□□□□□ -1.05
RPL13AP17-203ENST00000428436 OTUD5Q96G74 571 aa8.5□□□□□ -1.05
RPL13AP17-203ENST00000428436 POTEB2H3BUK9 544 aa8.49□□□□□ -1.05
RPL13AP17-203ENST00000428436 NPM1P06748 294 aaKnown RBP eCLIP8.45□□□□□ -1.06
RPL13AP17-203ENST00000428436 PELP1Q8IZL8 1130 aaKnown RBP8.44□□□□□ -1.06
RPL13AP17-203ENST00000428436 MNX1P50219 401 aaPredicted RBP8.42□□□□□ -1.06
RPL13AP17-203ENST00000428436 POTEMA6NI47 508 aa8.39□□□□□ -1.07
RPL13AP17-203ENST00000428436 MS4A3Q96HJ5 214 aa8.39□□□□□ -1.07
RPL13AP17-203ENST00000428436 METRNQ9UJH8 293 aa8.37□□□□□ -1.07
RPL13AP17-203ENST00000428436 POTEGQ6S5H5 508 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms