RNA–Protein interactions for RNA: ENST00000425190.6

CHEK2-212, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-212ENST00000425190 AEBP2Q6ZN18 517 aaPredicted RBP24.59■■□□□ 1.53
CHEK2-212ENST00000425190 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
CHEK2-212ENST00000425190 SENP3Q9H4L4 574 aaPredicted RBP21.11■□□□□ 0.97
CHEK2-212ENST00000425190 PHF23Q9BUL5 403 aaPredicted RBP20.73■□□□□ 0.91
CHEK2-212ENST00000425190 FOXD1Q16676 465 aa19.72■□□□□ 0.75
CHEK2-212ENST00000425190 POTEDQ86YR6 584 aa19.31■□□□□ 0.68
CHEK2-212ENST00000425190 MSH5O43196 834 aa18.74■□□□□ 0.59
CHEK2-212ENST00000425190 PIAS4Q8N2W9 510 aaPredicted RBP18.27■□□□□ 0.52
CHEK2-212ENST00000425190 PPP6R1Q9UPN7 881 aa17.96■□□□□ 0.47
CHEK2-212ENST00000425190 PLPPR3Q6T4P5 718 aa17.93■□□□□ 0.46
CHEK2-212ENST00000425190 ADRA2BP18089 450 aa17.85■□□□□ 0.45
CHEK2-212ENST00000425190 DMRT2Q9Y5R5 561 aa16.64■□□□□ 0.25
CHEK2-212ENST00000425190 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
CHEK2-212ENST00000425190 CACNB1Q02641 598 aaPredicted RBP16.43■□□□□ 0.22
CHEK2-212ENST00000425190 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
CHEK2-212ENST00000425190 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
CHEK2-212ENST00000425190 RNF39Q9H2S5 420 aa15.92■□□□□ 0.14
CHEK2-212ENST00000425190 HOXD11P31277 338 aaPredicted RBP15.8■□□□□ 0.12
CHEK2-212ENST00000425190 C1QBPQ07021 282 aaKnown RBP15.68■□□□□ 0.1
CHEK2-212ENST00000425190 PPP4R3CPQ6ZMV5 832 aa15.61■□□□□ 0.09
CHEK2-212ENST00000425190 RNF216Q9NWF9 866 aaPredicted RBP15.51■□□□□ 0.07
CHEK2-212ENST00000425190 CNKSR2Q8WXI2 1034 aa15.49■□□□□ 0.07
CHEK2-212ENST00000425190 DNAJC5BQ9UF47 199 aa15.44■□□□□ 0.06
CHEK2-212ENST00000425190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.02■□□□□ -02e-6■□□□□ 8.5
CHEK2-212ENST00000425190 POTEHQ6S545 545 aa15.01□□□□□ -0.01
CHEK2-212ENST00000425190 NCBP3Q53F19 620 aaKnown RBP14.85□□□□□ -0.03
CHEK2-212ENST00000425190 DSG3P32926 999 aa14.69□□□□□ -0.06
CHEK2-212ENST00000425190 U3KPZ7 1027 aaPredicted RBP14.62□□□□□ -0.07
CHEK2-212ENST00000425190 NPM3O75607 178 aaKnown RBP14.6□□□□□ -0.07
CHEK2-212ENST00000425190 CAPN15O75808 1086 aa14.59□□□□□ -0.07
CHEK2-212ENST00000425190 SPINK5Q9NQ38 1064 aaPredicted RBP14.58□□□□□ -0.08
CHEK2-212ENST00000425190 TRHP20396 242 aaPredicted RBP14.21□□□□□ -0.13
CHEK2-212ENST00000425190 APLP2Q06481 763 aa14.21□□□□□ -0.13
CHEK2-212ENST00000425190 ZNF219Q9P2Y4 722 aaPredicted RBP14.2□□□□□ -0.14
CHEK2-212ENST00000425190 ABCB7O75027 752 aa14.17□□□□□ -0.14
CHEK2-212ENST00000425190 SLC4A2P04920 1241 aa14.11□□□□□ -0.15
CHEK2-212ENST00000425190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.05□□□□□ -0.16
CHEK2-212ENST00000425190 HNRNPUL2Q1KMD3 747 aaKnown RBP14.05□□□□□ -0.16
CHEK2-212ENST00000425190 RBM42Q9BTD8 480 aaKnown RBP14.05□□□□□ -0.16
CHEK2-212ENST00000425190 KCNA4P22459 653 aa14.01□□□□□ -0.17
CHEK2-212ENST00000425190 CHRDL2Q6WN34 429 aa13.97□□□□□ -0.17
CHEK2-212ENST00000425190 SAMD1Q6SPF0 538 aaPredicted RBP13.93□□□□□ -0.18
CHEK2-212ENST00000425190 SP7Q8TDD2 431 aaPredicted RBP13.79□□□□□ -0.2
CHEK2-212ENST00000425190 POLA2Q14181 598 aa13.71□□□□□ -0.21
CHEK2-212ENST00000425190 AKT1S1Q96B36 256 aa13.6□□□□□ -0.23
CHEK2-212ENST00000425190 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
CHEK2-212ENST00000425190 PIP4P2Q8N4L2 257 aa13.49□□□□□ -0.25
CHEK2-212ENST00000425190 REM2Q8IYK8 340 aaPredicted RBP13.45□□□□□ -0.26
CHEK2-212ENST00000425190 HAX1O00165 279 aa13.42□□□□□ -0.26
CHEK2-212ENST00000425190 ZBTB12Q9Y330 459 aaPredicted RBP13.42□□□□□ -0.26
CHEK2-212ENST00000425190 FXR2P51116 673 aaKnown RBP eCLIP13.34□□□□□ -0.27
CHEK2-212ENST00000425190 PITPNM1O00562 1244 aa13.29□□□□□ -0.28
CHEK2-212ENST00000425190 OSCARQ8IYS5 282 aa13.27□□□□□ -0.29
CHEK2-212ENST00000425190 ATF5Q9Y2D1 282 aaPredicted RBP13.24□□□□□ -0.29
CHEK2-212ENST00000425190 EVX2Q03828 476 aa13.19□□□□□ -0.3
CHEK2-212ENST00000425190 SLC4A1APQ9BWU0 796 aaKnown RBP13.19□□□□□ -0.3
CHEK2-212ENST00000425190 FOXD4L1Q9NU39 408 aa13.12□□□□□ -0.31
CHEK2-212ENST00000425190 PRKAR2AP13861 404 aaKnown RBP12.95□□□□□ -0.34
CHEK2-212ENST00000425190 SPDYE2BA6NHP3 402 aa12.94□□□□□ -0.34
CHEK2-212ENST00000425190 SPDYE6P0CI01 402 aa12.94□□□□□ -0.34
CHEK2-212ENST00000425190 SPDYE2Q495Y8 402 aa12.94□□□□□ -0.34
CHEK2-212ENST00000425190 C19orf67A6NJJ6 358 aa12.93□□□□□ -0.34
CHEK2-212ENST00000425190 LHX8Q68G74 356 aa12.93□□□□□ -0.34
CHEK2-212ENST00000425190 ZBTB22O15209 634 aa12.89□□□□□ -0.35
CHEK2-212ENST00000425190 GABBR2O75899 941 aa12.88□□□□□ -0.35
CHEK2-212ENST00000425190 SPDYE1Q8NFV5 336 aaPredicted RBP12.86□□□□□ -0.35
CHEK2-212ENST00000425190 CLEC11AQ9Y240 323 aa12.83□□□□□ -0.36
CHEK2-212ENST00000425190 FBLN2P98095 1184 aa12.8□□□□□ -0.36
CHEK2-212ENST00000425190 ATXN8OSP0DMR3 200 aa12.77□□□□□ -0.37
CHEK2-212ENST00000425190 SSUH2Q9Y2M2 353 aa12.69□□□□□ -0.38
CHEK2-212ENST00000425190 ZNF692Q9BU19 519 aaPredicted RBP12.67□□□□□ -0.38
CHEK2-212ENST00000425190 CHADLQ6NUI6 762 aa12.64□□□□□ -0.39
CHEK2-212ENST00000425190 MKRN4PQ13434 485 aaPredicted RBP12.6□□□□□ -0.39
CHEK2-212ENST00000425190 POTEIP0CG38 1075 aa12.59□□□□□ -0.39
CHEK2-212ENST00000425190 PRR29P0C7W0 189 aa12.57□□□□□ -0.4
CHEK2-212ENST00000425190 PLSCR2Q9NRY7 297 aa12.57□□□□□ -0.4
CHEK2-212ENST00000425190 CLCN6P51797 869 aa12.55□□□□□ -0.4
CHEK2-212ENST00000425190 CD44P16070 742 aaKnown RBP12.5□□□□□ -0.41
CHEK2-212ENST00000425190 PABPN1Q86U42 306 aaKnown RBP eCLIP12.45□□□□□ -0.42
CHEK2-212ENST00000425190 FARP1Q9Y4F1 1045 aaPredicted RBP12.44□□□□□ -0.42
CHEK2-212ENST00000425190 DCBLD2Q96PD2 775 aa12.4□□□□□ -0.42
CHEK2-212ENST00000425190 ZNF579Q8NAF0 562 aaKnown RBP12.3□□□□□ -0.44
CHEK2-212ENST00000425190 OTUD5Q96G74 571 aa12.25□□□□□ -0.45
CHEK2-212ENST00000425190 ZRANB1Q9UGI0 708 aa12.22□□□□□ -0.45
CHEK2-212ENST00000425190 POTEMA6NI47 508 aa12.19□□□□□ -0.46
CHEK2-212ENST00000425190 CSRNP3Q8WYN3 585 aa12.18□□□□□ -0.46
CHEK2-212ENST00000425190 POTEB2H3BUK9 544 aa12.16□□□□□ -0.46
CHEK2-212ENST00000425190 GALR2O43603 387 aaPredicted RBP12.16□□□□□ -0.46
CHEK2-212ENST00000425190 POTEGQ6S5H5 508 aa12.13□□□□□ -0.47
CHEK2-212ENST00000425190 PCDH10Q9P2E7 1040 aa12.11□□□□□ -0.47
CHEK2-212ENST00000425190 CREBZFQ9NS37 354 aa12.1□□□□□ -0.47
CHEK2-212ENST00000425190 STAG3Q9UJ98 1225 aa12.03□□□□□ -0.48
CHEK2-212ENST00000425190 PAK3O75914 559 aaPredicted RBP12.01□□□□□ -0.49
CHEK2-212ENST00000425190 PELP1Q8IZL8 1130 aaKnown RBP11.99□□□□□ -0.49
CHEK2-212ENST00000425190 PHF12Q96QT6 1004 aa11.98□□□□□ -0.49
CHEK2-212ENST00000425190 ASTLQ6HA08 431 aaPredicted RBP11.91□□□□□ -0.5
CHEK2-212ENST00000425190 METRNQ9UJH8 293 aa11.91□□□□□ -0.5
CHEK2-212ENST00000425190 C7P10643 843 aa11.9□□□□□ -0.5
CHEK2-212ENST00000425190 MAMSTRQ6ZN01 415 aa11.9□□□□□ -0.5
CHEK2-212ENST00000425190 NPM1P06748 294 aaKnown RBP eCLIP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms