RNA–Protein interactions for RNA: ENST00000426319.1

VPS8-206, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-206ENST00000426319 AEBP2Q6ZN18 517 aaPredicted RBP27.07■■□□□ 1.92
VPS8-206ENST00000426319 CHIC1Q5VXU3 224 aa26.6■■□□□ 1.85
VPS8-206ENST00000426319 PHF23Q9BUL5 403 aaPredicted RBP23.38■■□□□ 1.33
VPS8-206ENST00000426319 SENP3Q9H4L4 574 aaPredicted RBP22.98■■□□□ 1.27
VPS8-206ENST00000426319 PLPPR3Q6T4P5 718 aa21.66■■□□□ 1.06
VPS8-206ENST00000426319 FOXD1Q16676 465 aa21.29■■□□□ 1
VPS8-206ENST00000426319 PPP6R1Q9UPN7 881 aa20.58■□□□□ 0.89
VPS8-206ENST00000426319 ADRA2BP18089 450 aa20.54■□□□□ 0.88
VPS8-206ENST00000426319 PIAS4Q8N2W9 510 aaPredicted RBP20.08■□□□□ 0.81
VPS8-206ENST00000426319 MSH5O43196 834 aa19.62■□□□□ 0.73
VPS8-206ENST00000426319 PPP4R3CPQ6ZMV5 832 aa19.08■□□□□ 0.64
VPS8-206ENST00000426319 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
VPS8-206ENST00000426319 KCNA4P22459 653 aa18.75■□□□□ 0.59
VPS8-206ENST00000426319 NCBP3Q53F19 620 aaKnown RBP18.65■□□□□ 0.58
VPS8-206ENST00000426319 MAPK8IP2Q13387 824 aaPredicted RBP18.6■□□□□ 0.57
VPS8-206ENST00000426319 CNKSR2Q8WXI2 1034 aa18.55■□□□□ 0.56
VPS8-206ENST00000426319 DMRT2Q9Y5R5 561 aa18.37■□□□□ 0.53
VPS8-206ENST00000426319 NPM3O75607 178 aaKnown RBP18.33■□□□□ 0.52
VPS8-206ENST00000426319 RNF216Q9NWF9 866 aaPredicted RBP18.16■□□□□ 0.5
VPS8-206ENST00000426319 HOXD11P31277 338 aaPredicted RBP18.07■□□□□ 0.48
VPS8-206ENST00000426319 DNAJC5BQ9UF47 199 aa17.92■□□□□ 0.46
VPS8-206ENST00000426319 SLC4A1APQ9BWU0 796 aaKnown RBP17.89■□□□□ 0.45
VPS8-206ENST00000426319 POTEDQ86YR6 584 aa17.6■□□□□ 0.41
VPS8-206ENST00000426319 DCAF8L1A6NGE4 600 aa17.47■□□□□ 0.39
VPS8-206ENST00000426319 EHMT2Q96KQ7 1210 aa17.46■□□□□ 0.39
VPS8-206ENST00000426319 SLC4A2P04920 1241 aa17.29■□□□□ 0.36
VPS8-206ENST00000426319 CSRNP3Q8WYN3 585 aa17.28■□□□□ 0.36
VPS8-206ENST00000426319 ZBTB22O15209 634 aa17.25■□□□□ 0.35
VPS8-206ENST00000426319 FOXD4L1Q9NU39 408 aa17.25■□□□□ 0.35
VPS8-206ENST00000426319 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.15■□□□□ 0.34
VPS8-206ENST00000426319 MYCNP04198 464 aaPredicted RBP16.96■□□□□ 0.31
VPS8-206ENST00000426319 U3KPZ7 1027 aaPredicted RBP16.9■□□□□ 0.3
VPS8-206ENST00000426319 RNF39Q9H2S5 420 aa16.82■□□□□ 0.28
VPS8-206ENST00000426319 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.79■□□□□ 0.28
VPS8-206ENST00000426319 HNRNPUL2Q1KMD3 747 aaKnown RBP16.79■□□□□ 0.28
VPS8-206ENST00000426319 SAMD1Q6SPF0 538 aaPredicted RBP16.71■□□□□ 0.27
VPS8-206ENST00000426319 ATXN8OSP0DMR3 200 aa16.7■□□□□ 0.26
VPS8-206ENST00000426319 C1QBPQ07021 282 aaKnown RBP16.64■□□□□ 0.25
VPS8-206ENST00000426319 APLP2Q06481 763 aa16.58■□□□□ 0.24
VPS8-206ENST00000426319 ATF5Q9Y2D1 282 aaPredicted RBP16.45■□□□□ 0.22
VPS8-206ENST00000426319 SPINK5Q9NQ38 1064 aaPredicted RBP16.37■□□□□ 0.21
VPS8-206ENST00000426319 ZNF219Q9P2Y4 722 aaPredicted RBP16.3■□□□□ 0.2
VPS8-206ENST00000426319 CAPN15O75808 1086 aa16.29■□□□□ 0.2
VPS8-206ENST00000426319 CACNB1Q02641 598 aaPredicted RBP16.25■□□□□ 0.19
VPS8-206ENST00000426319 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
VPS8-206ENST00000426319 POLA2Q14181 598 aa16.04■□□□□ 0.16
VPS8-206ENST00000426319 DSG3P32926 999 aa16.03■□□□□ 0.16
VPS8-206ENST00000426319 ABCB7O75027 752 aa15.97■□□□□ 0.15
VPS8-206ENST00000426319 ZBTB12Q9Y330 459 aaPredicted RBP15.83■□□□□ 0.12
VPS8-206ENST00000426319 FBLN2P98095 1184 aa15.78■□□□□ 0.12
VPS8-206ENST00000426319 MKRN4PQ13434 485 aaPredicted RBP15.76■□□□□ 0.11
VPS8-206ENST00000426319 FKBP8Q14318 412 aa15.58■□□□□ 0.08
VPS8-206ENST00000426319 SPDYE4A6NLX3 237 aa15.47■□□□□ 0.07
VPS8-206ENST00000426319 OSCARQ8IYS5 282 aa15.46■□□□□ 0.07
VPS8-206ENST00000426319 SPDYE2BA6NHP3 402 aa15.41■□□□□ 0.06
VPS8-206ENST00000426319 SPDYE6P0CI01 402 aa15.41■□□□□ 0.06
VPS8-206ENST00000426319 SPDYE2Q495Y8 402 aa15.41■□□□□ 0.06
VPS8-206ENST00000426319 ZNF692Q9BU19 519 aaPredicted RBP15.33■□□□□ 0.04
VPS8-206ENST00000426319 RBM42Q9BTD8 480 aaKnown RBP15.3■□□□□ 0.04
VPS8-206ENST00000426319 SSUH2Q9Y2M2 353 aa15.3■□□□□ 0.04
VPS8-206ENST00000426319 PROM2Q8N271 834 aa15.29■□□□□ 0.04
VPS8-206ENST00000426319 AKT1S1Q96B36 256 aa15.14■□□□□ 0.01
VPS8-206ENST00000426319 PABPN1Q86U42 306 aaKnown RBP eCLIP15.12■□□□□ 0.01
VPS8-206ENST00000426319 FBXO3Q9UK99 471 aa15.06■□□□□ 0
VPS8-206ENST00000426319 REM2Q8IYK8 340 aaPredicted RBP14.97□□□□□ -0.01
VPS8-206ENST00000426319 STAG3Q9UJ98 1225 aa14.96□□□□□ -0.01
VPS8-206ENST00000426319 SPDYE1Q8NFV5 336 aaPredicted RBP14.9□□□□□ -0.02
VPS8-206ENST00000426319 VASPP50552 380 aaPredicted RBP14.81□□□□□ -0.04
VPS8-206ENST00000426319 PITPNM1O00562 1244 aa14.77□□□□□ -0.05
VPS8-206ENST00000426319 CLEC11AQ9Y240 323 aa14.77□□□□□ -0.05
VPS8-206ENST00000426319 PRR29P0C7W0 189 aa14.71□□□□□ -0.05
VPS8-206ENST00000426319 MIER1Q8N108 512 aa14.66□□□□□ -0.06
VPS8-206ENST00000426319 PLCD3Q8N3E9 789 aa14.64□□□□□ -0.07
VPS8-206ENST00000426319 IFNLR1Q8IU57 520 aaPredicted RBP14.62□□□□□ -0.07
VPS8-206ENST00000426319 PLEKHG5O94827 1062 aa14.59□□□□□ -0.07
VPS8-206ENST00000426319 CHRDL2Q6WN34 429 aa14.58□□□□□ -0.08
VPS8-206ENST00000426319 CREBZFQ9NS37 354 aa14.54□□□□□ -0.08
VPS8-206ENST00000426319 ZBTB47Q9UFB7 747 aaPredicted RBP14.52□□□□□ -0.09
VPS8-206ENST00000426319 FXR2P51116 673 aaKnown RBP eCLIP14.51□□□□□ -0.09
VPS8-206ENST00000426319 KLHL34Q8N239 644 aa14.5□□□□□ -0.09
VPS8-206ENST00000426319 AMER1Q5JTC6 1135 aaPredicted RBP14.46□□□□□ -0.09
VPS8-206ENST00000426319 SPOCK2Q92563 424 aa14.44□□□□□ -0.1
VPS8-206ENST00000426319 MNX1P50219 401 aaPredicted RBP14.43□□□□□ -0.1
VPS8-206ENST00000426319 PIP4P2Q8N4L2 257 aa14.43□□□□□ -0.1
VPS8-206ENST00000426319 PRKAR2AP13861 404 aaKnown RBP14.41□□□□□ -0.1
VPS8-206ENST00000426319 CHADLQ6NUI6 762 aa14.4□□□□□ -0.1
VPS8-206ENST00000426319 RTN4Q9NQC3 1192 aaKnown RBP14.37□□□□□ -0.11
VPS8-206ENST00000426319 NPM1P06748 294 aaKnown RBP eCLIP14.33□□□□□ -0.12
VPS8-206ENST00000426319 FARP1Q9Y4F1 1045 aaPredicted RBP14.33□□□□□ -0.12
VPS8-206ENST00000426319 NUBP1P53384 320 aa14.29□□□□□ -0.12
VPS8-206ENST00000426319 PKD2Q13563 968 aa14.18□□□□□ -0.14
VPS8-206ENST00000426319 GSE1Q14687 1217 aa14.18□□□□□ -0.14
VPS8-206ENST00000426319 RASEFQ8IZ41 740 aa14.17□□□□□ -0.14
VPS8-206ENST00000426319 FAM212AQ96EL1 285 aa14.16□□□□□ -0.14
VPS8-206ENST00000426319 CIZ1Q9ULV3 898 aaPredicted RBP14.15□□□□□ -0.14
VPS8-206ENST00000426319 DCAF8Q5TAQ9 597 aa14.14□□□□□ -0.15
VPS8-206ENST00000426319 TRIM41Q8WV44 630 aa14.1□□□□□ -0.15
VPS8-206ENST00000426319 ECM2O94769 699 aaPredicted RBP14.05□□□□□ -0.16
VPS8-206ENST00000426319 PAK3O75914 559 aaPredicted RBP14.03□□□□□ -0.16
VPS8-206ENST00000426319 TSPYL2Q9H2G4 693 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms