RNA–Protein interactions for RNA: ENST00000425376.5

LINC00113-202, long intergenic non-protein coding RNA 113, humanhuman

TSL 5

Gene LINC00113, Length 509 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00113-202ENST00000425376 AEBP2Q6ZN18 517 aaPredicted RBP21.51■■□□□ 1.03
LINC00113-202ENST00000425376 CHIC1Q5VXU3 224 aa20.17■□□□□ 0.82
LINC00113-202ENST00000425376 SENP3Q9H4L4 574 aaPredicted RBP18.5■□□□□ 0.55
LINC00113-202ENST00000425376 PHF23Q9BUL5 403 aaPredicted RBP18.15■□□□□ 0.5
LINC00113-202ENST00000425376 FOXD1Q16676 465 aa17.28■□□□□ 0.36
LINC00113-202ENST00000425376 POTEDQ86YR6 584 aa16.97■□□□□ 0.31
LINC00113-202ENST00000425376 MSH5O43196 834 aa16.44■□□□□ 0.22
LINC00113-202ENST00000425376 PIAS4Q8N2W9 510 aaPredicted RBP16.06■□□□□ 0.16
LINC00113-202ENST00000425376 PPP6R1Q9UPN7 881 aa15.69■□□□□ 0.1
LINC00113-202ENST00000425376 PLPPR3Q6T4P5 718 aa15.68■□□□□ 0.1
LINC00113-202ENST00000425376 ADRA2BP18089 450 aa15.64■□□□□ 0.09
LINC00113-202ENST00000425376 DMRT2Q9Y5R5 561 aa14.56□□□□□ -0.08
LINC00113-202ENST00000425376 MAPK8IP2Q13387 824 aaPredicted RBP14.53□□□□□ -0.08
LINC00113-202ENST00000425376 CACNB1Q02641 598 aaPredicted RBP14.47□□□□□ -0.09
LINC00113-202ENST00000425376 SCAF1Q9H7N4 1312 aaKnown RBP14.37□□□□□ -0.11
LINC00113-202ENST00000425376 DCAF8L1A6NGE4 600 aa14.08□□□□□ -0.16
LINC00113-202ENST00000425376 RNF39Q9H2S5 420 aa13.93□□□□□ -0.18
LINC00113-202ENST00000425376 HOXD11P31277 338 aaPredicted RBP13.78□□□□□ -0.2
LINC00113-202ENST00000425376 C1QBPQ07021 282 aaKnown RBP13.72□□□□□ -0.21
LINC00113-202ENST00000425376 PPP4R3CPQ6ZMV5 832 aa13.66□□□□□ -0.22
LINC00113-202ENST00000425376 CNKSR2Q8WXI2 1034 aa13.54□□□□□ -0.24
LINC00113-202ENST00000425376 RNF216Q9NWF9 866 aaPredicted RBP13.54□□□□□ -0.24
LINC00113-202ENST00000425376 DNAJC5BQ9UF47 199 aa13.41□□□□□ -0.26
LINC00113-202ENST00000425376 POTEHQ6S545 545 aa13.21□□□□□ -0.29
LINC00113-202ENST00000425376 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC00113-202ENST00000425376 NCBP3Q53F19 620 aaKnown RBP13□□□□□ -0.33
LINC00113-202ENST00000425376 CAPN15O75808 1086 aa12.87□□□□□ -0.35
LINC00113-202ENST00000425376 DSG3P32926 999 aa12.86□□□□□ -0.35
LINC00113-202ENST00000425376 U3KPZ7 1027 aaPredicted RBP12.81□□□□□ -0.36
LINC00113-202ENST00000425376 SPINK5Q9NQ38 1064 aaPredicted RBP12.8□□□□□ -0.36
LINC00113-202ENST00000425376 NPM3O75607 178 aaKnown RBP12.77□□□□□ -0.37
LINC00113-202ENST00000425376 TRHP20396 242 aaPredicted RBP12.52□□□□□ -0.41
LINC00113-202ENST00000425376 ABCB7O75027 752 aa12.5□□□□□ -0.41
LINC00113-202ENST00000425376 APLP2Q06481 763 aa12.47□□□□□ -0.41
LINC00113-202ENST00000425376 ZNF219Q9P2Y4 722 aaPredicted RBP12.46□□□□□ -0.41
LINC00113-202ENST00000425376 RBM42Q9BTD8 480 aaKnown RBP12.34□□□□□ -0.43
LINC00113-202ENST00000425376 SLC4A2P04920 1241 aa12.31□□□□□ -0.44
LINC00113-202ENST00000425376 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.3□□□□□ -0.44
LINC00113-202ENST00000425376 HNRNPUL2Q1KMD3 747 aaKnown RBP12.3□□□□□ -0.44
LINC00113-202ENST00000425376 CHRDL2Q6WN34 429 aa12.27□□□□□ -0.45
LINC00113-202ENST00000425376 SAMD1Q6SPF0 538 aaPredicted RBP12.2□□□□□ -0.46
LINC00113-202ENST00000425376 SP7Q8TDD2 431 aaPredicted RBP12.12□□□□□ -0.47
LINC00113-202ENST00000425376 KCNA4P22459 653 aa12.02□□□□□ -0.49
LINC00113-202ENST00000425376 POLA2Q14181 598 aa12.02□□□□□ -0.49
LINC00113-202ENST00000425376 AKT1S1Q96B36 256 aa11.9□□□□□ -0.5
LINC00113-202ENST00000425376 MYCNP04198 464 aaPredicted RBP11.85□□□□□ -0.51
LINC00113-202ENST00000425376 PIP4P2Q8N4L2 257 aa11.84□□□□□ -0.51
LINC00113-202ENST00000425376 HAX1O00165 279 aa11.82□□□□□ -0.52
LINC00113-202ENST00000425376 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
LINC00113-202ENST00000425376 ZBTB12Q9Y330 459 aaPredicted RBP11.77□□□□□ -0.53
LINC00113-202ENST00000425376 PITPNM1O00562 1244 aa11.68□□□□□ -0.54
LINC00113-202ENST00000425376 OSCARQ8IYS5 282 aa11.67□□□□□ -0.54
LINC00113-202ENST00000425376 FXR2P51116 673 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC00113-202ENST00000425376 ATF5Q9Y2D1 282 aaPredicted RBP11.57□□□□□ -0.56
LINC00113-202ENST00000425376 EVX2Q03828 476 aa11.56□□□□□ -0.56
LINC00113-202ENST00000425376 FOXD4L1Q9NU39 408 aa11.42□□□□□ -0.58
LINC00113-202ENST00000425376 PRKAR2AP13861 404 aaKnown RBP11.39□□□□□ -0.59
LINC00113-202ENST00000425376 LHX8Q68G74 356 aa11.36□□□□□ -0.59
LINC00113-202ENST00000425376 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
LINC00113-202ENST00000425376 C19orf67A6NJJ6 358 aa11.32□□□□□ -0.6
LINC00113-202ENST00000425376 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
LINC00113-202ENST00000425376 SPDYE2Q495Y8 402 aa11.32□□□□□ -0.6
LINC00113-202ENST00000425376 CLEC11AQ9Y240 323 aa11.32□□□□□ -0.6
LINC00113-202ENST00000425376 GABBR2O75899 941 aa11.3□□□□□ -0.6
LINC00113-202ENST00000425376 SPDYE1Q8NFV5 336 aaPredicted RBP11.29□□□□□ -0.6
LINC00113-202ENST00000425376 SLC4A1APQ9BWU0 796 aaKnown RBP11.27□□□□□ -0.61
LINC00113-202ENST00000425376 FBLN2P98095 1184 aa11.24□□□□□ -0.61
LINC00113-202ENST00000425376 PLSCR2Q9NRY7 297 aa11.17□□□□□ -0.62
LINC00113-202ENST00000425376 CHADLQ6NUI6 762 aa11.13□□□□□ -0.63
LINC00113-202ENST00000425376 ZNF692Q9BU19 519 aaPredicted RBP11.11□□□□□ -0.63
LINC00113-202ENST00000425376 ATXN8OSP0DMR3 200 aa11.1□□□□□ -0.63
LINC00113-202ENST00000425376 EHMT2Q96KQ7 1210 aa11.08□□□□□ -0.64
LINC00113-202ENST00000425376 SSUH2Q9Y2M2 353 aa11.08□□□□□ -0.64
LINC00113-202ENST00000425376 PRR29P0C7W0 189 aa11.03□□□□□ -0.64
LINC00113-202ENST00000425376 POTEIP0CG38 1075 aa11.02□□□□□ -0.65
LINC00113-202ENST00000425376 ZBTB22O15209 634 aa11.01□□□□□ -0.65
LINC00113-202ENST00000425376 MKRN4PQ13434 485 aaPredicted RBP11.01□□□□□ -0.65
LINC00113-202ENST00000425376 CD44P16070 742 aaKnown RBP11□□□□□ -0.65
LINC00113-202ENST00000425376 CLCN6P51797 869 aa10.94□□□□□ -0.66
LINC00113-202ENST00000425376 PABPN1Q86U42 306 aaKnown RBP eCLIP10.93□□□□□ -0.66
LINC00113-202ENST00000425376 CSRNP3Q8WYN3 585 aa10.93□□□□□ -0.66
LINC00113-202ENST00000425376 DCBLD2Q96PD2 775 aa10.93□□□□□ -0.66
LINC00113-202ENST00000425376 FARP1Q9Y4F1 1045 aaPredicted RBP10.9□□□□□ -0.66
LINC00113-202ENST00000425376 ZNF579Q8NAF0 562 aaKnown RBP10.78□□□□□ -0.68
LINC00113-202ENST00000425376 ZRANB1Q9UGI0 708 aa10.76□□□□□ -0.69
LINC00113-202ENST00000425376 POTEMA6NI47 508 aa10.74□□□□□ -0.69
LINC00113-202ENST00000425376 OTUD5Q96G74 571 aa10.74□□□□□ -0.69
LINC00113-202ENST00000425376 POTEGQ6S5H5 508 aa10.69□□□□□ -0.7
LINC00113-202ENST00000425376 GALR2O43603 387 aaPredicted RBP10.68□□□□□ -0.7
LINC00113-202ENST00000425376 POTEB2H3BUK9 544 aa10.65□□□□□ -0.7
LINC00113-202ENST00000425376 PAK3O75914 559 aaPredicted RBP10.6□□□□□ -0.71
LINC00113-202ENST00000425376 CREBZFQ9NS37 354 aa10.58□□□□□ -0.72
LINC00113-202ENST00000425376 PCDH10Q9P2E7 1040 aa10.58□□□□□ -0.72
LINC00113-202ENST00000425376 PHF12Q96QT6 1004 aa10.55□□□□□ -0.72
LINC00113-202ENST00000425376 STAG3Q9UJ98 1225 aa10.52□□□□□ -0.73
LINC00113-202ENST00000425376 PELP1Q8IZL8 1130 aaKnown RBP10.5□□□□□ -0.73
LINC00113-202ENST00000425376 METRNQ9UJH8 293 aa10.47□□□□□ -0.73
LINC00113-202ENST00000425376 MAMSTRQ6ZN01 415 aa10.45□□□□□ -0.74
LINC00113-202ENST00000425376 SLC39A7Q92504 469 aa10.44□□□□□ -0.74
LINC00113-202ENST00000425376 NPM1P06748 294 aaKnown RBP eCLIP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms