RNA–Protein interactions for RNA: ENST00000427509.5

LINC01410-202, Transcript of long intergenic non-protein coding RNA 1410, humanhuman

TSL 1 (best)

Gene LINC01410, Length 647 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01410-202ENST00000427509 AEBP2Q6ZN18 517 aaPredicted RBP25.98■■□□□ 1.75
LINC01410-202ENST00000427509 CHIC1Q5VXU3 224 aa25.12■■□□□ 1.61
LINC01410-202ENST00000427509 SENP3Q9H4L4 574 aaPredicted RBP22.15■■□□□ 1.14
LINC01410-202ENST00000427509 PHF23Q9BUL5 403 aaPredicted RBP22.03■■□□□ 1.12
LINC01410-202ENST00000427509 FOXD1Q16676 465 aa20.56■□□□□ 0.88
LINC01410-202ENST00000427509 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
LINC01410-202ENST00000427509 PPP6R1Q9UPN7 881 aa19.55■□□□□ 0.72
LINC01410-202ENST00000427509 ADRA2BP18089 450 aa19.53■□□□□ 0.72
LINC01410-202ENST00000427509 PIAS4Q8N2W9 510 aaPredicted RBP19.34■□□□□ 0.69
LINC01410-202ENST00000427509 MSH5O43196 834 aa19.12■□□□□ 0.65
LINC01410-202ENST00000427509 SCAF1Q9H7N4 1312 aaKnown RBP17.96■□□□□ 0.46
LINC01410-202ENST00000427509 POTEDQ86YR6 584 aa17.89■□□□□ 0.45
LINC01410-202ENST00000427509 PPP4R3CPQ6ZMV5 832 aa17.84■□□□□ 0.45
LINC01410-202ENST00000427509 MAPK8IP2Q13387 824 aaPredicted RBP17.81■□□□□ 0.44
LINC01410-202ENST00000427509 DMRT2Q9Y5R5 561 aa17.61■□□□□ 0.41
LINC01410-202ENST00000427509 CNKSR2Q8WXI2 1034 aa17.42■□□□□ 0.38
LINC01410-202ENST00000427509 NCBP3Q53F19 620 aaKnown RBP17.34■□□□□ 0.37
LINC01410-202ENST00000427509 RNF216Q9NWF9 866 aaPredicted RBP17.14■□□□□ 0.33
LINC01410-202ENST00000427509 HOXD11P31277 338 aaPredicted RBP17.13■□□□□ 0.33
LINC01410-202ENST00000427509 KCNA4P22459 653 aa17.06■□□□□ 0.32
LINC01410-202ENST00000427509 NPM3O75607 178 aaKnown RBP17.01■□□□□ 0.31
LINC01410-202ENST00000427509 DCAF8L1A6NGE4 600 aa16.93■□□□□ 0.3
LINC01410-202ENST00000427509 DNAJC5BQ9UF47 199 aa16.56■□□□□ 0.24
LINC01410-202ENST00000427509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.39■□□□□ 0.21
LINC01410-202ENST00000427509 RNF39Q9H2S5 420 aa16.32■□□□□ 0.2
LINC01410-202ENST00000427509 SLC4A1APQ9BWU0 796 aaKnown RBP16.23■□□□□ 0.19
LINC01410-202ENST00000427509 CACNB1Q02641 598 aaPredicted RBP16.16■□□□□ 0.18
LINC01410-202ENST00000427509 C1QBPQ07021 282 aaKnown RBP16.15■□□□□ 0.18
LINC01410-202ENST00000427509 SLC4A2P04920 1241 aa16.12■□□□□ 0.17
LINC01410-202ENST00000427509 U3KPZ7 1027 aaPredicted RBP16.01■□□□□ 0.15
LINC01410-202ENST00000427509 FOXD4L1Q9NU39 408 aa15.81■□□□□ 0.12
LINC01410-202ENST00000427509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.79■□□□□ 0.12
LINC01410-202ENST00000427509 HNRNPUL2Q1KMD3 747 aaKnown RBP15.79■□□□□ 0.12
LINC01410-202ENST00000427509 MYCNP04198 464 aaPredicted RBP15.75■□□□□ 0.11
LINC01410-202ENST00000427509 APLP2Q06481 763 aa15.71■□□□□ 0.11
LINC01410-202ENST00000427509 SAMD1Q6SPF0 538 aaPredicted RBP15.71■□□□□ 0.11
LINC01410-202ENST00000427509 CAPN15O75808 1086 aa15.67■□□□□ 0.1
LINC01410-202ENST00000427509 ZBTB22O15209 634 aa15.66■□□□□ 0.1
LINC01410-202ENST00000427509 SPINK5Q9NQ38 1064 aaPredicted RBP15.66■□□□□ 0.1
LINC01410-202ENST00000427509 TRHP20396 242 aaPredicted RBP15.52■□□□□ 0.08
LINC01410-202ENST00000427509 ZNF219Q9P2Y4 722 aaPredicted RBP15.5■□□□□ 0.07
LINC01410-202ENST00000427509 DSG3P32926 999 aa15.44■□□□□ 0.06
LINC01410-202ENST00000427509 EHMT2Q96KQ7 1210 aa15.41■□□□□ 0.06
LINC01410-202ENST00000427509 CSRNP3Q8WYN3 585 aa15.37■□□□□ 0.05
LINC01410-202ENST00000427509 ABCB7O75027 752 aa15.31■□□□□ 0.04
LINC01410-202ENST00000427509 ATXN8OSP0DMR3 200 aa15.31■□□□□ 0.04
LINC01410-202ENST00000427509 ATF5Q9Y2D1 282 aaPredicted RBP15.31■□□□□ 0.04
LINC01410-202ENST00000427509 POLA2Q14181 598 aa15.19■□□□□ 0.02
LINC01410-202ENST00000427509 ZBTB12Q9Y330 459 aaPredicted RBP14.94□□□□□ -0.02
LINC01410-202ENST00000427509 FBLN2P98095 1184 aa14.77□□□□□ -0.05
LINC01410-202ENST00000427509 RBM42Q9BTD8 480 aaKnown RBP14.76□□□□□ -0.05
LINC01410-202ENST00000427509 OSCARQ8IYS5 282 aa14.65□□□□□ -0.06
LINC01410-202ENST00000427509 MKRN4PQ13434 485 aaPredicted RBP14.62□□□□□ -0.07
LINC01410-202ENST00000427509 AKT1S1Q96B36 256 aa14.51□□□□□ -0.09
LINC01410-202ENST00000427509 SPDYE2BA6NHP3 402 aa14.5□□□□□ -0.09
LINC01410-202ENST00000427509 SPDYE6P0CI01 402 aa14.5□□□□□ -0.09
LINC01410-202ENST00000427509 SPDYE2Q495Y8 402 aa14.5□□□□□ -0.09
LINC01410-202ENST00000427509 ZNF692Q9BU19 519 aaPredicted RBP14.42□□□□□ -0.1
LINC01410-202ENST00000427509 REM2Q8IYK8 340 aaPredicted RBP14.35□□□□□ -0.11
LINC01410-202ENST00000427509 SSUH2Q9Y2M2 353 aa14.31□□□□□ -0.12
LINC01410-202ENST00000427509 CHRDL2Q6WN34 429 aa14.24□□□□□ -0.13
LINC01410-202ENST00000427509 SPDYE4A6NLX3 237 aa14.21□□□□□ -0.13
LINC01410-202ENST00000427509 PABPN1Q86U42 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
LINC01410-202ENST00000427509 PITPNM1O00562 1244 aa14.16□□□□□ -0.14
LINC01410-202ENST00000427509 SPDYE1Q8NFV5 336 aaPredicted RBP14.16□□□□□ -0.14
LINC01410-202ENST00000427509 POTEHQ6S545 545 aa14.13□□□□□ -0.15
LINC01410-202ENST00000427509 CLEC11AQ9Y240 323 aa14.11□□□□□ -0.15
LINC01410-202ENST00000427509 FXR2P51116 673 aaKnown RBP eCLIP13.98□□□□□ -0.17
LINC01410-202ENST00000427509 PIP4P2Q8N4L2 257 aa13.98□□□□□ -0.17
LINC01410-202ENST00000427509 PRR29P0C7W0 189 aa13.95□□□□□ -0.18
LINC01410-202ENST00000427509 STAG3Q9UJ98 1225 aa13.95□□□□□ -0.18
LINC01410-202ENST00000427509 FKBP8Q14318 412 aa13.93□□□□□ -0.18
LINC01410-202ENST00000427509 PROM2Q8N271 834 aa13.88□□□□□ -0.19
LINC01410-202ENST00000427509 PRKAR2AP13861 404 aaKnown RBP13.84□□□□□ -0.19
LINC01410-202ENST00000427509 CHADLQ6NUI6 762 aa13.76□□□□□ -0.21
LINC01410-202ENST00000427509 HAX1O00165 279 aa13.67□□□□□ -0.22
LINC01410-202ENST00000427509 CREBZFQ9NS37 354 aa13.65□□□□□ -0.22
LINC01410-202ENST00000427509 FARP1Q9Y4F1 1045 aaPredicted RBP13.61□□□□□ -0.23
LINC01410-202ENST00000427509 FBXO3Q9UK99 471 aa13.57□□□□□ -0.24
LINC01410-202ENST00000427509 MIER1Q8N108 512 aa13.55□□□□□ -0.24
LINC01410-202ENST00000427509 PLEKHG5O94827 1062 aa13.54□□□□□ -0.24
LINC01410-202ENST00000427509 C19orf67A6NJJ6 358 aa13.51□□□□□ -0.25
LINC01410-202ENST00000427509 NPM1P06748 294 aaKnown RBP eCLIP13.49□□□□□ -0.25
LINC01410-202ENST00000427509 PLCD3Q8N3E9 789 aa13.49□□□□□ -0.25
LINC01410-202ENST00000427509 MNX1P50219 401 aaPredicted RBP13.45□□□□□ -0.26
LINC01410-202ENST00000427509 EVX2Q03828 476 aa13.45□□□□□ -0.26
LINC01410-202ENST00000427509 SP7Q8TDD2 431 aaPredicted RBP13.44□□□□□ -0.26
LINC01410-202ENST00000427509 CD44P16070 742 aaKnown RBP13.42□□□□□ -0.26
LINC01410-202ENST00000427509 ZBTB47Q9UFB7 747 aaPredicted RBP13.37□□□□□ -0.27
LINC01410-202ENST00000427509 PAK3O75914 559 aaPredicted RBP13.33□□□□□ -0.28
LINC01410-202ENST00000427509 VASPP50552 380 aaPredicted RBP13.33□□□□□ -0.28
LINC01410-202ENST00000427509 ZRANB1Q9UGI0 708 aa13.32□□□□□ -0.28
LINC01410-202ENST00000427509 KLHL34Q8N239 644 aa13.25□□□□□ -0.29
LINC01410-202ENST00000427509 CLCN6P51797 869 aa13.22□□□□□ -0.29
LINC01410-202ENST00000427509 ZNF579Q8NAF0 562 aaKnown RBP13.22□□□□□ -0.29
LINC01410-202ENST00000427509 TSPYL2Q9H2G4 693 aaPredicted RBP13.22□□□□□ -0.29
LINC01410-202ENST00000427509 GABBR2O75899 941 aa13.21□□□□□ -0.29
LINC01410-202ENST00000427509 RASEFQ8IZ41 740 aa13.18□□□□□ -0.3
LINC01410-202ENST00000427509 NUBP1P53384 320 aa13.17□□□□□ -0.3
LINC01410-202ENST00000427509 IFNLR1Q8IU57 520 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms